RNA–Protein interactions for RNA: ENST00000611132.4

VPS36-207, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 1 (best) BASIC

Gene VPS36, Length 4,607 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-207ENST00000611132 TMEM9Q9P0T7 183 aa14.65□□□□□ -0.06
VPS36-207ENST00000611132 RNASEH2AO75792 299 aaKnown RBP14.65□□□□□ -0.06
VPS36-207ENST00000611132 NCK1P16333 377 aa14.65□□□□□ -0.06
VPS36-207ENST00000611132 DPEP1P16444 411 aa14.65□□□□□ -0.06
VPS36-207ENST00000611132 IDH2P48735 452 aaKnown RBP14.65□□□□□ -0.06
VPS36-207ENST00000611132 ATP6V0D1P61421 351 aa14.65□□□□□ -0.06
VPS36-207ENST00000611132 INTS6LQ5JSJ4 861 aaKnown RBP14.65□□□□□ -0.06
VPS36-207ENST00000611132 TJAP1Q5JTD0 557 aa14.65□□□□□ -0.06
VPS36-207ENST00000611132 GPR158Q5T848 1215 aa14.65□□□□□ -0.06
VPS36-207ENST00000611132 KLHL35Q6PF15 583 aa14.65□□□□□ -0.06
VPS36-207ENST00000611132 RNF19BQ6ZMZ0 732 aa14.65□□□□□ -0.06
VPS36-207ENST00000611132 C19orf18Q8NEA5 215 aa14.65□□□□□ -0.06
VPS36-207ENST00000611132 NDRG1Q92597 394 aaKnown RBP14.65□□□□□ -0.06
VPS36-207ENST00000611132 RBM4BQ9BQ04 359 aaKnown RBP14.65□□□□□ -0.06
VPS36-207ENST00000611132 DHRS4Q9BTZ2 278 aa14.65□□□□□ -0.06
VPS36-207ENST00000611132 RBM4Q9BWF3 364 aaKnown RBP14.65□□□□□ -0.06
VPS36-207ENST00000611132 ADGRE2Q9UHX3 823 aa14.65□□□□□ -0.06
VPS36-207ENST00000611132 DLX3O60479 287 aa14.65□□□□□ -0.06
VPS36-207ENST00000611132 MSCO60682 206 aa14.65□□□□□ -0.06
VPS36-207ENST00000611132 POLR2JP52435 117 aaKnown RBP14.65□□□□□ -0.06
VPS36-207ENST00000611132 OXCT1P55809 520 aa14.65□□□□□ -0.06
VPS36-207ENST00000611132 TPTEP56180 551 aa14.65□□□□□ -0.06
VPS36-207ENST00000611132 ECT2LQ008S8 904 aa14.65□□□□□ -0.06
VPS36-207ENST00000611132 DPY19L2P1Q6NXN4 242 aa14.65□□□□□ -0.06
VPS36-207ENST00000611132 C15orf39Q6ZRI6 1047 aa14.65□□□□□ -0.06
VPS36-207ENST00000611132 LRRC49Q8IUZ0 686 aa14.65□□□□□ -0.06
VPS36-207ENST00000611132 ARL10Q8N8L6 244 aa14.65□□□□□ -0.06
VPS36-207ENST00000611132 GPRC5AQ8NFJ5 357 aa14.65□□□□□ -0.06
VPS36-207ENST00000611132 UBASH3BQ8TF42 649 aa14.65□□□□□ -0.06
VPS36-207ENST00000611132 PPP3R2Q96LZ3 170 aa14.65□□□□□ -0.06
VPS36-207ENST00000611132 SCUBE2Q9NQ36 999 aa14.65□□□□□ -0.06
VPS36-207ENST00000611132 TMCC3Q9ULS5 477 aa14.65□□□□□ -0.06
VPS36-207ENST00000611132 TMEM233B4DJY2 109 aa14.64□□□□□ -0.07
VPS36-207ENST00000611132 ZNF37AP17032 561 aaPredicted RBP14.64□□□□□ -0.07
VPS36-207ENST00000611132 RRM2P31350 389 aa14.64□□□□□ -0.07
VPS36-207ENST00000611132 SEPHS1P49903 392 aa14.64□□□□□ -0.07
VPS36-207ENST00000611132 CEACAM7Q14002 265 aa14.64□□□□□ -0.07
VPS36-207ENST00000611132 NCBP2-AS2Q69YL0 99 aa14.64□□□□□ -0.07
VPS36-207ENST00000611132 LUZP2Q86TE4 346 aa14.64□□□□□ -0.07
VPS36-207ENST00000611132 ERLEC1Q96DZ1 483 aa14.64□□□□□ -0.07
VPS36-207ENST00000611132 OMA1Q96E52 524 aa14.64□□□□□ -0.07
VPS36-207ENST00000611132 SLC47A1Q96FL8 570 aa14.64□□□□□ -0.07
VPS36-207ENST00000611132 TSEN34Q9BSV6 310 aaKnown RBP14.64□□□□□ -0.07
VPS36-207ENST00000611132 ADGRE3Q9BY15 652 aa14.64□□□□□ -0.07
VPS36-207ENST00000611132 POLR1EQ9GZS1 481 aaKnown RBP14.64□□□□□ -0.07
VPS36-207ENST00000611132 SPASTQ9UBP0 616 aa14.64□□□□□ -0.07
VPS36-207ENST00000611132 GTF3C5Q9Y5Q8 519 aaPredicted RBP14.64□□□□□ -0.07
VPS36-207ENST00000611132 STYXL1Q9Y6J8 313 aa14.64□□□□□ -0.07
VPS36-207ENST00000611132 U3KQV3 271 aa14.64□□□□□ -0.07
VPS36-207ENST00000611132 ROBO1Q9Y6N7 1651 aa14.64□□□□□ -0.07
VPS36-207ENST00000611132 SOAT1P35610 550 aa14.64□□□□□ -0.07
VPS36-207ENST00000611132 YAP1P46937 504 aaKnown RBP14.64□□□□□ -0.07
VPS36-207ENST00000611132 ZNF132P52740 706 aa14.64□□□□□ -0.07
VPS36-207ENST00000611132 TBX4P57082 545 aa14.64□□□□□ -0.07
VPS36-207ENST00000611132 CARTPTQ16568 116 aa14.64□□□□□ -0.07
VPS36-207ENST00000611132 NCCRP1Q6ZVX7 275 aaPredicted RBP14.64□□□□□ -0.07
VPS36-207ENST00000611132 GLT6D1Q7Z4J2 308 aa14.64□□□□□ -0.07
VPS36-207ENST00000611132 CENPSQ8N2Z9 138 aa14.64□□□□□ -0.07
VPS36-207ENST00000611132 LPCAT1Q8NF37 534 aa14.64□□□□□ -0.07
VPS36-207ENST00000611132 ENKURQ8TC29 256 aa14.64□□□□□ -0.07
VPS36-207ENST00000611132 OTULINQ96BN8 352 aa14.64□□□□□ -0.07
VPS36-207ENST00000611132 ZNF512Q96ME7 567 aaPredicted RBP14.64□□□□□ -0.07
VPS36-207ENST00000611132 SEPT5Q99719 369 aaPredicted RBP14.64□□□□□ -0.07
VPS36-207ENST00000611132 SLC39A3Q9BRY0 314 aa14.64□□□□□ -0.07
VPS36-207ENST00000611132 PSME2Q9UL46 239 aa14.64□□□□□ -0.07
VPS36-207ENST00000611132 TCAF1Q9Y4C2 921 aa14.64□□□□□ -0.07
VPS36-207ENST00000611132 ZNF142P52746 1687 aaPredicted RBP14.64□□□□□ -0.07
VPS36-207ENST00000611132 HNRNPCL2B2RXH8 293 aa14.64□□□□□ -0.07
VPS36-207ENST00000611132 TOR1BO14657 336 aa14.64□□□□□ -0.07
VPS36-207ENST00000611132 MAGP20916 626 aa14.64□□□□□ -0.07
VPS36-207ENST00000611132 PPP3CCP48454 512 aa14.64□□□□□ -0.07
VPS36-207ENST00000611132 NCF4Q15080 339 aa14.64□□□□□ -0.07
VPS36-207ENST00000611132 CTC1Q2NKJ3 1217 aa14.64□□□□□ -0.07
VPS36-207ENST00000611132 SPDYE7PQ495Y7 208 aa14.64□□□□□ -0.07
VPS36-207ENST00000611132 DENND5AQ6IQ26 1287 aa14.64□□□□□ -0.07
VPS36-207ENST00000611132 NECAB2Q7Z6G3 386 aa14.64□□□□□ -0.07
VPS36-207ENST00000611132 PLD6Q8N2A8 252 aaKnown RBP14.64□□□□□ -0.07
VPS36-207ENST00000611132 SPATA22Q8NHS9 363 aa14.64□□□□□ -0.07
VPS36-207ENST00000611132 ZNF420Q8TAQ5 688 aaPredicted RBP14.64□□□□□ -0.07
VPS36-207ENST00000611132 C18orf25Q96B23 403 aaPredicted RBP14.64□□□□□ -0.07
VPS36-207ENST00000611132 OTUB1Q96FW1 271 aaPredicted RBP14.64□□□□□ -0.07
VPS36-207ENST00000611132 KLQ9UEF7 1012 aa14.64□□□□□ -0.07
VPS36-207ENST00000611132 PNMA8BQ9ULN7 279 aaPredicted RBP14.64□□□□□ -0.07
VPS36-207ENST00000611132 RGPD5Q99666 1765 aa14.64□□□□□ -0.07
VPS36-207ENST00000611132 TULP3O75386 442 aa14.64□□□□□ -0.07
VPS36-207ENST00000611132 ANGPTL1O95841 491 aa14.64□□□□□ -0.07
VPS36-207ENST00000611132 F7P08709 466 aaPredicted RBP14.64□□□□□ -0.07
VPS36-207ENST00000611132 ITGALP20701 1170 aa14.64□□□□□ -0.07
VPS36-207ENST00000611132 BDNFP23560 247 aa14.64□□□□□ -0.07
VPS36-207ENST00000611132 ZNF252P-AS1Q0IIN9 211 aa14.64□□□□□ -0.07
VPS36-207ENST00000611132 HSDL1Q3SXM5 330 aa14.64□□□□□ -0.07
VPS36-207ENST00000611132 TXNDC11Q6PKC3 985 aa14.64□□□□□ -0.07
VPS36-207ENST00000611132 P2RY8Q86VZ1 359 aa14.64□□□□□ -0.07
VPS36-207ENST00000611132 POP5Q969H6 163 aaKnown RBP14.64□□□□□ -0.07
VPS36-207ENST00000611132 BIRC8Q96P09 236 aa14.64□□□□□ -0.07
VPS36-207ENST00000611132 RAPGEFL1Q9UHV5 662 aa14.64□□□□□ -0.07
VPS36-207ENST00000611132 FZD10Q9ULW2 581 aa14.64□□□□□ -0.07
VPS36-207ENST00000611132 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP14.63□□□□□ -0.07
VPS36-207ENST00000611132 SLC12A8A0AV02 714 aa14.63□□□□□ -0.07
VPS36-207ENST00000611132 CASTOR2A6NHX0 329 aa14.63□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms