RNA–Protein interactions for RNA: ENST00000518743.1

HMGB1P23-201, Transcript of high mobility group box 1 pseudogene 23, humanhuman

BASIC

Gene HMGB1P23, Length 568 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P23-201ENST00000518743 GJC1P36383 396 aa4.93□□□□□ -1.62
HMGB1P23-201ENST00000518743 SELENOPP49908 381 aa4.93□□□□□ -1.62
HMGB1P23-201ENST00000518743 UFM1P61960 85 aa4.93□□□□□ -1.62
HMGB1P23-201ENST00000518743 E2F1Q01094 437 aa4.93□□□□□ -1.62
HMGB1P23-201ENST00000518743 DCTN2Q13561 401 aaKnown RBP4.93□□□□□ -1.62
HMGB1P23-201ENST00000518743 CNGA3Q16281 694 aa4.93□□□□□ -1.62
HMGB1P23-201ENST00000518743 GXYLT1Q4G148 440 aa4.93□□□□□ -1.62
HMGB1P23-201ENST00000518743 TIGD2Q4W5G0 525 aa4.93□□□□□ -1.62
HMGB1P23-201ENST00000518743 TAF1BQ53T94 588 aaPredicted RBP4.93□□□□□ -1.62
HMGB1P23-201ENST00000518743 ABHD17BQ5VST6 288 aa4.93□□□□□ -1.62
HMGB1P23-201ENST00000518743 PLPP4Q5VZY2 271 aa4.93□□□□□ -1.62
HMGB1P23-201ENST00000518743 ERICH6BQ5W0A0 696 aa4.93□□□□□ -1.62
HMGB1P23-201ENST00000518743 GPR139Q6DWJ6 353 aa4.93□□□□□ -1.62
HMGB1P23-201ENST00000518743 AADACL2Q6P093 401 aa4.93□□□□□ -1.62
HMGB1P23-201ENST00000518743 Q6ZWC4 215 aa4.93□□□□□ -1.62
HMGB1P23-201ENST00000518743 IKBIPQ70UQ0 350 aa4.93□□□□□ -1.62
HMGB1P23-201ENST00000518743 GSTA5Q7RTV2 222 aa4.93□□□□□ -1.62
HMGB1P23-201ENST00000518743 LAS2Q8IYD9 372 aa4.93□□□□□ -1.62
HMGB1P23-201ENST00000518743 ZNF276Q8N554 614 aa4.93□□□□□ -1.62
HMGB1P23-201ENST00000518743 TTC39CQ8N584 583 aa4.93□□□□□ -1.62
HMGB1P23-201ENST00000518743 ACER1Q8TDN7 264 aa4.93□□□□□ -1.62
HMGB1P23-201ENST00000518743 SLC25A43Q8WUT9 341 aaPredicted RBP4.93□□□□□ -1.62
HMGB1P23-201ENST00000518743 RUFY2Q8WXA3 655 aa4.93□□□□□ -1.62
HMGB1P23-201ENST00000518743 RAB40AQ8WXH6 277 aa4.93□□□□□ -1.62
HMGB1P23-201ENST00000518743 LPIN2Q92539 896 aa4.93□□□□□ -1.62
HMGB1P23-201ENST00000518743 SEPT8Q92599 483 aa4.93□□□□□ -1.62
HMGB1P23-201ENST00000518743 KCNJ9Q92806 393 aa4.93□□□□□ -1.62
HMGB1P23-201ENST00000518743 CASP10Q92851 521 aa4.93□□□□□ -1.62
HMGB1P23-201ENST00000518743 P2RX5Q93086 422 aa4.93□□□□□ -1.62
HMGB1P23-201ENST00000518743 KLHL29Q96CT2 875 aa4.93□□□□□ -1.62
HMGB1P23-201ENST00000518743 ELP4Q96EB1 424 aa4.93□□□□□ -1.62
HMGB1P23-201ENST00000518743 RNFT2Q96EX2 444 aa4.93□□□□□ -1.62
HMGB1P23-201ENST00000518743 SNX18Q96RF0 628 aa4.93□□□□□ -1.62
HMGB1P23-201ENST00000518743 ADOQ96SZ5 270 aa4.93□□□□□ -1.62
HMGB1P23-201ENST00000518743 SLF1Q9BQI6 1058 aa4.93□□□□□ -1.62
HMGB1P23-201ENST00000518743 EDEM2Q9BV94 578 aa4.93□□□□□ -1.62
HMGB1P23-201ENST00000518743 HERC2P3Q9BVR0 1158 aa4.93□□□□□ -1.62
HMGB1P23-201ENST00000518743 TEX101Q9BY14 249 aa4.93□□□□□ -1.62
HMGB1P23-201ENST00000518743 ITPAQ9BY32 194 aa4.93□□□□□ -1.62
HMGB1P23-201ENST00000518743 TRIM4Q9C037 500 aa4.93□□□□□ -1.62
HMGB1P23-201ENST00000518743 DEF6Q9H4E7 631 aa4.93□□□□□ -1.62
HMGB1P23-201ENST00000518743 ZNF703Q9H7S9 590 aaPredicted RBP4.93□□□□□ -1.62
HMGB1P23-201ENST00000518743 BRF2Q9HAW0 419 aa4.93□□□□□ -1.62
HMGB1P23-201ENST00000518743 USP29Q9HBJ7 922 aa4.93□□□□□ -1.62
HMGB1P23-201ENST00000518743 SEMA4BQ9NPR2 832 aaPredicted RBP4.93□□□□□ -1.62
HMGB1P23-201ENST00000518743 SLC22A11Q9NSA0 550 aa4.93□□□□□ -1.62
HMGB1P23-201ENST00000518743 ABHD10Q9NUJ1 306 aa4.93□□□□□ -1.62
HMGB1P23-201ENST00000518743 KCTD5Q9NXV2 234 aa4.93□□□□□ -1.62
HMGB1P23-201ENST00000518743 GAR1Q9NY12 217 aaKnown RBP4.93□□□□□ -1.62
HMGB1P23-201ENST00000518743 ADD3Q9UEY8 706 aaKnown RBP4.93□□□□□ -1.62
HMGB1P23-201ENST00000518743 MAFFQ9ULX9 164 aa4.93□□□□□ -1.62
HMGB1P23-201ENST00000518743 RCE1Q9Y256 329 aa4.93□□□□□ -1.62
HMGB1P23-201ENST00000518743 PCDHB2Q9Y5E7 798 aa4.93□□□□□ -1.62
HMGB1P23-201ENST00000518743 EMSYQ7Z589 1322 aa4.93□□□□□ -1.62
HMGB1P23-201ENST00000518743 SALL3Q9BXA9 1300 aa4.93□□□□□ -1.62
HMGB1P23-201ENST00000518743 ABCA2Q9BZC7 2435 aa4.93□□□□□ -1.62
HMGB1P23-201ENST00000518743 TSC2P49815 1807 aa4.93□□□□□ -1.62
HMGB1P23-201ENST00000518743 hCG_1807616A0A1W2PRN6 198 aa4.92□□□□□ -1.62
HMGB1P23-201ENST00000518743 NPIPB15A6NHN6 443 aaPredicted RBP4.92□□□□□ -1.62
HMGB1P23-201ENST00000518743 MYO1GB0I1T2 1018 aa4.92□□□□□ -1.62
HMGB1P23-201ENST00000518743 QSOX1O00391 747 aa4.92□□□□□ -1.62
HMGB1P23-201ENST00000518743 MUSKO15146 869 aa4.92□□□□□ -1.62
HMGB1P23-201ENST00000518743 BCAT2O15382 392 aaPredicted RBP4.92□□□□□ -1.62
HMGB1P23-201ENST00000518743 P4HA2O15460 535 aa4.92□□□□□ -1.62
HMGB1P23-201ENST00000518743 MLYCDO95822 493 aa4.92□□□□□ -1.62
HMGB1P23-201ENST00000518743 PDHA1P08559 390 aa4.92□□□□□ -1.62
HMGB1P23-201ENST00000518743 C1SP09871 688 aa4.92□□□□□ -1.62
HMGB1P23-201ENST00000518743 AKR1B1P15121 316 aa4.92□□□□□ -1.62
HMGB1P23-201ENST00000518743 ZNF8P17098 575 aaPredicted RBP4.92□□□□□ -1.62
HMGB1P23-201ENST00000518743 NDUFB7P17568 137 aa4.92□□□□□ -1.62
HMGB1P23-201ENST00000518743 GALNSP34059 522 aa4.92□□□□□ -1.62
HMGB1P23-201ENST00000518743 PTGS2P35354 604 aa4.92□□□□□ -1.62
HMGB1P23-201ENST00000518743 HNF1BP35680 557 aa4.92□□□□□ -1.62
HMGB1P23-201ENST00000518743 NNMTP40261 264 aa4.92□□□□□ -1.62
HMGB1P23-201ENST00000518743 FOLR3P41439 243 aa4.92□□□□□ -1.62
HMGB1P23-201ENST00000518743 CLCN2P51788 898 aa4.92□□□□□ -1.62
HMGB1P23-201ENST00000518743 SP2Q02086 613 aa4.92□□□□□ -1.62
HMGB1P23-201ENST00000518743 CFHR3Q02985 330 aa4.92□□□□□ -1.62
HMGB1P23-201ENST00000518743 BYSLQ13895 437 aaKnown RBP4.92□□□□□ -1.62
HMGB1P23-201ENST00000518743 LY6DQ14210 128 aa4.92□□□□□ -1.62
HMGB1P23-201ENST00000518743 PTPN14Q15678 1187 aa4.92□□□□□ -1.62
HMGB1P23-201ENST00000518743 CYP1B1Q16678 543 aa4.92□□□□□ -1.62
HMGB1P23-201ENST00000518743 GSTA3Q16772 222 aa4.92□□□□□ -1.62
HMGB1P23-201ENST00000518743 DUSP28Q4G0W2 176 aa4.92□□□□□ -1.62
HMGB1P23-201ENST00000518743 SPOUT1Q5T280 376 aaKnown RBP4.92□□□□□ -1.62
HMGB1P23-201ENST00000518743 HMBOX1Q6NT76 420 aa4.92□□□□□ -1.62
HMGB1P23-201ENST00000518743 GJB7Q6PEY0 223 aa4.92□□□□□ -1.62
HMGB1P23-201ENST00000518743 NCEH1Q6PIU2 408 aa4.92□□□□□ -1.62
HMGB1P23-201ENST00000518743 ARHGEF19Q8IW93 802 aa4.92□□□□□ -1.62
HMGB1P23-201ENST00000518743 SCN4BQ8IWT1 228 aa4.92□□□□□ -1.62
HMGB1P23-201ENST00000518743 TEX11Q8IYF3 940 aa4.92□□□□□ -1.62
HMGB1P23-201ENST00000518743 SRBD1Q8N5C6 995 aaKnown RBP4.92□□□□□ -1.62
HMGB1P23-201ENST00000518743 BEND2Q8NDZ0 799 aa4.92□□□□□ -1.62
HMGB1P23-201ENST00000518743 DEFB124Q8NES8 71 aa4.92□□□□□ -1.62
HMGB1P23-201ENST00000518743 AKAP1Q92667 903 aaKnown RBP eCLIP4.92□□□□□ -1.62
HMGB1P23-201ENST00000518743 ARHGEF2Q92974 986 aaKnown RBP4.92□□□□□ -1.62
HMGB1P23-201ENST00000518743 KLHL5Q96PQ7 755 aa4.92□□□□□ -1.62
HMGB1P23-201ENST00000518743 ADGRE3Q9BY15 652 aa4.92□□□□□ -1.62
HMGB1P23-201ENST00000518743 SH2D4AQ9H788 454 aa4.92□□□□□ -1.62
HMGB1P23-201ENST00000518743 SAP30LQ9HAJ7 183 aa4.92□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms