RNA–Protein interactions for RNA: ENST00000368021.7

USF1-203, Transcript of upstream transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USF1, Length 1,807 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-203ENST00000368021 EPHB1P54762 984 aa12.08□□□□□ -0.48
USF1-203ENST00000368021 PRAMEP78395 509 aa12.08□□□□□ -0.48
USF1-203ENST00000368021 ILF2Q12905 390 aaKnown RBP12.08□□□□□ -0.48
USF1-203ENST00000368021 PTPRNQ16849 979 aa12.08□□□□□ -0.48
USF1-203ENST00000368021 MROH9Q5TGP6 573 aa12.08□□□□□ -0.48
USF1-203ENST00000368021 GRAMD4Q6IC98 578 aa12.08□□□□□ -0.48
USF1-203ENST00000368021 NEPROQ6NW34 567 aa12.08□□□□□ -0.48
USF1-203ENST00000368021 DPY19L3Q6ZPD9 716 aa12.08□□□□□ -0.48
USF1-203ENST00000368021 BANPQ8N9N5 519 aa12.08□□□□□ -0.48
USF1-203ENST00000368021 C2CD4AQ8NCU7 369 aaPredicted RBP12.08□□□□□ -0.48
USF1-203ENST00000368021 MDGA1Q8NFP4 955 aa12.08□□□□□ -0.48
USF1-203ENST00000368021 OR6K2Q8NGY2 324 aa12.08□□□□□ -0.48
USF1-203ENST00000368021 MDM1Q8TC05 714 aa12.08□□□□□ -0.48
USF1-203ENST00000368021 PTPRN2Q92932 1015 aa12.08□□□□□ -0.48
USF1-203ENST00000368021 PBXIP1Q96AQ6 731 aa12.08□□□□□ -0.48
USF1-203ENST00000368021 ECHDC3Q96DC8 303 aa12.08□□□□□ -0.48
USF1-203ENST00000368021 SERAC1Q96JX3 654 aa12.08□□□□□ -0.48
USF1-203ENST00000368021 CIPCQ9C0C6 399 aa12.08□□□□□ -0.48
USF1-203ENST00000368021 RHOJQ9H4E5 214 aa12.08□□□□□ -0.48
USF1-203ENST00000368021 HEBP1Q9NRV9 189 aa12.08□□□□□ -0.48
USF1-203ENST00000368021 INTS9Q9NV88 658 aaKnown RBP12.08□□□□□ -0.48
USF1-203ENST00000368021 NLE1Q9NVX2 485 aaPredicted RBP12.08□□□□□ -0.48
USF1-203ENST00000368021 MKS1Q9NXB0 559 aa12.08□□□□□ -0.48
USF1-203ENST00000368021 ELOVL2Q9NXB9 296 aa12.08□□□□□ -0.48
USF1-203ENST00000368021 NKIRAS1Q9NYS0 192 aa12.08□□□□□ -0.48
USF1-203ENST00000368021 GTSE1Q9NYZ3 720 aa12.08□□□□□ -0.48
USF1-203ENST00000368021 SPO11Q9Y5K1 396 aa12.08□□□□□ -0.48
USF1-203ENST00000368021 USP34Q70CQ2 3546 aa12.08□□□□□ -0.48
USF1-203ENST00000368021 COL4A3Q01955 1670 aa12.08□□□□□ -0.48
USF1-203ENST00000368021 KRBA1A5PL33 1030 aa12.07□□□□□ -0.48
USF1-203ENST00000368021 GOLGA8TH3BQL2 631 aa12.07□□□□□ -0.48
USF1-203ENST00000368021 TM9SF1O15321 606 aa12.07□□□□□ -0.48
USF1-203ENST00000368021 MGRN1O60291 552 aa12.07□□□□□ -0.48
USF1-203ENST00000368021 RPP40O75818 363 aaKnown RBP12.07□□□□□ -0.48
USF1-203ENST00000368021 ZWINTO95229 277 aa12.07□□□□□ -0.48
USF1-203ENST00000368021 PIGNO95427 931 aa12.07□□□□□ -0.48
USF1-203ENST00000368021 PIRTP0C851 137 aa12.07□□□□□ -0.48
USF1-203ENST00000368021 LPOP22079 712 aaPredicted RBP12.07□□□□□ -0.48
USF1-203ENST00000368021 CCNFP41002 786 aa12.07□□□□□ -0.48
USF1-203ENST00000368021 RECQLP46063 649 aaPredicted RBP12.07□□□□□ -0.48
USF1-203ENST00000368021 BMPR2Q13873 1038 aa12.07□□□□□ -0.48
USF1-203ENST00000368021 MPP2Q14168 576 aa12.07□□□□□ -0.48
USF1-203ENST00000368021 TBC1D25Q3MII6 688 aa12.07□□□□□ -0.48
USF1-203ENST00000368021 RYBPQ8N488 228 aaPredicted RBP12.07□□□□□ -0.48
USF1-203ENST00000368021 FLCNQ8NFG4 579 aa12.07□□□□□ -0.48
USF1-203ENST00000368021 OR2A12Q8NGT7 310 aa12.07□□□□□ -0.48
USF1-203ENST00000368021 CFAP61Q8NHU2 1237 aa12.07□□□□□ -0.48
USF1-203ENST00000368021 DENND1AQ8TEH3 1009 aa12.07□□□□□ -0.48
USF1-203ENST00000368021 CYB5D2Q8WUJ1 264 aa12.07□□□□□ -0.48
USF1-203ENST00000368021 SCG3Q8WXD2 468 aaKnown RBP12.07□□□□□ -0.48
USF1-203ENST00000368021 HDAC10Q969S8 669 aa12.07□□□□□ -0.48
USF1-203ENST00000368021 DNAJC1Q96KC8 554 aaKnown RBP12.07□□□□□ -0.48
USF1-203ENST00000368021 LYSMD1Q96S90 227 aa12.07□□□□□ -0.48
USF1-203ENST00000368021 NOP53Q9NZM5 478 aaKnown RBP12.07□□□□□ -0.48
USF1-203ENST00000368021 GGT7Q9UJ14 662 aa12.07□□□□□ -0.48
USF1-203ENST00000368021 PPIL1Q9Y3C6 166 aa12.07□□□□□ -0.48
USF1-203ENST00000368021 KCTD3Q9Y597 815 aa12.07□□□□□ -0.48
USF1-203ENST00000368021 F5P12259 2224 aa12.07□□□□□ -0.48
USF1-203ENST00000368021 A0A0J9YYE9 177 aa12.07□□□□□ -0.48
USF1-203ENST00000368021 ENO4A6NNW6 628 aa12.07□□□□□ -0.48
USF1-203ENST00000368021 PALM2-AKAP2B1ALY0 433 aaPredicted RBP12.07□□□□□ -0.48
USF1-203ENST00000368021 ARNTLO00327 626 aa12.07□□□□□ -0.48
USF1-203ENST00000368021 FAM107AO95990 144 aa12.07□□□□□ -0.48
USF1-203ENST00000368021 TRBC1P01850 177 aa12.07□□□□□ -0.48
USF1-203ENST00000368021 ALDOAP04075 364 aaKnown RBP12.07□□□□□ -0.48
USF1-203ENST00000368021 VIMP08670 466 aaKnown RBP12.07□□□□□ -0.48
USF1-203ENST00000368021 PYGBP11216 843 aa12.07□□□□□ -0.48
USF1-203ENST00000368021 LSP1P33241 339 aa12.07□□□□□ -0.48
USF1-203ENST00000368021 HMGCLP35914 325 aa12.07□□□□□ -0.48
USF1-203ENST00000368021 MAGEA12P43365 314 aa12.07□□□□□ -0.48
USF1-203ENST00000368021 SLC6A11P48066 632 aa12.07□□□□□ -0.48
USF1-203ENST00000368021 POLD2P49005 469 aa12.07□□□□□ -0.48
USF1-203ENST00000368021 ARSDP51689 593 aa12.07□□□□□ -0.48
USF1-203ENST00000368021 ST8SIA6P61647 398 aa12.07□□□□□ -0.48
USF1-203ENST00000368021 SLC44A4Q53GD3 710 aa12.07□□□□□ -0.48
USF1-203ENST00000368021 CMPK2Q5EBM0 449 aa12.07□□□□□ -0.48
USF1-203ENST00000368021 TMEM31Q5JXX7 168 aa12.07□□□□□ -0.48
USF1-203ENST00000368021 C1QTNF12Q5T7M4 302 aa12.07□□□□□ -0.48
USF1-203ENST00000368021 ZNF470Q6ECI4 717 aa12.07□□□□□ -0.48
USF1-203ENST00000368021 FSTL4Q6MZW2 842 aa12.07□□□□□ -0.48
USF1-203ENST00000368021 Q6ZVU0 165 aa12.07□□□□□ -0.48
USF1-203ENST00000368021 ARHGAP22Q7Z5H3 698 aa12.07□□□□□ -0.48
USF1-203ENST00000368021 ZC3HC1Q86WB0 502 aaKnown RBP12.07□□□□□ -0.48
USF1-203ENST00000368021 CILP2Q8IUL8 1156 aa12.07□□□□□ -0.48
USF1-203ENST00000368021 PHTF2Q8N3S3 785 aa12.07□□□□□ -0.48
USF1-203ENST00000368021 TERB1Q8NA31 727 aa12.07□□□□□ -0.48
USF1-203ENST00000368021 GPR150Q8NGU9 434 aa12.07□□□□□ -0.48
USF1-203ENST00000368021 APOPT1Q96IL0 206 aa12.07□□□□□ -0.48
USF1-203ENST00000368021 LRIG1Q96JA1 1093 aa12.07□□□□□ -0.48
USF1-203ENST00000368021 VPS39Q96JC1 886 aa12.07□□□□□ -0.48
USF1-203ENST00000368021 GPR22Q99680 433 aa12.07□□□□□ -0.48
USF1-203ENST00000368021 C1QTNF1Q9BXJ1 281 aa12.07□□□□□ -0.48
USF1-203ENST00000368021 SUV39H2Q9H5I1 410 aa12.07□□□□□ -0.48
USF1-203ENST00000368021 CCDC134Q9H6E4 229 aa12.07□□□□□ -0.48
USF1-203ENST00000368021 SLC2A4RGQ9NR83 387 aa12.07□□□□□ -0.48
USF1-203ENST00000368021 WNT16Q9UBV4 365 aa12.07□□□□□ -0.48
USF1-203ENST00000368021 FBXO5Q9UKT4 447 aa12.07□□□□□ -0.48
USF1-203ENST00000368021 PLA2G4CQ9UP65 541 aa12.07□□□□□ -0.48
USF1-203ENST00000368021 BPTFQ12830 3046 aa12.06□□□□□ -0.48
USF1-203ENST00000368021 PRRT4C9JH25 899 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms