RNA–Protein interactions for RNA: ENST00000369462.5

BRCC3-204, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

TSL 1 (best) BASIC

Gene BRCC3, Length 2,846 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-204ENST00000369462 HHIPQ96QV1 700 aa10.94□□□□□ -0.66
BRCC3-204ENST00000369462 CYTH2Q99418 400 aa10.94□□□□□ -0.66
BRCC3-204ENST00000369462 ACSS3Q9H6R3 686 aa10.94□□□□□ -0.66
BRCC3-204ENST00000369462 BCCIPQ9P287 314 aaKnown RBP eCLIP10.94□□□□□ -0.66
BRCC3-204ENST00000369462 SCML1Q9UN30 329 aa10.94□□□□□ -0.66
BRCC3-204ENST00000369462 FADS3Q9Y5Q0 445 aa10.94□□□□□ -0.66
BRCC3-204ENST00000369462 EXOC1LA0A1B0GW35 172 aa10.94□□□□□ -0.66
BRCC3-204ENST00000369462 OR51F1A6NGY5 319 aa10.94□□□□□ -0.66
BRCC3-204ENST00000369462 RPP40O75818 363 aaKnown RBP10.94□□□□□ -0.66
BRCC3-204ENST00000369462 SASH3O75995 380 aa10.94□□□□□ -0.66
BRCC3-204ENST00000369462 HADHAP40939 763 aa10.94□□□□□ -0.66
BRCC3-204ENST00000369462 RPS9P46781 194 aaKnown RBP10.94□□□□□ -0.66
BRCC3-204ENST00000369462 LIG3P49916 1009 aa10.94□□□□□ -0.66
BRCC3-204ENST00000369462 TAS2R38P59533 333 aa10.94□□□□□ -0.66
BRCC3-204ENST00000369462 ACVR1Q04771 509 aa10.94□□□□□ -0.66
BRCC3-204ENST00000369462 MTAPQ13126 283 aa10.94□□□□□ -0.66
BRCC3-204ENST00000369462 EFTUD2Q15029 972 aaKnown RBP eCLIP10.94□□□□□ -0.662e-6■■■■■ 53.4
BRCC3-204ENST00000369462 RFLNAQ6ZTI6 216 aa10.94□□□□□ -0.66
BRCC3-204ENST00000369462 CYS1Q717R9 158 aa10.94□□□□□ -0.66
BRCC3-204ENST00000369462 HSD11B1LQ7Z5J1 315 aa10.94□□□□□ -0.66
BRCC3-204ENST00000369462 PTAR1Q7Z6K3 402 aaPredicted RBP10.94□□□□□ -0.66
BRCC3-204ENST00000369462 FAM124AQ86V42 546 aa10.94□□□□□ -0.66
BRCC3-204ENST00000369462 SPEM1Q8N4L4 309 aa10.94□□□□□ -0.66
BRCC3-204ENST00000369462 TSTD1Q8NFU3 115 aa10.94□□□□□ -0.66
BRCC3-204ENST00000369462 OR14C36Q8NHC7 312 aa10.94□□□□□ -0.66
BRCC3-204ENST00000369462 CD93Q9NPY3 652 aa10.94□□□□□ -0.66
BRCC3-204ENST00000369462 FKBPLQ9UIM3 349 aa10.94□□□□□ -0.66
BRCC3-204ENST00000369462 CCDC162PA2VCL2 907 aa10.93□□□□□ -0.66
BRCC3-204ENST00000369462 CXorf49A8MYA2 514 aaPredicted RBP10.93□□□□□ -0.66
BRCC3-204ENST00000369462 MMP20O60882 483 aa10.93□□□□□ -0.66
BRCC3-204ENST00000369462 PCDH8O95206 1070 aa10.93□□□□□ -0.66
BRCC3-204ENST00000369462 C1SP09871 688 aa10.93□□□□□ -0.66
BRCC3-204ENST00000369462 BPIP17213 487 aa10.93□□□□□ -0.66
BRCC3-204ENST00000369462 STC1P52823 247 aa10.93□□□□□ -0.66
BRCC3-204ENST00000369462 PDPK2PQ6A1A2 396 aa10.93□□□□□ -0.66
BRCC3-204ENST00000369462 Q6ZVL8 140 aa10.93□□□□□ -0.66
BRCC3-204ENST00000369462 AGAP2Q99490 1192 aa10.93□□□□□ -0.66
BRCC3-204ENST00000369462 CCDC77Q9BR77 488 aa10.93□□□□□ -0.66
BRCC3-204ENST00000369462 SMYD2Q9NRG4 433 aa10.93□□□□□ -0.66
BRCC3-204ENST00000369462 ZFATQ9P243 1243 aa10.93□□□□□ -0.66
BRCC3-204ENST00000369462 SLC17A6Q9P2U8 582 aa10.93□□□□□ -0.66
BRCC3-204ENST00000369462 NCKAP1Q9Y2A7 1128 aa10.93□□□□□ -0.66
BRCC3-204ENST00000369462 NFS1Q9Y697 457 aa10.93□□□□□ -0.66
BRCC3-204ENST00000369462 PRR23AA6NEV1 266 aa10.93□□□□□ -0.66
BRCC3-204ENST00000369462 SMIM23A6NLE4 172 aa10.93□□□□□ -0.66
BRCC3-204ENST00000369462 POC1B-GALNT4F8VUJ3 575 aa10.93□□□□□ -0.66
BRCC3-204ENST00000369462 SLC7A4O43246 635 aa10.93□□□□□ -0.66
BRCC3-204ENST00000369462 PI15O43692 258 aa10.93□□□□□ -0.66
BRCC3-204ENST00000369462 C1QAP02745 245 aa10.93□□□□□ -0.66
BRCC3-204ENST00000369462 ETV3P41162 512 aa10.93□□□□□ -0.66
BRCC3-204ENST00000369462 SPINT3P49223 89 aa10.93□□□□□ -0.66
BRCC3-204ENST00000369462 TPMTP51580 245 aa10.93□□□□□ -0.66
BRCC3-204ENST00000369462 MGAT5Q09328 741 aa10.93□□□□□ -0.66
BRCC3-204ENST00000369462 STAT4Q14765 748 aa10.93□□□□□ -0.66
BRCC3-204ENST00000369462 TMEM31Q5JXX7 168 aa10.93□□□□□ -0.66
BRCC3-204ENST00000369462 NEPROQ6NW34 567 aa10.93□□□□□ -0.66
BRCC3-204ENST00000369462 KBTBD6Q86V97 674 aa10.93□□□□□ -0.66
BRCC3-204ENST00000369462 PPM1NQ8N819 430 aa10.93□□□□□ -0.66
BRCC3-204ENST00000369462 PNPLA1Q8N8W4 532 aa10.93□□□□□ -0.66
BRCC3-204ENST00000369462 GPR26Q8NDV2 337 aa10.93□□□□□ -0.66
BRCC3-204ENST00000369462 IL26Q9NPH9 171 aa10.93□□□□□ -0.66
BRCC3-204ENST00000369462 IARS2Q9NSE4 1012 aaKnown RBP10.93□□□□□ -0.66
BRCC3-204ENST00000369462 EBF1Q9UH73 591 aa10.93□□□□□ -0.66
BRCC3-204ENST00000369462 CD84Q9UIB8 345 aa10.93□□□□□ -0.66
BRCC3-204ENST00000369462 TLDC2A0PJX2 215 aa10.92□□□□□ -0.66
BRCC3-204ENST00000369462 FAM47DPA6NHR8 397 aa10.92□□□□□ -0.66
BRCC3-204ENST00000369462 FAM159BA6NKW6 160 aa10.92□□□□□ -0.66
BRCC3-204ENST00000369462 H0Y858 1186 aa10.92□□□□□ -0.66
BRCC3-204ENST00000369462 MAP2K7O14733 419 aa10.92□□□□□ -0.66
BRCC3-204ENST00000369462 GOT2P00505 430 aaKnown RBP10.92□□□□□ -0.66
BRCC3-204ENST00000369462 C7P10643 843 aa10.92□□□□□ -0.66
BRCC3-204ENST00000369462 SLCO1A2P46721 670 aa10.92□□□□□ -0.66
BRCC3-204ENST00000369462 THOC5Q13769 683 aaKnown RBP10.92□□□□□ -0.66
BRCC3-204ENST00000369462 FRG1Q14331 258 aaKnown RBP10.92□□□□□ -0.66
BRCC3-204ENST00000369462 ACOX1Q15067 660 aa10.92□□□□□ -0.66
BRCC3-204ENST00000369462 ALS2CLQ60I27 953 aa10.92□□□□□ -0.66
BRCC3-204ENST00000369462 CWF19L1Q69YN2 538 aaKnown RBP10.92□□□□□ -0.66
BRCC3-204ENST00000369462 FAM151BQ6UXP7 276 aa10.92□□□□□ -0.66
BRCC3-204ENST00000369462 USP30Q70CQ3 517 aa10.92□□□□□ -0.66
BRCC3-204ENST00000369462 RASSF3Q86WH2 238 aa10.92□□□□□ -0.66
BRCC3-204ENST00000369462 LRRC6Q86X45 466 aa10.92□□□□□ -0.66
BRCC3-204ENST00000369462 OR4L1Q8NH43 312 aa10.92□□□□□ -0.66
BRCC3-204ENST00000369462 CXorf40AQ8TE69 158 aa10.92□□□□□ -0.66
BRCC3-204ENST00000369462 CDKL2Q92772 493 aa10.92□□□□□ -0.66
BRCC3-204ENST00000369462 PKD2L2Q9NZM6 624 aa10.92□□□□□ -0.66
BRCC3-204ENST00000369462 COQ6Q9Y2Z9 468 aa10.92□□□□□ -0.66
BRCC3-204ENST00000369462 TSPAN6O43657 245 aa10.92□□□□□ -0.66
BRCC3-204ENST00000369462 AP1G1O43747 822 aa10.92□□□□□ -0.66
BRCC3-204ENST00000369462 F7P08709 466 aaPredicted RBP10.92□□□□□ -0.66
BRCC3-204ENST00000369462 PSMA3P25788 255 aa10.92□□□□□ -0.66
BRCC3-204ENST00000369462 MC4RP32245 332 aa10.92□□□□□ -0.66
BRCC3-204ENST00000369462 MLLT3P42568 568 aaPredicted RBP10.92□□□□□ -0.66
BRCC3-204ENST00000369462 PXNP49023 591 aaPredicted RBP10.92□□□□□ -0.66
BRCC3-204ENST00000369462 SFSWAPQ12872 951 aaKnown RBP10.92□□□□□ -0.66
BRCC3-204ENST00000369462 PEX6Q13608 980 aa10.92□□□□□ -0.66
BRCC3-204ENST00000369462 KLHL38Q2WGJ6 581 aa10.92□□□□□ -0.66
BRCC3-204ENST00000369462 TMEM52BQ4KMG9 183 aa10.92□□□□□ -0.66
BRCC3-204ENST00000369462 ZNF470Q6ECI4 717 aa10.92□□□□□ -0.66
BRCC3-204ENST00000369462 CBARPQ8N350 705 aaPredicted RBP10.92□□□□□ -0.66
BRCC3-204ENST00000369462 OTUD6BQ8N6M0 293 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms