RNA–Protein interactions for RNA: ENST00000448878.6

CHCHD3-203, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

TSL 5 BASIC

Gene CHCHD3, Length 1,038 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-203ENST00000448878 FAM207AQ9NSI2 230 aaPredicted RBP18■□□□□ 0.47
CHCHD3-203ENST00000448878 SAMSN1Q9NSI8 373 aaKnown RBP18■□□□□ 0.47
CHCHD3-203ENST00000448878 THRAP10827 490 aa17.99■□□□□ 0.47
CHCHD3-203ENST00000448878 CSF2RBP32927 897 aa17.99■□□□□ 0.47
CHCHD3-203ENST00000448878 ADCY8P40145 1251 aa17.99■□□□□ 0.47
CHCHD3-203ENST00000448878 RAB15P59190 212 aa17.99■□□□□ 0.47
CHCHD3-203ENST00000448878 RPL7AP62424 266 aaKnown RBP17.99■□□□□ 0.47
CHCHD3-203ENST00000448878 CDK3Q00526 305 aa17.99■□□□□ 0.47
CHCHD3-203ENST00000448878 CLEC16AQ2KHT3 1053 aa17.99■□□□□ 0.47
CHCHD3-203ENST00000448878 C4orf17Q53FE4 359 aa17.99■□□□□ 0.47
CHCHD3-203ENST00000448878 TMEM71Q6P5X7 295 aa17.99■□□□□ 0.47
CHCHD3-203ENST00000448878 NLGN4XQ8N0W4 816 aa17.99■□□□□ 0.47
CHCHD3-203ENST00000448878 NLGN4YQ8NFZ3 816 aaPredicted RBP17.99■□□□□ 0.47
CHCHD3-203ENST00000448878 PTCD2Q8WV60 388 aaKnown RBP17.99■□□□□ 0.47
CHCHD3-203ENST00000448878 ABHD17AQ96GS6 310 aa17.99■□□□□ 0.47
CHCHD3-203ENST00000448878 SLC45A3Q96JT2 553 aa17.99■□□□□ 0.47
CHCHD3-203ENST00000448878 COQ10AQ96MF6 247 aa17.99■□□□□ 0.47
CHCHD3-203ENST00000448878 PCMTD1Q96MG8 357 aaPredicted RBP17.99■□□□□ 0.47
CHCHD3-203ENST00000448878 SLC38A3Q99624 504 aa17.99■□□□□ 0.47
CHCHD3-203ENST00000448878 DPYSL5Q9BPU6 564 aa17.99■□□□□ 0.47
CHCHD3-203ENST00000448878 TEX101Q9BY14 249 aa17.99■□□□□ 0.47
CHCHD3-203ENST00000448878 GANQ9H2C0 597 aa17.99■□□□□ 0.47
CHCHD3-203ENST00000448878 DHX35Q9H5Z1 703 aaKnown RBP17.99■□□□□ 0.47
CHCHD3-203ENST00000448878 LRRC4CQ9HCJ2 640 aa17.99■□□□□ 0.47
CHCHD3-203ENST00000448878 DACH1Q9UI36 760 aa17.99■□□□□ 0.47
CHCHD3-203ENST00000448878 PLAAQ9Y263 795 aa17.99■□□□□ 0.47
CHCHD3-203ENST00000448878 MAN2B2Q9Y2E5 1009 aa17.99■□□□□ 0.47
CHCHD3-203ENST00000448878 PLEKHM1Q9Y4G2 1056 aa17.99■□□□□ 0.47
CHCHD3-203ENST00000448878 PTPN13Q12923 2485 aa17.99■□□□□ 0.47
CHCHD3-203ENST00000448878 LOC101059948A0A1B0GTJ6 334 aa17.98■□□□□ 0.47
CHCHD3-203ENST00000448878 MAP4P27816 1152 aaKnown RBP17.98■□□□□ 0.47
CHCHD3-203ENST00000448878 ETV3P41162 512 aa17.98■□□□□ 0.47
CHCHD3-203ENST00000448878 RENBPP51606 427 aa17.98■□□□□ 0.47
CHCHD3-203ENST00000448878 NSUN2Q08J23 767 aaKnown RBP eCLIP17.98■□□□□ 0.47
CHCHD3-203ENST00000448878 CDC20Q12834 499 aa17.98■□□□□ 0.47
CHCHD3-203ENST00000448878 SEPT6Q14141 434 aa17.98■□□□□ 0.47
CHCHD3-203ENST00000448878 CNGA3Q16281 694 aa17.98■□□□□ 0.47
CHCHD3-203ENST00000448878 DPCR1Q3MIW9 517 aa17.98■□□□□ 0.47
CHCHD3-203ENST00000448878 TCP11X2Q5H9J9 407 aa17.98■□□□□ 0.47
CHCHD3-203ENST00000448878 ARHGAP36Q6ZRI8 547 aa17.98■□□□□ 0.47
CHCHD3-203ENST00000448878 MARK2Q7KZI7 788 aaKnown RBP17.98■□□□□ 0.47
CHCHD3-203ENST00000448878 FAM26EQ8N5C1 309 aa17.98■□□□□ 0.47
CHCHD3-203ENST00000448878 OR10G6Q8NH81 332 aa17.98■□□□□ 0.47
CHCHD3-203ENST00000448878 APOBEC4Q8WW27 367 aaKnown RBP17.98■□□□□ 0.47
CHCHD3-203ENST00000448878 CNPY3Q9BT09 278 aa17.98■□□□□ 0.47
CHCHD3-203ENST00000448878 EFHD1Q9BUP0 239 aa17.98■□□□□ 0.47
CHCHD3-203ENST00000448878 FRMD8Q9BZ67 464 aaPredicted RBP17.98■□□□□ 0.47
CHCHD3-203ENST00000448878 KCTD5Q9NXV2 234 aa17.98■□□□□ 0.47
CHCHD3-203ENST00000448878 PILRAQ9UKJ1 303 aa17.98■□□□□ 0.47
CHCHD3-203ENST00000448878 AP4E1Q9UPM8 1137 aa17.98■□□□□ 0.47
CHCHD3-203ENST00000448878 PCDHGC4Q9Y5F7 938 aa17.98■□□□□ 0.47
CHCHD3-203ENST00000448878 ARHGEF17Q96PE2 2063 aaPredicted RBP17.98■□□□□ 0.47
CHCHD3-203ENST00000448878 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP17.97■□□□□ 0.47
CHCHD3-203ENST00000448878 BLACEA4D250 179 aa17.97■□□□□ 0.47
CHCHD3-203ENST00000448878 B4E171 279 aa17.97■□□□□ 0.47
CHCHD3-203ENST00000448878 TRAFD1O14545 582 aaPredicted RBP17.97■□□□□ 0.47
CHCHD3-203ENST00000448878 CPP00450 1065 aa17.97■□□□□ 0.47
CHCHD3-203ENST00000448878 TPM2P07951 284 aa17.97■□□□□ 0.47
CHCHD3-203ENST00000448878 NFKBIAP25963 317 aa17.97■□□□□ 0.47
CHCHD3-203ENST00000448878 VIPR1P32241 457 aa17.97■□□□□ 0.47
CHCHD3-203ENST00000448878 MAN1A1P33908 653 aa17.97■□□□□ 0.47
CHCHD3-203ENST00000448878 HTR7P34969 479 aa17.97■□□□□ 0.47
CHCHD3-203ENST00000448878 TSPAN7P41732 249 aa17.97■□□□□ 0.47
CHCHD3-203ENST00000448878 GPR1P46091 355 aa17.97■□□□□ 0.47
CHCHD3-203ENST00000448878 GSCP56915 257 aaPredicted RBP17.97■□□□□ 0.47
CHCHD3-203ENST00000448878 AP1S1P61966 158 aa17.97■□□□□ 0.47
CHCHD3-203ENST00000448878 RFTN1Q14699 578 aaPredicted RBP17.97■□□□□ 0.47
CHCHD3-203ENST00000448878 LACTB2Q53H82 288 aaPredicted RBP17.97■□□□□ 0.47
CHCHD3-203ENST00000448878 PHF13Q86YI8 300 aaPredicted RBP17.97■□□□□ 0.47
CHCHD3-203ENST00000448878 TEFMQ96QE5 360 aaKnown RBP17.97■□□□□ 0.47
CHCHD3-203ENST00000448878 TMEM98Q9Y2Y6 226 aa17.97■□□□□ 0.47
CHCHD3-203ENST00000448878 ST14Q9Y5Y6 855 aa17.97■□□□□ 0.47
CHCHD3-203ENST00000448878 TLN1Q9Y490 2541 aaKnown RBP17.97■□□□□ 0.47
CHCHD3-203ENST00000448878 HEXIM1O94992 359 aaKnown RBP17.96■□□□□ 0.47
CHCHD3-203ENST00000448878 CYP2A6P11509 494 aaPredicted RBP17.96■□□□□ 0.47
CHCHD3-203ENST00000448878 TCN2P20062 427 aa17.96■□□□□ 0.47
CHCHD3-203ENST00000448878 MAPK9P45984 424 aa17.96■□□□□ 0.47
CHCHD3-203ENST00000448878 GPLD1P80108 840 aa17.96■□□□□ 0.47
CHCHD3-203ENST00000448878 IL10RBQ08334 325 aa17.96■□□□□ 0.47
CHCHD3-203ENST00000448878 ZNF235Q14590 738 aa17.96■□□□□ 0.47
CHCHD3-203ENST00000448878 LBRQ14739 615 aaKnown RBP17.96■□□□□ 0.47
CHCHD3-203ENST00000448878 PPP6R3Q5H9R7 873 aaPredicted RBP17.96■□□□□ 0.47
CHCHD3-203ENST00000448878 FKBP15Q5T1M5 1219 aa17.96■□□□□ 0.47
CHCHD3-203ENST00000448878 CEACAM20Q6UY09 585 aa17.96■□□□□ 0.47
CHCHD3-203ENST00000448878 Q6ZVL8 140 aa17.96■□□□□ 0.47
CHCHD3-203ENST00000448878 HSD11B1LQ7Z5J1 315 aa17.96■□□□□ 0.47
CHCHD3-203ENST00000448878 NCSTNQ92542 709 aa17.96■□□□□ 0.47
CHCHD3-203ENST00000448878 RTP4Q96DX8 246 aa17.96■□□□□ 0.47
CHCHD3-203ENST00000448878 NSMCE3Q96MG7 304 aa17.96■□□□□ 0.47
CHCHD3-203ENST00000448878 OR2M4Q96R27 311 aa17.96■□□□□ 0.47
CHCHD3-203ENST00000448878 KLHL3Q9UH77 587 aa17.96■□□□□ 0.47
CHCHD3-203ENST00000448878 PCSK1NQ9UHG2 260 aa17.96■□□□□ 0.47
CHCHD3-203ENST00000448878 CD84Q9UIB8 345 aa17.96■□□□□ 0.47
CHCHD3-203ENST00000448878 PRR19A6NJB7 356 aa17.95■□□□□ 0.46
CHCHD3-203ENST00000448878 IVLP07476 585 aa17.95■□□□□ 0.46
CHCHD3-203ENST00000448878 ERCC2P18074 760 aa17.95■□□□□ 0.46
CHCHD3-203ENST00000448878 EEF1GP26641 437 aaKnown RBP17.95■□□□□ 0.46
CHCHD3-203ENST00000448878 OAS2P29728 719 aaKnown RBP17.95■□□□□ 0.46
CHCHD3-203ENST00000448878 JAM2P57087 298 aa17.95■□□□□ 0.46
CHCHD3-203ENST00000448878 UBE2HP62256 183 aa17.95■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms