RNA–Protein interactions for RNA: ENST00000518385.5

SDC2-202, Transcript of syndecan 2, humanhuman

TSL 5 BASIC

Gene SDC2, Length 1,583 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-202ENST00000518385 ZBTB26Q9HCK0 441 aa18.34■□□□□ 0.53
SDC2-202ENST00000518385 TBCCD1Q9NVR7 557 aa18.34■□□□□ 0.53
SDC2-202ENST00000518385 PIH1D1Q9NWS0 290 aaKnown RBP18.34■□□□□ 0.53
SDC2-202ENST00000518385 INSL5Q9Y5Q6 135 aa18.34■□□□□ 0.53
SDC2-202ENST00000518385 E9PBE3 544 aa18.33■□□□□ 0.52
SDC2-202ENST00000518385 KLHL41O60662 606 aa18.33■□□□□ 0.52
SDC2-202ENST00000518385 LATS1O95835 1130 aa18.33■□□□□ 0.52
SDC2-202ENST00000518385 HMBSP08397 361 aa18.33■□□□□ 0.52
SDC2-202ENST00000518385 ERVK-10P10266 1014 aa18.33■□□□□ 0.52
SDC2-202ENST00000518385 IMPDH2P12268 514 aa18.33■□□□□ 0.52
SDC2-202ENST00000518385 PAMP19021 973 aa18.33■□□□□ 0.52
SDC2-202ENST00000518385 OR1E1P30953 314 aa18.33■□□□□ 0.52
SDC2-202ENST00000518385 RANBP1P43487 201 aa18.33■□□□□ 0.52
SDC2-202ENST00000518385 CDH4P55283 916 aa18.33■□□□□ 0.52
SDC2-202ENST00000518385 ERVK-21P61565 698 aa18.33■□□□□ 0.52
SDC2-202ENST00000518385 TWF1Q12792 350 aa18.33■□□□□ 0.52
SDC2-202ENST00000518385 STX5Q13190 355 aa18.33■□□□□ 0.52
SDC2-202ENST00000518385 PLD1Q13393 1074 aa18.33■□□□□ 0.52
SDC2-202ENST00000518385 NADSYN1Q6IA69 706 aa18.33■□□□□ 0.52
SDC2-202ENST00000518385 DENND5AQ6IQ26 1287 aa18.33■□□□□ 0.52
SDC2-202ENST00000518385 TFAP2DQ7Z6R9 452 aa18.33■□□□□ 0.52
SDC2-202ENST00000518385 STRA8Q7Z7C7 330 aa18.33■□□□□ 0.52
SDC2-202ENST00000518385 KCNMB4Q86W47 210 aa18.33■□□□□ 0.52
SDC2-202ENST00000518385 GOLM1Q8NBJ4 401 aa18.33■□□□□ 0.52
SDC2-202ENST00000518385 IPMKQ8NFU5 416 aa18.33■□□□□ 0.52
SDC2-202ENST00000518385 SPATA22Q8NHS9 363 aa18.33■□□□□ 0.52
SDC2-202ENST00000518385 GABPB2Q8TAK5 448 aaPredicted RBP18.33■□□□□ 0.52
SDC2-202ENST00000518385 ASB9Q96DX5 294 aa18.33■□□□□ 0.52
SDC2-202ENST00000518385 RANBP9Q96S59 729 aa18.33■□□□□ 0.52
SDC2-202ENST00000518385 CDRT15Q96T59 188 aa18.33■□□□□ 0.52
SDC2-202ENST00000518385 MCMBPQ9BTE3 642 aa18.33■□□□□ 0.52
SDC2-202ENST00000518385 FICDQ9BVA6 458 aa18.33■□□□□ 0.52
SDC2-202ENST00000518385 GATA5Q9BWX5 397 aaPredicted RBP18.33■□□□□ 0.52
SDC2-202ENST00000518385 WDR41Q9HAD4 459 aa18.33■□□□□ 0.52
SDC2-202ENST00000518385 UBP1Q9NZI7 540 aa18.33■□□□□ 0.52
SDC2-202ENST00000518385 PTBP2Q9UKA9 531 aaKnown RBP18.33■□□□□ 0.52
SDC2-202ENST00000518385 TLK1Q9UKI8 766 aa18.33■□□□□ 0.52
SDC2-202ENST00000518385 HIDE1A8MVS5 230 aa18.32■□□□□ 0.52
SDC2-202ENST00000518385 AIM2O14862 343 aa18.32■□□□□ 0.52
SDC2-202ENST00000518385 GRM6O15303 877 aa18.32■□□□□ 0.52
SDC2-202ENST00000518385 TOP3BO95985 862 aaKnown RBP18.32■□□□□ 0.52
SDC2-202ENST00000518385 SPATA31D3P0C874 917 aa18.32■□□□□ 0.52
SDC2-202ENST00000518385 ARRB2P32121 409 aa18.32■□□□□ 0.52
SDC2-202ENST00000518385 EPHB3P54753 998 aa18.32■□□□□ 0.52
SDC2-202ENST00000518385 OLIG2Q13516 323 aa18.32■□□□□ 0.52
SDC2-202ENST00000518385 CAMK1Q14012 370 aa18.32■□□□□ 0.52
SDC2-202ENST00000518385 SLC14A2Q15849 920 aa18.32■□□□□ 0.52
SDC2-202ENST00000518385 PLPP4Q5VZY2 271 aa18.32■□□□□ 0.52
SDC2-202ENST00000518385 FSTL4Q6MZW2 842 aa18.32■□□□□ 0.52
SDC2-202ENST00000518385 DHRS4L2Q6PKH6 230 aa18.32■□□□□ 0.52
SDC2-202ENST00000518385 KDELC1Q6UW63 502 aa18.32■□□□□ 0.52
SDC2-202ENST00000518385 HACD2Q6Y1H2 254 aa18.32■□□□□ 0.52
SDC2-202ENST00000518385 SPATA31D4Q6ZUB0 917 aa18.32■□□□□ 0.52
SDC2-202ENST00000518385 ITIH5Q86UX2 942 aa18.32■□□□□ 0.52
SDC2-202ENST00000518385 BBS5Q8N3I7 341 aa18.32■□□□□ 0.52
SDC2-202ENST00000518385 PACRGLQ8N7B6 248 aa18.32■□□□□ 0.52
SDC2-202ENST00000518385 MRGPRX2Q96LB1 330 aa18.32■□□□□ 0.52
SDC2-202ENST00000518385 ZNF597Q96LX8 424 aa18.32■□□□□ 0.52
SDC2-202ENST00000518385 UHRF1Q96T88 793 aaPredicted RBP18.32■□□□□ 0.52
SDC2-202ENST00000518385 GPR22Q99680 433 aa18.32■□□□□ 0.52
SDC2-202ENST00000518385 ATP13A1Q9HD20 1204 aa18.32■□□□□ 0.52
SDC2-202ENST00000518385 CHRAC1Q9NRG0 131 aa18.32■□□□□ 0.52
SDC2-202ENST00000518385 C20orf96Q9NUD7 363 aaPredicted RBP18.32■□□□□ 0.52
SDC2-202ENST00000518385 SARDHQ9UL12 918 aa18.32■□□□□ 0.52
SDC2-202ENST00000518385 YBX2Q9Y2T7 364 aaKnown RBP18.32■□□□□ 0.52
SDC2-202ENST00000518385 PSAT1Q9Y617 370 aa18.32■□□□□ 0.52
SDC2-202ENST00000518385 HSFX4A0A1B0GTS1 333 aaPredicted RBP18.31■□□□□ 0.52
SDC2-202ENST00000518385 A0A1B0GVG6 124 aa18.31■□□□□ 0.52
SDC2-202ENST00000518385 HSFX3A0A1B0GWH4 333 aaPredicted RBP18.31■□□□□ 0.52
SDC2-202ENST00000518385 PRAMEF11O60813 436 aa18.31■□□□□ 0.52
SDC2-202ENST00000518385 CLDN11O75508 207 aa18.31■□□□□ 0.52
SDC2-202ENST00000518385 PGM3O95394 542 aa18.31■□□□□ 0.52
SDC2-202ENST00000518385 MT-CYBP00156 380 aaPredicted RBP18.31■□□□□ 0.52
SDC2-202ENST00000518385 C2P06681 752 aa18.31■□□□□ 0.52
SDC2-202ENST00000518385 CDK9P50750 372 aaKnown RBP18.31■□□□□ 0.52
SDC2-202ENST00000518385 THOP1P52888 689 aa18.31■□□□□ 0.52
SDC2-202ENST00000518385 MYBPC1Q00872 1141 aa18.31■□□□□ 0.52
SDC2-202ENST00000518385 LSM12Q3MHD2 195 aaKnown RBP18.31■□□□□ 0.52
SDC2-202ENST00000518385 SPATS1Q496A3 300 aa18.31■□□□□ 0.52
SDC2-202ENST00000518385 VWA5B1Q5TIE3 1220 aa18.31■□□□□ 0.52
SDC2-202ENST00000518385 CHST9Q7L1S5 443 aa18.31■□□□□ 0.52
SDC2-202ENST00000518385 DNAJB7Q7Z6W7 309 aaPredicted RBP18.31■□□□□ 0.52
SDC2-202ENST00000518385 CNTN4Q8IWV2 1026 aa18.31■□□□□ 0.52
SDC2-202ENST00000518385 LGI2Q8N0V4 545 aa18.31■□□□□ 0.52
SDC2-202ENST00000518385 TERB1Q8NA31 727 aa18.31■□□□□ 0.52
SDC2-202ENST00000518385 TADA1Q96BN2 335 aa18.31■□□□□ 0.52
SDC2-202ENST00000518385 CCDC126Q96EE4 140 aa18.31■□□□□ 0.52
SDC2-202ENST00000518385 MFSD3Q96ES6 412 aa18.31■□□□□ 0.52
SDC2-202ENST00000518385 MAELQ96JY0 434 aaKnown RBP18.31■□□□□ 0.52
SDC2-202ENST00000518385 APOL2Q9BQE5 337 aa18.31■□□□□ 0.52
SDC2-202ENST00000518385 ACE2Q9BYF1 805 aaPredicted RBP18.31■□□□□ 0.52
SDC2-202ENST00000518385 UBAP1Q9NZ09 502 aa18.31■□□□□ 0.52
SDC2-202ENST00000518385 TCAF1Q9Y4C2 921 aa18.31■□□□□ 0.52
SDC2-202ENST00000518385 GBF1Q92538 1859 aa18.31■□□□□ 0.52
SDC2-202ENST00000518385 H3BNC9 293 aa18.3■□□□□ 0.52
SDC2-202ENST00000518385 ACOT8O14734 319 aa18.3■□□□□ 0.52
SDC2-202ENST00000518385 COCHO43405 550 aa18.3■□□□□ 0.52
SDC2-202ENST00000518385 PAPSS2O95340 614 aaPredicted RBP18.3■□□□□ 0.52
SDC2-202ENST00000518385 STAMBPO95630 424 aa18.3■□□□□ 0.52
SDC2-202ENST00000518385 C1RP00736 705 aa18.3■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms