RNA–Protein interactions for RNA: ENST00000469080.5

USP11-206, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 1 (best)

Gene USP11, Length 3,467 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-206ENST00000469080 SOBPA7XYQ1 873 aa12.36□□□□□ -0.43
USP11-206ENST00000469080 PRR5-ARHGAP8B1AHC4 643 aa12.36□□□□□ -0.43
USP11-206ENST00000469080 KPNA4O00629 521 aaPredicted RBP12.36□□□□□ -0.43
USP11-206ENST00000469080 TYROBPO43914 113 aa12.36□□□□□ -0.43
USP11-206ENST00000469080 ENO3P13929 434 aaPredicted RBP12.36□□□□□ -0.43
USP11-206ENST00000469080 SPRP35270 261 aaPredicted RBP12.36□□□□□ -0.43
USP11-206ENST00000469080 SLC1A6P48664 564 aa12.36□□□□□ -0.43
USP11-206ENST00000469080 NR2C2P49116 596 aa12.36□□□□□ -0.43
USP11-206ENST00000469080 RAP1GDS1P52306 607 aa12.36□□□□□ -0.43
USP11-206ENST00000469080 CDH13P55290 713 aa12.36□□□□□ -0.43
USP11-206ENST00000469080 ARHGAP8P85298 464 aa12.36□□□□□ -0.43
USP11-206ENST00000469080 SLC10A7Q0GE19 358 aa12.36□□□□□ -0.43
USP11-206ENST00000469080 TEX44Q53QW1 395 aa12.36□□□□□ -0.43
USP11-206ENST00000469080 SCIMPQ6UWF3 145 aa12.36□□□□□ -0.43
USP11-206ENST00000469080 ZNF598Q86UK7 904 aaKnown RBP12.36□□□□□ -0.43
USP11-206ENST00000469080 TMEM173Q86WV6 379 aaPredicted RBP12.36□□□□□ -0.43
USP11-206ENST00000469080 PIAS4Q8N2W9 510 aaPredicted RBP12.36□□□□□ -0.43
USP11-206ENST00000469080 USP13Q92995 863 aaPredicted RBP12.36□□□□□ -0.43
USP11-206ENST00000469080 DCUN1D1Q96GG9 259 aa12.36□□□□□ -0.43
USP11-206ENST00000469080 OXNAD1Q96HP4 312 aaPredicted RBP12.36□□□□□ -0.43
USP11-206ENST00000469080 TRIM39Q9HCM9 518 aa12.36□□□□□ -0.43
USP11-206ENST00000469080 COMMD8Q9NX08 183 aa12.36□□□□□ -0.43
USP11-206ENST00000469080 BCAP29Q9UHQ4 241 aa12.36□□□□□ -0.43
USP11-206ENST00000469080 ATG2BQ96BY7 2078 aa12.35□□□□□ -0.43
USP11-206ENST00000469080 CRCPO75575 148 aa12.35□□□□□ -0.43
USP11-206ENST00000469080 CHRNGP07510 517 aa12.35□□□□□ -0.43
USP11-206ENST00000469080 ARSAP15289 507 aa12.35□□□□□ -0.43
USP11-206ENST00000469080 YWHAQP27348 245 aa12.35□□□□□ -0.43
USP11-206ENST00000469080 ACVRL1P37023 503 aa12.35□□□□□ -0.43
USP11-206ENST00000469080 UBE2UQ5VVX9 321 aa12.35□□□□□ -0.43
USP11-206ENST00000469080 FSTL4Q6MZW2 842 aa12.35□□□□□ -0.43
USP11-206ENST00000469080 SERINC5Q86VE9 423 aa12.35□□□□□ -0.43
USP11-206ENST00000469080 CACUL1Q86Y37 369 aa12.35□□□□□ -0.43
USP11-206ENST00000469080 CADM3Q8N126 398 aa12.35□□□□□ -0.43
USP11-206ENST00000469080 OR52K2Q8NGK3 314 aa12.35□□□□□ -0.43
USP11-206ENST00000469080 TMA16Q96EY4 203 aaKnown RBP12.35□□□□□ -0.43
USP11-206ENST00000469080 EGLN2Q96KS0 407 aa12.35□□□□□ -0.43
USP11-206ENST00000469080 STK39Q9UEW8 545 aa12.35□□□□□ -0.43
USP11-206ENST00000469080 AFF4Q9UHB7 1163 aaKnown RBP12.35□□□□□ -0.43
USP11-206ENST00000469080 DERAQ9Y315 318 aa12.35□□□□□ -0.43
USP11-206ENST00000469080 A0A0C4DFX4 3053 aa12.35□□□□□ -0.43
USP11-206ENST00000469080 TLR5O60602 858 aa12.35□□□□□ -0.43
USP11-206ENST00000469080 MAGEC1O60732 1142 aa12.35□□□□□ -0.43
USP11-206ENST00000469080 TM7SF2O76062 418 aa12.35□□□□□ -0.43
USP11-206ENST00000469080 CRTAMO95727 393 aa12.35□□□□□ -0.43
USP11-206ENST00000469080 C2P06681 752 aa12.35□□□□□ -0.43
USP11-206ENST00000469080 ACRP10323 421 aa12.35□□□□□ -0.43
USP11-206ENST00000469080 HAPLN1P10915 354 aaPredicted RBP12.35□□□□□ -0.43
USP11-206ENST00000469080 PHC1P78364 1004 aa12.35□□□□□ -0.43
USP11-206ENST00000469080 PPP2R2BQ00005 443 aa12.35□□□□□ -0.43
USP11-206ENST00000469080 LRRC73Q5JTD7 316 aa12.35□□□□□ -0.43
USP11-206ENST00000469080 ALKAL1Q6UXT8 129 aa12.35□□□□□ -0.43
USP11-206ENST00000469080 LILRB1Q8NHL6 650 aaPredicted RBP12.35□□□□□ -0.43
USP11-206ENST00000469080 C20orf27Q9GZN8 174 aa12.35□□□□□ -0.43
USP11-206ENST00000469080 CDH19Q9H159 772 aa12.35□□□□□ -0.43
USP11-206ENST00000469080 FANCEQ9HB96 536 aa12.35□□□□□ -0.43
USP11-206ENST00000469080 NUMA1Q14980 2115 aa12.35□□□□□ -0.43
USP11-206ENST00000469080 ERI2A8K979 691 aaKnown RBP12.35□□□□□ -0.43
USP11-206ENST00000469080 ARHGAP33O14559 1287 aa12.35□□□□□ -0.43
USP11-206ENST00000469080 PRSS56P0CW18 603 aa12.35□□□□□ -0.43
USP11-206ENST00000469080 HDCP19113 662 aa12.35□□□□□ -0.43
USP11-206ENST00000469080 PTGS2P35354 604 aa12.35□□□□□ -0.43
USP11-206ENST00000469080 ALDH1A3P47895 512 aa12.35□□□□□ -0.43
USP11-206ENST00000469080 CDONQ4KMG0 1287 aa12.35□□□□□ -0.43
USP11-206ENST00000469080 PPM1LQ5SGD2 360 aa12.35□□□□□ -0.43
USP11-206ENST00000469080 MARC1Q5VT66 337 aa12.35□□□□□ -0.43
USP11-206ENST00000469080 TAS1R1Q7RTX1 841 aa12.35□□□□□ -0.43
USP11-206ENST00000469080 GALNT7Q86SF2 657 aa12.35□□□□□ -0.43
USP11-206ENST00000469080 HMCESQ96FZ2 354 aa12.35□□□□□ -0.43
USP11-206ENST00000469080 VPS39Q96JC1 886 aa12.35□□□□□ -0.43
USP11-206ENST00000469080 UXTQ9UBK9 157 aaPredicted RBP12.35□□□□□ -0.43
USP11-206ENST00000469080 PLLPQ9Y342 182 aa12.35□□□□□ -0.43
USP11-206ENST00000469080 PCDHB5Q9Y5E4 795 aa12.35□□□□□ -0.43
USP11-206ENST00000469080 MGAMO43451 1857 aa12.35□□□□□ -0.43
USP11-206ENST00000469080 TMEM233B4DJY2 109 aa12.34□□□□□ -0.43
USP11-206ENST00000469080 DNAJA2O60884 412 aa12.34□□□□□ -0.43
USP11-206ENST00000469080 F9P00740 461 aa12.34□□□□□ -0.43
USP11-206ENST00000469080 GP5P40197 560 aa12.34□□□□□ -0.43
USP11-206ENST00000469080 GPR141Q7Z602 305 aa12.34□□□□□ -0.43
USP11-206ENST00000469080 CARNMT1Q8N4J0 409 aa12.34□□□□□ -0.43
USP11-206ENST00000469080 ZSCAN18Q8TBC5 510 aaPredicted RBP12.34□□□□□ -0.43
USP11-206ENST00000469080 HCAR2Q8TDS4 363 aa12.34□□□□□ -0.43
USP11-206ENST00000469080 HBEGFQ99075 208 aa12.34□□□□□ -0.43
USP11-206ENST00000469080 SEMA3CQ99985 751 aa12.34□□□□□ -0.43
USP11-206ENST00000469080 GPAMQ9HCL2 828 aa12.34□□□□□ -0.43
USP11-206ENST00000469080 ARPC4-TTLL3A0A0A6YYG9 625 aa12.34□□□□□ -0.43
USP11-206ENST00000469080 MOXD2PA6NHM9 499 aa12.34□□□□□ -0.43
USP11-206ENST00000469080 E9PAM4 449 aa12.34□□□□□ -0.43
USP11-206ENST00000469080 AXIN1O15169 862 aa12.34□□□□□ -0.43
USP11-206ENST00000469080 GPC4O75487 556 aa12.34□□□□□ -0.43
USP11-206ENST00000469080 CYBAP13498 195 aa12.34□□□□□ -0.43
USP11-206ENST00000469080 PGAM1P18669 254 aa12.34□□□□□ -0.43
USP11-206ENST00000469080 ENPEPQ07075 957 aa12.34□□□□□ -0.43
USP11-206ENST00000469080 TMEM198Q66K66 360 aa12.34□□□□□ -0.43
USP11-206ENST00000469080 NAPEPLDQ6IQ20 393 aa12.34□□□□□ -0.43
USP11-206ENST00000469080 OTOP2Q7RTS6 562 aa12.34□□□□□ -0.43
USP11-206ENST00000469080 DCP1BQ8IZD4 617 aaKnown RBP12.34□□□□□ -0.43
USP11-206ENST00000469080 TMEM86AQ8N2M4 240 aa12.34□□□□□ -0.43
USP11-206ENST00000469080 MARVELD2Q8N4S9 558 aa12.34□□□□□ -0.43
USP11-206ENST00000469080 PPHLN1Q8NEY8 458 aaKnown RBP12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms