RNA–Protein interactions for RNA: ENST00000394224.3

SIPA1-201, Transcript of signal-induced proliferation-associated 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIPA1, Length 3,628 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIPA1-201ENST00000394224 CDK9P50750 372 aaKnown RBP16.74■□□□□ 0.27
SIPA1-201ENST00000394224 PAGE3Q5JUK9 113 aa16.74■□□□□ 0.27
SIPA1-201ENST00000394224 EGFLAMQ63HQ2 1017 aa16.74■□□□□ 0.27
SIPA1-201ENST00000394224 SLC2A7Q6PXP3 512 aa16.74■□□□□ 0.27
SIPA1-201ENST00000394224 NCLNQ969V3 563 aa16.74■□□□□ 0.27
SIPA1-201ENST00000394224 OSBPL6Q9BZF3 934 aa16.74■□□□□ 0.27
SIPA1-201ENST00000394224 IGSF5Q9NSI5 407 aa16.74■□□□□ 0.27
SIPA1-201ENST00000394224 CMTM6Q9NX76 183 aa16.74■□□□□ 0.27
SIPA1-201ENST00000394224 MAP10Q9P2G4 905 aa16.74■□□□□ 0.27
SIPA1-201ENST00000394224 UTS2RQ9UKP6 389 aa16.74■□□□□ 0.27
SIPA1-201ENST00000394224 SH3BP1Q9Y3L3 701 aa16.74■□□□□ 0.27
SIPA1-201ENST00000394224 DNAH14Q0VDD8 3507 aa16.73■□□□□ 0.27
SIPA1-201ENST00000394224 SMIM10L2AP0DMW4 78 aa16.73■□□□□ 0.27
SIPA1-201ENST00000394224 SMIM10L2BP0DMW5 78 aa16.73■□□□□ 0.27
SIPA1-201ENST00000394224 POLR2IP36954 125 aaKnown RBP16.73■□□□□ 0.27
SIPA1-201ENST00000394224 HSPA13P48723 471 aa16.73■□□□□ 0.27
SIPA1-201ENST00000394224 CDK18Q07002 472 aa16.73■□□□□ 0.27
SIPA1-201ENST00000394224 DNASE1L3Q13609 305 aa16.73■□□□□ 0.27
SIPA1-201ENST00000394224 SPIDRQ14159 915 aa16.73■□□□□ 0.27
SIPA1-201ENST00000394224 SQLEQ14534 574 aa16.73■□□□□ 0.27
SIPA1-201ENST00000394224 KCTD11Q693B1 232 aa16.73■□□□□ 0.27
SIPA1-201ENST00000394224 TICAM1Q8IUC6 712 aa16.73■□□□□ 0.27
SIPA1-201ENST00000394224 ERI1Q8IV48 349 aaKnown RBP16.73■□□□□ 0.27
SIPA1-201ENST00000394224 RNF168Q8IYW5 571 aaPredicted RBP16.73■□□□□ 0.27
SIPA1-201ENST00000394224 CRYBG2Q8N1P7 616 aa16.73■□□□□ 0.27
SIPA1-201ENST00000394224 SP110Q9HB58 689 aa16.73■□□□□ 0.27
SIPA1-201ENST00000394224 TMLHEQ9NVH6 421 aa16.73■□□□□ 0.27
SIPA1-201ENST00000394224 SLC27A5Q9Y2P5 690 aa16.73■□□□□ 0.27
SIPA1-201ENST00000394224 TCAF1Q9Y4C2 921 aa16.73■□□□□ 0.27
SIPA1-201ENST00000394224 FSHRP23945 695 aa16.73■□□□□ 0.27
SIPA1-201ENST00000394224 EFEMP1Q12805 493 aa16.73■□□□□ 0.27
SIPA1-201ENST00000394224 FRG1Q14331 258 aaKnown RBP16.73■□□□□ 0.27
SIPA1-201ENST00000394224 FNDC5Q8NAU1 212 aa16.73■□□□□ 0.27
SIPA1-201ENST00000394224 DDHD1Q8NEL9 900 aa16.73■□□□□ 0.27
SIPA1-201ENST00000394224 MYOCQ99972 504 aa16.73■□□□□ 0.27
SIPA1-201ENST00000394224 MROH8Q9H579 483 aa16.73■□□□□ 0.27
SIPA1-201ENST00000394224 A0A087WXM4 84 aa16.72■□□□□ 0.27
SIPA1-201ENST00000394224 CD4P01730 458 aa16.72■□□□□ 0.27
SIPA1-201ENST00000394224 MATN1P21941 496 aa16.72■□□□□ 0.27
SIPA1-201ENST00000394224 EIF2B2P49770 351 aaKnown RBP16.72■□□□□ 0.27
SIPA1-201ENST00000394224 LIPEQ05469 1076 aa16.72■□□□□ 0.27
SIPA1-201ENST00000394224 MADCAM1Q13477 382 aa16.72■□□□□ 0.27
SIPA1-201ENST00000394224 INPP5AQ14642 412 aa16.72■□□□□ 0.27
SIPA1-201ENST00000394224 TSNQ15631 228 aaKnown RBP16.72■□□□□ 0.27
SIPA1-201ENST00000394224 CAMK1DQ8IU85 385 aa16.72■□□□□ 0.27
SIPA1-201ENST00000394224 FNDC8Q8TC99 324 aa16.72■□□□□ 0.27
SIPA1-201ENST00000394224 CASP10Q92851 521 aa16.72■□□□□ 0.27
SIPA1-201ENST00000394224 ZNF597Q96LX8 424 aa16.72■□□□□ 0.27
SIPA1-201ENST00000394224 ITM2CQ9NQX7 267 aa16.72■□□□□ 0.27
SIPA1-201ENST00000394224 GALPQ9UBC7 116 aa16.72■□□□□ 0.27
SIPA1-201ENST00000394224 AAR2Q9Y312 384 aaKnown RBP16.72■□□□□ 0.27
SIPA1-201ENST00000394224 BNIP3LO60238 219 aa16.72■□□□□ 0.27
SIPA1-201ENST00000394224 E2F6O75461 281 aa16.72■□□□□ 0.27
SIPA1-201ENST00000394224 ALBP02768 609 aa16.72■□□□□ 0.27
SIPA1-201ENST00000394224 SNX17Q15036 470 aa16.72■□□□□ 0.27
SIPA1-201ENST00000394224 PGS1Q32NB8 556 aa16.72■□□□□ 0.27
SIPA1-201ENST00000394224 UGT3A1Q6NUS8 523 aa16.72■□□□□ 0.27
SIPA1-201ENST00000394224 TAPT1Q6NXT6 567 aa16.72■□□□□ 0.27
SIPA1-201ENST00000394224 ELMSAN1Q6PJG2 1045 aa16.72■□□□□ 0.27
SIPA1-201ENST00000394224 CARM1Q86X55 608 aa16.72■□□□□ 0.27
SIPA1-201ENST00000394224 THUMPD3Q9BV44 507 aaKnown RBP16.72■□□□□ 0.27
SIPA1-201ENST00000394224 ZFP14Q9HCL3 533 aa16.72■□□□□ 0.27
SIPA1-201ENST00000394224 H3BMQ9 156 aa16.72■□□□□ 0.27
SIPA1-201ENST00000394224 CDC7O00311 574 aa16.72■□□□□ 0.27
SIPA1-201ENST00000394224 NHSL2Q5HYW2 709 aa16.72■□□□□ 0.27
SIPA1-201ENST00000394224 GALNT10Q86SR1 603 aa16.72■□□□□ 0.27
SIPA1-201ENST00000394224 SLC15A4Q8N697 577 aa16.72■□□□□ 0.27
SIPA1-201ENST00000394224 MRGPRX2Q96LB1 330 aa16.72■□□□□ 0.27
SIPA1-201ENST00000394224 COG8Q96MW5 612 aa16.72■□□□□ 0.27
SIPA1-201ENST00000394224 CCDC28BQ9BUN5 200 aa16.72■□□□□ 0.27
SIPA1-201ENST00000394224 TBC1D13Q9NVG8 400 aa16.72■□□□□ 0.27
SIPA1-201ENST00000394224 RNF112Q9ULX5 631 aa16.72■□□□□ 0.27
SIPA1-201ENST00000394224 TMEM247A6NEH6 219 aa16.71■□□□□ 0.27
SIPA1-201ENST00000394224 UPK3BL1B0FP48 263 aa16.71■□□□□ 0.27
SIPA1-201ENST00000394224 UPK3BL2E5RIL1 263 aa16.71■□□□□ 0.27
SIPA1-201ENST00000394224 RHOBTB1O94844 696 aa16.71■□□□□ 0.27
SIPA1-201ENST00000394224 GSNP06396 782 aa16.71■□□□□ 0.27
SIPA1-201ENST00000394224 EFNA1P20827 205 aaPredicted RBP16.71■□□□□ 0.27
SIPA1-201ENST00000394224 SLC26A2P50443 739 aa16.71■□□□□ 0.27
SIPA1-201ENST00000394224 OR4D1Q15615 310 aa16.71■□□□□ 0.27
SIPA1-201ENST00000394224 PSMD5Q16401 504 aa16.71■□□□□ 0.27
SIPA1-201ENST00000394224 ITIH5Q86UX2 942 aa16.71■□□□□ 0.27
SIPA1-201ENST00000394224 GFM2Q969S9 779 aaKnown RBP16.71■□□□□ 0.27
SIPA1-201ENST00000394224 HNRNPABQ99729 332 aaKnown RBP16.71■□□□□ 0.27
SIPA1-201ENST00000394224 PRDM16Q9HAZ2 1276 aa16.71■□□□□ 0.27
SIPA1-201ENST00000394224 PRG3Q9Y2Y8 225 aaPredicted RBP16.71■□□□□ 0.27
SIPA1-201ENST00000394224 MAGEB16A2A368 324 aa16.71■□□□□ 0.27
SIPA1-201ENST00000394224 SLCO1B7G3V0H7 640 aa16.71■□□□□ 0.27
SIPA1-201ENST00000394224 BTN3A1O00481 513 aa16.71■□□□□ 0.27
SIPA1-201ENST00000394224 PIRO00625 290 aa16.71■□□□□ 0.27
SIPA1-201ENST00000394224 ITGB1P05556 798 aa16.71■□□□□ 0.27
SIPA1-201ENST00000394224 IREB2P48200 963 aaKnown RBP16.71■□□□□ 0.27
SIPA1-201ENST00000394224 RAD23AP54725 363 aa16.71■□□□□ 0.27
SIPA1-201ENST00000394224 DCAF4L1Q3SXM0 396 aa16.71■□□□□ 0.27
SIPA1-201ENST00000394224 DENND5AQ6IQ26 1287 aa16.71■□□□□ 0.27
SIPA1-201ENST00000394224 LRRC52Q8N7C0 313 aa16.71■□□□□ 0.27
SIPA1-201ENST00000394224 TIMMDC1Q9NPL8 285 aa16.71■□□□□ 0.27
SIPA1-201ENST00000394224 PTGESO14684 152 aa16.71■□□□□ 0.27
SIPA1-201ENST00000394224 CDK14O94921 469 aa16.71■□□□□ 0.27
SIPA1-201ENST00000394224 DARSP14868 501 aaKnown RBP16.71■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 72.5 ms