RNA–Protein interactions for RNA: ENST00000470763.1

NPHP4-207, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 3,156 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-207ENST00000470763 DPEP3Q9H4B8 488 aa13.76□□□□□ -0.21
NPHP4-207ENST00000470763 BAG5Q9UL15 447 aa13.76□□□□□ -0.21
NPHP4-207ENST00000470763 NME7Q9Y5B8 376 aa13.76□□□□□ -0.21
NPHP4-207ENST00000470763 ZBBXA8MT70 800 aa13.76□□□□□ -0.21
NPHP4-207ENST00000470763 ACKR2O00590 384 aa13.76□□□□□ -0.21
NPHP4-207ENST00000470763 WNT10BO00744 389 aa13.76□□□□□ -0.21
NPHP4-207ENST00000470763 KPNA6O60684 536 aa13.76□□□□□ -0.21
NPHP4-207ENST00000470763 HUS1O60921 280 aa13.76□□□□□ -0.21
NPHP4-207ENST00000470763 CYP2B6P20813 491 aa13.76□□□□□ -0.21
NPHP4-207ENST00000470763 CRHBPP24387 322 aa13.76□□□□□ -0.21
NPHP4-207ENST00000470763 ARCN1P48444 511 aaKnown RBP13.76□□□□□ -0.21
NPHP4-207ENST00000470763 TUBA3CQ13748 450 aa13.76□□□□□ -0.21
NPHP4-207ENST00000470763 RNF19BQ6ZMZ0 732 aa13.76□□□□□ -0.21
NPHP4-207ENST00000470763 LARP4Q71RC2 724 aaKnown RBP eCLIP13.76□□□□□ -0.21
NPHP4-207ENST00000470763 SLC22A17Q8WUG5 538 aa13.76□□□□□ -0.21
NPHP4-207ENST00000470763 GTF2IRD1Q9UHL9 959 aa13.76□□□□□ -0.21
NPHP4-207ENST00000470763 EVPLQ92817 2033 aa13.76□□□□□ -0.21
NPHP4-207ENST00000470763 COL11A1P12107 1806 aaPredicted RBP13.76□□□□□ -0.21
NPHP4-207ENST00000470763 INMTO95050 263 aa13.75□□□□□ -0.21
NPHP4-207ENST00000470763 HTR1AP08908 422 aa13.75□□□□□ -0.21
NPHP4-207ENST00000470763 C7P10643 843 aa13.75□□□□□ -0.21
NPHP4-207ENST00000470763 PCNAP12004 261 aa13.75□□□□□ -0.21
NPHP4-207ENST00000470763 BMP4P12644 408 aa13.75□□□□□ -0.21
NPHP4-207ENST00000470763 HSD17B1P14061 328 aa13.75□□□□□ -0.21
NPHP4-207ENST00000470763 TCF3P15923 654 aa13.75□□□□□ -0.21
NPHP4-207ENST00000470763 CASP2P42575 452 aa13.75□□□□□ -0.21
NPHP4-207ENST00000470763 IFITM2Q01629 132 aa13.75□□□□□ -0.21
NPHP4-207ENST00000470763 BNIP2Q12982 314 aa13.75□□□□□ -0.21
NPHP4-207ENST00000470763 IER5Q5VY09 327 aa13.75□□□□□ -0.21
NPHP4-207ENST00000470763 CCDC90BQ9GZT6 254 aa13.75□□□□□ -0.21
NPHP4-207ENST00000470763 AKTIPQ9H8T0 292 aa13.75□□□□□ -0.21
NPHP4-207ENST00000470763 EML4Q9HC35 981 aaKnown RBP13.75□□□□□ -0.21
NPHP4-207ENST00000470763 INTS10Q9NVR2 710 aaKnown RBP13.75□□□□□ -0.21
NPHP4-207ENST00000470763 ANAPC2Q9UJX6 822 aa13.75□□□□□ -0.21
NPHP4-207ENST00000470763 FAM72CH0Y354 149 aa13.75□□□□□ -0.21
NPHP4-207ENST00000470763 IPO13O94829 963 aaKnown RBP13.75□□□□□ -0.21
NPHP4-207ENST00000470763 GPIP06744 558 aa13.75□□□□□ -0.21
NPHP4-207ENST00000470763 GSK3BP49841 420 aa13.75□□□□□ -0.21
NPHP4-207ENST00000470763 CDH13P55290 713 aa13.75□□□□□ -0.21
NPHP4-207ENST00000470763 TPD52P55327 224 aaPredicted RBP13.75□□□□□ -0.21
NPHP4-207ENST00000470763 LAMC2Q13753 1193 aa13.75□□□□□ -0.21
NPHP4-207ENST00000470763 MEP1AQ16819 746 aa13.75□□□□□ -0.21
NPHP4-207ENST00000470763 GEN1Q17RS7 908 aa13.75□□□□□ -0.21
NPHP4-207ENST00000470763 ARL13BQ3SXY8 428 aa13.75□□□□□ -0.21
NPHP4-207ENST00000470763 RBM20Q5T481 1227 aaKnown RBP13.75□□□□□ -0.21
NPHP4-207ENST00000470763 ATAD3BQ5T9A4 648 aa13.75□□□□□ -0.21
NPHP4-207ENST00000470763 COL13A1Q5TAT6 717 aaPredicted RBP13.75□□□□□ -0.21
NPHP4-207ENST00000470763 FAM72AQ5TYM5 149 aa13.75□□□□□ -0.21
NPHP4-207ENST00000470763 TMEM236Q5W0B7 351 aa13.75□□□□□ -0.21
NPHP4-207ENST00000470763 KCTD11Q693B1 232 aa13.75□□□□□ -0.21
NPHP4-207ENST00000470763 FAM72DQ6L9T8 149 aa13.75□□□□□ -0.21
NPHP4-207ENST00000470763 LINC00523Q86TU6 105 aa13.75□□□□□ -0.21
NPHP4-207ENST00000470763 FAM72BQ86X60 149 aa13.75□□□□□ -0.21
NPHP4-207ENST00000470763 HOMEZQ8IX15 550 aa13.75□□□□□ -0.21
NPHP4-207ENST00000470763 DEFB106AQ8N104 65 aa13.75□□□□□ -0.21
NPHP4-207ENST00000470763 CLEC4FQ8N1N0 589 aa13.75□□□□□ -0.21
NPHP4-207ENST00000470763 NDNFQ8TB73 568 aa13.75□□□□□ -0.21
NPHP4-207ENST00000470763 LRRC58Q96CX6 371 aa13.75□□□□□ -0.21
NPHP4-207ENST00000470763 OTUD5Q96G74 571 aa13.75□□□□□ -0.21
NPHP4-207ENST00000470763 FAR2Q96K12 515 aa13.75□□□□□ -0.21
NPHP4-207ENST00000470763 CAPNS2Q96L46 248 aa13.75□□□□□ -0.21
NPHP4-207ENST00000470763 TMEM74Q96NL1 305 aa13.75□□□□□ -0.21
NPHP4-207ENST00000470763 PTGES3LE9PB15 166 aa13.75□□□□□ -0.21
NPHP4-207ENST00000470763 EEF2KO00418 725 aaKnown RBP13.75□□□□□ -0.21
NPHP4-207ENST00000470763 SUPT7LO94864 414 aa13.75□□□□□ -0.21
NPHP4-207ENST00000470763 FCGR1AP12314 374 aa13.75□□□□□ -0.21
NPHP4-207ENST00000470763 UBA1P22314 1058 aaKnown RBP13.75□□□□□ -0.21
NPHP4-207ENST00000470763 GSTM2P28161 218 aa13.75□□□□□ -0.21
NPHP4-207ENST00000470763 CLCN3P51790 818 aa13.75□□□□□ -0.21
NPHP4-207ENST00000470763 SLC12A2P55011 1212 aa13.75□□□□□ -0.21
NPHP4-207ENST00000470763 PSMD5Q16401 504 aa13.75□□□□□ -0.21
NPHP4-207ENST00000470763 DPY19L1Q2PZI1 675 aa13.75□□□□□ -0.21
NPHP4-207ENST00000470763 EXT2Q93063 718 aa13.75□□□□□ -0.21
NPHP4-207ENST00000470763 C19orf60Q96EN9 201 aa13.75□□□□□ -0.21
NPHP4-207ENST00000470763 ZBED3Q96IU2 234 aaPredicted RBP13.75□□□□□ -0.21
NPHP4-207ENST00000470763 HOPXQ9BPY8 73 aaPredicted RBP13.75□□□□□ -0.21
NPHP4-207ENST00000470763 ALG2Q9H553 416 aa13.75□□□□□ -0.21
NPHP4-207ENST00000470763 MTPAPQ9NVV4 582 aaKnown RBP eCLIP13.75□□□□□ -0.21
NPHP4-207ENST00000470763 SLC2A6Q9UGQ3 507 aa13.75□□□□□ -0.21
NPHP4-207ENST00000470763 NDUFAF1Q9Y375 327 aa13.75□□□□□ -0.21
NPHP4-207ENST00000470763 H3BMM5 538 aa13.74□□□□□ -0.21
NPHP4-207ENST00000470763 NADKO95544 446 aaPredicted RBP13.74□□□□□ -0.21
NPHP4-207ENST00000470763 UGT2B4P06133 528 aa13.74□□□□□ -0.21
NPHP4-207ENST00000470763 AGXTP21549 392 aa13.74□□□□□ -0.21
NPHP4-207ENST00000470763 ATICP31939 592 aa13.74□□□□□ -0.21
NPHP4-207ENST00000470763 SLC1A2P43004 574 aa13.74□□□□□ -0.21
NPHP4-207ENST00000470763 BCAT1P54687 386 aa13.74□□□□□ -0.21
NPHP4-207ENST00000470763 GRB7Q14451 532 aa13.74□□□□□ -0.21
NPHP4-207ENST00000470763 TMEM132DQ14C87 1099 aa13.74□□□□□ -0.21
NPHP4-207ENST00000470763 ACAP2Q15057 778 aa13.74□□□□□ -0.21
NPHP4-207ENST00000470763 CTF1Q16619 201 aa13.74□□□□□ -0.21
NPHP4-207ENST00000470763 ESRP1Q6NXG1 681 aaKnown RBP13.74□□□□□ -0.21
NPHP4-207ENST00000470763 CATSPER4Q7RTX7 472 aa13.74□□□□□ -0.21
NPHP4-207ENST00000470763 SULF1Q8IWU6 871 aa13.74□□□□□ -0.21
NPHP4-207ENST00000470763 VPS33AQ96AX1 596 aa13.74□□□□□ -0.21
NPHP4-207ENST00000470763 SDCCAG3Q96C92 435 aa13.74□□□□□ -0.21
NPHP4-207ENST00000470763 KCTD14Q9BQ13 255 aaPredicted RBP13.74□□□□□ -0.21
NPHP4-207ENST00000470763 ALOXE3Q9BYJ1 711 aa13.74□□□□□ -0.21
NPHP4-207ENST00000470763 RNF19AQ9NV58 838 aa13.74□□□□□ -0.21
NPHP4-207ENST00000470763 EXD2Q9NVH0 621 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms