RNA–Protein interactions for RNA: ENST00000447155.1

HMGB1P16-201, Transcript of high mobility group box 1 pseudogene 16, humanhuman

BASIC

Gene HMGB1P16, Length 540 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P16-201ENST00000447155 GSTA3Q16772 222 aa4.59□□□□□ -1.67
HMGB1P16-201ENST00000447155 FILIP1LQ4L180 1135 aa4.59□□□□□ -1.67
HMGB1P16-201ENST00000447155 SPATA1Q5VX52 437 aa4.59□□□□□ -1.67
HMGB1P16-201ENST00000447155 NCAPH2Q6IBW4 605 aa4.59□□□□□ -1.67
HMGB1P16-201ENST00000447155 HMBOX1Q6NT76 420 aa4.59□□□□□ -1.67
HMGB1P16-201ENST00000447155 FAM83HQ6ZRV2 1179 aaPredicted RBP4.59□□□□□ -1.67
HMGB1P16-201ENST00000447155 SLC46A3Q7Z3Q1 461 aa4.59□□□□□ -1.67
HMGB1P16-201ENST00000447155 EVC2Q86UK5 1308 aa4.59□□□□□ -1.67
HMGB1P16-201ENST00000447155 IQCA1Q86XH1 822 aa4.59□□□□□ -1.67
HMGB1P16-201ENST00000447155 APLFQ8IW19 511 aaPredicted RBP4.59□□□□□ -1.67
HMGB1P16-201ENST00000447155 CADM4Q8NFZ8 388 aa4.59□□□□□ -1.67
HMGB1P16-201ENST00000447155 PRSS3P2Q8NHM4 247 aa4.59□□□□□ -1.67
HMGB1P16-201ENST00000447155 ATOH1Q92858 354 aaPredicted RBP4.59□□□□□ -1.67
HMGB1P16-201ENST00000447155 ZNF333Q96JL9 665 aa4.59□□□□□ -1.67
HMGB1P16-201ENST00000447155 RUFY1Q96T51 708 aa4.59□□□□□ -1.67
HMGB1P16-201ENST00000447155 BARD1Q99728 777 aaKnown RBP4.59□□□□□ -1.67
HMGB1P16-201ENST00000447155 PIP5K1AQ99755 562 aa4.59□□□□□ -1.67
HMGB1P16-201ENST00000447155 BPIFA3Q9BQP9 254 aa4.59□□□□□ -1.67
HMGB1P16-201ENST00000447155 H2AFJQ9BTM1 129 aa4.59□□□□□ -1.67
HMGB1P16-201ENST00000447155 UPF3BQ9BZI7 483 aaKnown RBP4.59□□□□□ -1.67
HMGB1P16-201ENST00000447155 LRRCC1Q9C099 1032 aa4.59□□□□□ -1.67
HMGB1P16-201ENST00000447155 MUC13Q9H3R2 512 aa4.59□□□□□ -1.67
HMGB1P16-201ENST00000447155 DCTPP1Q9H773 170 aa4.59□□□□□ -1.67
HMGB1P16-201ENST00000447155 NRIP3Q9NQ35 241 aa4.59□□□□□ -1.67
HMGB1P16-201ENST00000447155 HOMER3Q9NSC5 361 aa4.59□□□□□ -1.67
HMGB1P16-201ENST00000447155 UGGT1Q9NYU2 1555 aa4.59□□□□□ -1.67
HMGB1P16-201ENST00000447155 MSRB1Q9NZV6 116 aa4.59□□□□□ -1.67
HMGB1P16-201ENST00000447155 C11orf21Q9P2W6 132 aa4.59□□□□□ -1.67
HMGB1P16-201ENST00000447155 SEL1LQ9UBV2 794 aa4.59□□□□□ -1.67
HMGB1P16-201ENST00000447155 ZMYM2Q9UBW7 1377 aa4.59□□□□□ -1.67
HMGB1P16-201ENST00000447155 LCMT1Q9UIC8 334 aa4.59□□□□□ -1.67
HMGB1P16-201ENST00000447155 CFAP45Q9UL16 551 aa4.59□□□□□ -1.67
HMGB1P16-201ENST00000447155 A4GNTQ9UNA3 340 aa4.59□□□□□ -1.67
HMGB1P16-201ENST00000447155 RAP2CQ9Y3L5 183 aa4.59□□□□□ -1.67
HMGB1P16-201ENST00000447155 PSAT1Q9Y617 370 aa4.59□□□□□ -1.67
HMGB1P16-201ENST00000447155 TULP4Q9NRJ4 1543 aa4.58□□□□□ -1.68
HMGB1P16-201ENST00000447155 A0A0G2JK05 382 aa4.58□□□□□ -1.68
HMGB1P16-201ENST00000447155 GOLGA6L10A6NI86 522 aa4.58□□□□□ -1.68
HMGB1P16-201ENST00000447155 CGB1A6NKQ9 187 aa4.58□□□□□ -1.68
HMGB1P16-201ENST00000447155 PRSS47A8MTI9 375 aa4.58□□□□□ -1.68
HMGB1P16-201ENST00000447155 ADAM10O14672 748 aa4.58□□□□□ -1.68
HMGB1P16-201ENST00000447155 SLC25A17O43808 307 aa4.58□□□□□ -1.68
HMGB1P16-201ENST00000447155 LUC7L3O95232 432 aaKnown RBP4.58□□□□□ -1.68
HMGB1P16-201ENST00000447155 CTPS1P17812 591 aa4.58□□□□□ -1.68
HMGB1P16-201ENST00000447155 SYT1P21579 422 aa4.58□□□□□ -1.68
HMGB1P16-201ENST00000447155 KELP23276 732 aa4.58□□□□□ -1.68
HMGB1P16-201ENST00000447155 GPTP24298 496 aa4.58□□□□□ -1.68
HMGB1P16-201ENST00000447155 ICAM3P32942 547 aa4.58□□□□□ -1.68
HMGB1P16-201ENST00000447155 TNFSF8P32971 234 aa4.58□□□□□ -1.68
HMGB1P16-201ENST00000447155 RFC1P35251 1148 aaPredicted RBP4.58□□□□□ -1.68
HMGB1P16-201ENST00000447155 GCKP35557 465 aa4.58□□□□□ -1.68
HMGB1P16-201ENST00000447155 PRPHP41219 470 aa4.58□□□□□ -1.68
HMGB1P16-201ENST00000447155 TMPOP42166 694 aaKnown RBP4.58□□□□□ -1.68
HMGB1P16-201ENST00000447155 GABRB2P47870 512 aa4.58□□□□□ -1.68
HMGB1P16-201ENST00000447155 EFNA5P52803 228 aa4.58□□□□□ -1.68
HMGB1P16-201ENST00000447155 SH3BGRP55822 239 aaPredicted RBP4.58□□□□□ -1.68
HMGB1P16-201ENST00000447155 GAD2Q05329 585 aa4.58□□□□□ -1.68
HMGB1P16-201ENST00000447155 PRKG2Q13237 762 aa4.58□□□□□ -1.68
HMGB1P16-201ENST00000447155 MAMLD1Q13495 774 aa4.58□□□□□ -1.68
HMGB1P16-201ENST00000447155 VEPH1Q14D04 833 aa4.58□□□□□ -1.68
HMGB1P16-201ENST00000447155 TRIP6Q15654 476 aaKnown RBP4.58□□□□□ -1.68
HMGB1P16-201ENST00000447155 CCNG2Q16589 344 aa4.58□□□□□ -1.68
HMGB1P16-201ENST00000447155 HIST2H2ACQ16777 129 aaPredicted RBP4.58□□□□□ -1.68
HMGB1P16-201ENST00000447155 CEP85LQ5SZL2 805 aa4.58□□□□□ -1.68
HMGB1P16-201ENST00000447155 C10orf25Q5T742 122 aa4.58□□□□□ -1.68
HMGB1P16-201ENST00000447155 ASPHD1Q5U4P2 390 aa4.58□□□□□ -1.68
HMGB1P16-201ENST00000447155 TXNDC8Q6A555 127 aa4.58□□□□□ -1.68
HMGB1P16-201ENST00000447155 ATL3Q6DD88 541 aa4.58□□□□□ -1.68
HMGB1P16-201ENST00000447155 CFAP161Q6P656 301 aa4.58□□□□□ -1.68
HMGB1P16-201ENST00000447155 SYCE2Q6PIF2 218 aa4.58□□□□□ -1.68
HMGB1P16-201ENST00000447155 SLC2A7Q6PXP3 512 aa4.58□□□□□ -1.68
HMGB1P16-201ENST00000447155 CCDC105Q8IYK2 499 aa4.58□□□□□ -1.68
HMGB1P16-201ENST00000447155 CADM3Q8N126 398 aa4.58□□□□□ -1.68
HMGB1P16-201ENST00000447155 LRRC57Q8N9N7 239 aa4.58□□□□□ -1.68
HMGB1P16-201ENST00000447155 KDM1BQ8NB78 822 aa4.58□□□□□ -1.68
HMGB1P16-201ENST00000447155 MCPH1Q8NEM0 835 aa4.58□□□□□ -1.68
HMGB1P16-201ENST00000447155 RASSF8Q8NHQ8 419 aa4.58□□□□□ -1.68
HMGB1P16-201ENST00000447155 FAM76AQ8TAV0 307 aa4.58□□□□□ -1.68
HMGB1P16-201ENST00000447155 MIPOL1Q8TD10 442 aa4.58□□□□□ -1.68
HMGB1P16-201ENST00000447155 PIGOQ8TEQ8 1089 aa4.58□□□□□ -1.68
HMGB1P16-201ENST00000447155 COQ8BQ96D53 544 aa4.58□□□□□ -1.68
HMGB1P16-201ENST00000447155 MSI2Q96DH6 328 aaKnown RBP4.58□□□□□ -1.68
HMGB1P16-201ENST00000447155 DTNBP1Q96EV8 351 aa4.58□□□□□ -1.68
HMGB1P16-201ENST00000447155 ZFYVE19Q96K21 471 aa4.58□□□□□ -1.68
HMGB1P16-201ENST00000447155 CRACR2AQ9BSW2 395 aa4.58□□□□□ -1.68
HMGB1P16-201ENST00000447155 B3GNT4Q9C0J1 378 aa4.58□□□□□ -1.68
HMGB1P16-201ENST00000447155 SLITRK6Q9H5Y7 841 aa4.58□□□□□ -1.68
HMGB1P16-201ENST00000447155 TASP1Q9H6P5 420 aa4.58□□□□□ -1.68
HMGB1P16-201ENST00000447155 WDR6Q9NNW5 1121 aaKnown RBP4.58□□□□□ -1.68
HMGB1P16-201ENST00000447155 TRMT1Q9NXH9 659 aaKnown RBP4.58□□□□□ -1.68
HMGB1P16-201ENST00000447155 NCKIPSDQ9NZQ3 722 aa4.58□□□□□ -1.68
HMGB1P16-201ENST00000447155 PTGFRNQ9P2B2 879 aa4.58□□□□□ -1.68
HMGB1P16-201ENST00000447155 LIMA1Q9UHB6 759 aaKnown RBP4.58□□□□□ -1.68
HMGB1P16-201ENST00000447155 ODF2LQ9ULJ1 636 aa4.58□□□□□ -1.68
HMGB1P16-201ENST00000447155 CARD8Q9Y2G2 431 aa4.58□□□□□ -1.68
HMGB1P16-201ENST00000447155 MAP2P11137 1827 aaKnown RBP4.58□□□□□ -1.68
HMGB1P16-201ENST00000447155 DLC1Q96QB1 1528 aa4.57□□□□□ -1.68
HMGB1P16-201ENST00000447155 ATP10BO94823 1461 aa4.57□□□□□ -1.68
HMGB1P16-201ENST00000447155 KDM6AO15550 1401 aaPredicted RBP4.57□□□□□ -1.68
HMGB1P16-201ENST00000447155 SBNO1A3KN83 1393 aa4.57□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 87.2 ms