RNA–Protein interactions for RNA: ENST00000469529.6

TRAF4-208, Transcript of TNF receptor associated factor 4, humanhuman

TSL 2

Gene TRAF4, Length 788 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-208ENST00000469529 SATB1Q01826 763 aa12.74□□□□□ -0.37
TRAF4-208ENST00000469529 ELP6Q0PNE2 266 aa12.74□□□□□ -0.37
TRAF4-208ENST00000469529 SFSWAPQ12872 951 aaKnown RBP12.74□□□□□ -0.37
TRAF4-208ENST00000469529 THOC5Q13769 683 aaKnown RBP12.74□□□□□ -0.37
TRAF4-208ENST00000469529 SEPT6Q14141 434 aa12.74□□□□□ -0.37
TRAF4-208ENST00000469529 STARD3Q14849 445 aa12.74□□□□□ -0.37
TRAF4-208ENST00000469529 GPR33Q49SQ1 333 aa12.74□□□□□ -0.37
TRAF4-208ENST00000469529 C2orf27AQ580R0 203 aa12.74□□□□□ -0.37
TRAF4-208ENST00000469529 MRNIPQ6NTE8 343 aa12.74□□□□□ -0.37
TRAF4-208ENST00000469529 ERAP2Q6P179 960 aa12.74□□□□□ -0.37
TRAF4-208ENST00000469529 PACS1Q6VY07 963 aa12.74□□□□□ -0.37
TRAF4-208ENST00000469529 LYSMD3Q7Z3D4 306 aa12.74□□□□□ -0.37
TRAF4-208ENST00000469529 BMP8AQ7Z5Y6 402 aa12.74□□□□□ -0.37
TRAF4-208ENST00000469529 CTAGE3PQ8IX95 158 aa12.74□□□□□ -0.37
TRAF4-208ENST00000469529 PPM1NQ8N819 430 aa12.74□□□□□ -0.37
TRAF4-208ENST00000469529 ZNF366Q8N895 744 aa12.74□□□□□ -0.37
TRAF4-208ENST00000469529 OR4K2Q8NGD2 314 aa12.74□□□□□ -0.37
TRAF4-208ENST00000469529 GRIN3AQ8TCU5 1115 aa12.74□□□□□ -0.37
TRAF4-208ENST00000469529 ISL2Q96A47 359 aa12.74□□□□□ -0.37
TRAF4-208ENST00000469529 PBXIP1Q96AQ6 731 aa12.74□□□□□ -0.37
TRAF4-208ENST00000469529 ARRDC3Q96B67 414 aa12.74□□□□□ -0.37
TRAF4-208ENST00000469529 DNAJC1Q96KC8 554 aaKnown RBP12.74□□□□□ -0.37
TRAF4-208ENST00000469529 PLEKHG4BQ96PX9 1271 aa12.74□□□□□ -0.37
TRAF4-208ENST00000469529 SSU72Q9NP77 194 aaKnown RBP12.74□□□□□ -0.37
TRAF4-208ENST00000469529 OGFRQ9NZT2 677 aa12.74□□□□□ -0.37
TRAF4-208ENST00000469529 B4GALT6Q9UBX8 382 aa12.74□□□□□ -0.37
TRAF4-208ENST00000469529 FBXO5Q9UKT4 447 aa12.74□□□□□ -0.37
TRAF4-208ENST00000469529 TRBV5-4A0A0C4DH59 114 aa12.73□□□□□ -0.37
TRAF4-208ENST00000469529 C1orf232A0A0U1RR37 186 aa12.73□□□□□ -0.37
TRAF4-208ENST00000469529 HMX2A2RU54 273 aa12.73□□□□□ -0.37
TRAF4-208ENST00000469529 CCDC162PA2VCL2 907 aa12.73□□□□□ -0.37
TRAF4-208ENST00000469529 ANTXRLA6NF34 631 aa12.73□□□□□ -0.37
TRAF4-208ENST00000469529 KPNA3O00505 521 aaPredicted RBP12.73□□□□□ -0.37
TRAF4-208ENST00000469529 S1PR4O95977 384 aa12.73□□□□□ -0.37
TRAF4-208ENST00000469529 IL1BP01584 269 aa12.73□□□□□ -0.37
TRAF4-208ENST00000469529 AHSGP02765 367 aa12.73□□□□□ -0.37
TRAF4-208ENST00000469529 PRKCGP05129 697 aa12.73□□□□□ -0.37
TRAF4-208ENST00000469529 CTPS1P17812 591 aa12.73□□□□□ -0.37
TRAF4-208ENST00000469529 CD9P21926 228 aa12.73□□□□□ -0.37
TRAF4-208ENST00000469529 GABRB3P28472 473 aa12.73□□□□□ -0.37
TRAF4-208ENST00000469529 MMP12P39900 470 aa12.73□□□□□ -0.37
TRAF4-208ENST00000469529 NEK3P51956 506 aa12.73□□□□□ -0.37
TRAF4-208ENST00000469529 ADARP55265 1226 aaKnown RBP12.73□□□□□ -0.37
TRAF4-208ENST00000469529 DCDC1P59894 354 aa12.73□□□□□ -0.37
TRAF4-208ENST00000469529 RPS14P62263 151 aaKnown RBP12.73□□□□□ -0.37
TRAF4-208ENST00000469529 FAM193AP78312 1265 aa12.73□□□□□ -0.37
TRAF4-208ENST00000469529 PRAMEP78395 509 aa12.73□□□□□ -0.37
TRAF4-208ENST00000469529 FZD5Q13467 585 aa12.73□□□□□ -0.37
TRAF4-208ENST00000469529 AGERQ15109 404 aa12.73□□□□□ -0.37
TRAF4-208ENST00000469529 TYSND1Q2T9J0 566 aa12.73□□□□□ -0.37
TRAF4-208ENST00000469529 TTMPQ5BVD1 217 aa12.73□□□□□ -0.37
TRAF4-208ENST00000469529 ZNF776Q68DI1 518 aaPredicted RBP12.73□□□□□ -0.37
TRAF4-208ENST00000469529 AFTPHQ6ULP2 937 aa12.73□□□□□ -0.37
TRAF4-208ENST00000469529 CERS6Q6ZMG9 384 aa12.73□□□□□ -0.37
TRAF4-208ENST00000469529 SH2D5Q6ZV89 423 aa12.73□□□□□ -0.37
TRAF4-208ENST00000469529 TAOK1Q7L7X3 1001 aa12.73□□□□□ -0.37
TRAF4-208ENST00000469529 CYP2U1Q7Z449 544 aa12.73□□□□□ -0.37
TRAF4-208ENST00000469529 TECPR1Q7Z6L1 1165 aa12.73□□□□□ -0.37
TRAF4-208ENST00000469529 SDCCAG8Q86SQ7 713 aaPredicted RBP12.73□□□□□ -0.37
TRAF4-208ENST00000469529 TRABD2AQ86V40 505 aa12.73□□□□□ -0.37
TRAF4-208ENST00000469529 CILP2Q8IUL8 1156 aa12.73□□□□□ -0.37
TRAF4-208ENST00000469529 MMAAQ8IVH4 418 aaKnown RBP12.73□□□□□ -0.37
TRAF4-208ENST00000469529 NRSN1Q8IZ57 195 aa12.73□□□□□ -0.37
TRAF4-208ENST00000469529 CYP4X1Q8N118 509 aa12.73□□□□□ -0.37
TRAF4-208ENST00000469529 TXNDC5Q8NBS9 432 aaKnown RBP12.73□□□□□ -0.37
TRAF4-208ENST00000469529 OR13C4Q8NGS5 318 aa12.73□□□□□ -0.37
TRAF4-208ENST00000469529 SMIM14Q96QK8 99 aa12.73□□□□□ -0.37
TRAF4-208ENST00000469529 AGAP2Q99490 1192 aa12.73□□□□□ -0.37
TRAF4-208ENST00000469529 RHOJQ9H4E5 214 aa12.73□□□□□ -0.37
TRAF4-208ENST00000469529 PCDH12Q9NPG4 1184 aa12.73□□□□□ -0.37
TRAF4-208ENST00000469529 IL26Q9NPH9 171 aa12.73□□□□□ -0.37
TRAF4-208ENST00000469529 PPANQ9NQ55 473 aaKnown RBP12.73□□□□□ -0.37
TRAF4-208ENST00000469529 IARS2Q9NSE4 1012 aaKnown RBP12.73□□□□□ -0.37
TRAF4-208ENST00000469529 CORO1CQ9ULV4 474 aaPredicted RBP12.73□□□□□ -0.37
TRAF4-208ENST00000469529 MMP17Q9ULZ9 603 aa12.73□□□□□ -0.37
TRAF4-208ENST00000469529 VPS9D1Q9Y2B5 631 aa12.73□□□□□ -0.37
TRAF4-208ENST00000469529 MUC22E2RYF6 1773 aaPredicted RBP12.73□□□□□ -0.37
TRAF4-208ENST00000469529 H3BQF6 201 aa12.72□□□□□ -0.37
TRAF4-208ENST00000469529 PFDN6O15212 129 aa12.72□□□□□ -0.37
TRAF4-208ENST00000469529 CD3EAPO15446 510 aaKnown RBP12.72□□□□□ -0.37
TRAF4-208ENST00000469529 TSPAN6O43657 245 aa12.72□□□□□ -0.37
TRAF4-208ENST00000469529 ATG13O75143 517 aa12.72□□□□□ -0.37
TRAF4-208ENST00000469529 KLF8O95600 359 aaPredicted RBP12.72□□□□□ -0.37
TRAF4-208ENST00000469529 GOT2P00505 430 aaKnown RBP12.72□□□□□ -0.37
TRAF4-208ENST00000469529 ADRB3P13945 408 aa12.72□□□□□ -0.37
TRAF4-208ENST00000469529 BPIP17213 487 aa12.72□□□□□ -0.37
TRAF4-208ENST00000469529 LHCGRP22888 699 aa12.72□□□□□ -0.37
TRAF4-208ENST00000469529 XPAP23025 273 aaPredicted RBP12.72□□□□□ -0.37
TRAF4-208ENST00000469529 FOXN2P32314 431 aa12.72□□□□□ -0.37
TRAF4-208ENST00000469529 PPARGP37231 505 aaPredicted RBP12.72□□□□□ -0.37
TRAF4-208ENST00000469529 SLCO1A2P46721 670 aa12.72□□□□□ -0.37
TRAF4-208ENST00000469529 SPINT3P49223 89 aa12.72□□□□□ -0.37
TRAF4-208ENST00000469529 CSRP3P50461 194 aa12.72□□□□□ -0.37
TRAF4-208ENST00000469529 LIMK2P53671 638 aa12.72□□□□□ -0.37
TRAF4-208ENST00000469529 CACNG1Q06432 222 aa12.72□□□□□ -0.37
TRAF4-208ENST00000469529 RALGDSQ12967 914 aa12.72□□□□□ -0.37
TRAF4-208ENST00000469529 PEX6Q13608 980 aa12.72□□□□□ -0.37
TRAF4-208ENST00000469529 ARHGEF7Q14155 803 aa12.72□□□□□ -0.37
TRAF4-208ENST00000469529 LRRC32Q14392 662 aa12.72□□□□□ -0.37
TRAF4-208ENST00000469529 CST6Q15828 149 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms