RNA–Protein interactions for RNA: ENST00000596163.5

SHKBP1-212, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 785 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-212ENST00000596163 CD68P34810 354 aaPredicted RBP17.29■□□□□ 0.36
SHKBP1-212ENST00000596163 BLKP51451 505 aa17.29■□□□□ 0.36
SHKBP1-212ENST00000596163 BNIP3Q12983 259 aa17.29■□□□□ 0.36
SHKBP1-212ENST00000596163 KLF1Q13351 362 aaPredicted RBP17.29■□□□□ 0.36
SHKBP1-212ENST00000596163 MPP3Q13368 585 aa17.29■□□□□ 0.36
SHKBP1-212ENST00000596163 PCSK7Q16549 785 aa17.29■□□□□ 0.36
SHKBP1-212ENST00000596163 LRRC66Q68CR7 880 aa17.29■□□□□ 0.36
SHKBP1-212ENST00000596163 ESRP1Q6NXG1 681 aaKnown RBP17.29■□□□□ 0.36
SHKBP1-212ENST00000596163 PNCKQ6P2M8 343 aa17.29■□□□□ 0.36
SHKBP1-212ENST00000596163 MACC1Q6ZN28 852 aa17.29■□□□□ 0.36
SHKBP1-212ENST00000596163 NLRP8Q86W28 1048 aa17.29■□□□□ 0.36
SHKBP1-212ENST00000596163 NRSN1Q8IZ57 195 aa17.29■□□□□ 0.36
SHKBP1-212ENST00000596163 SPATA22Q8NHS9 363 aa17.29■□□□□ 0.36
SHKBP1-212ENST00000596163 MAIP1Q8WWC4 291 aa17.29■□□□□ 0.36
SHKBP1-212ENST00000596163 LRRC45Q96CN5 670 aa17.29■□□□□ 0.36
SHKBP1-212ENST00000596163 DTD2Q96FN9 168 aa17.29■□□□□ 0.36
SHKBP1-212ENST00000596163 ADAMTS9Q9P2N4 1935 aa17.28■□□□□ 0.36
SHKBP1-212ENST00000596163 RGSL1A5PLK6 1076 aa17.28■□□□□ 0.36
SHKBP1-212ENST00000596163 MT-CYBP00156 380 aaPredicted RBP17.28■□□□□ 0.36
SHKBP1-212ENST00000596163 NME1P15531 152 aaKnown RBP17.28■□□□□ 0.36
SHKBP1-212ENST00000596163 TSHRP16473 764 aa17.28■□□□□ 0.36
SHKBP1-212ENST00000596163 ETV3P41162 512 aa17.28■□□□□ 0.36
SHKBP1-212ENST00000596163 GEMP55040 296 aa17.28■□□□□ 0.36
SHKBP1-212ENST00000596163 PTSQ03393 145 aa17.28■□□□□ 0.36
SHKBP1-212ENST00000596163 NFATC4Q14934 902 aa17.28■□□□□ 0.36
SHKBP1-212ENST00000596163 ANKRD20A2Q5SQ80 823 aa17.28■□□□□ 0.36
SHKBP1-212ENST00000596163 ANKRD20A1Q5TYW2 823 aa17.28■□□□□ 0.36
SHKBP1-212ENST00000596163 ANKRD20A3Q5VUR7 823 aa17.28■□□□□ 0.36
SHKBP1-212ENST00000596163 KDELC2Q7Z4H8 507 aa17.28■□□□□ 0.36
SHKBP1-212ENST00000596163 HSD11B1LQ7Z5J1 315 aa17.28■□□□□ 0.36
SHKBP1-212ENST00000596163 TSPAN33Q86UF1 283 aa17.28■□□□□ 0.36
SHKBP1-212ENST00000596163 GATAD2AQ86YP4 633 aa17.28■□□□□ 0.36
SHKBP1-212ENST00000596163 SLC13A5Q86YT5 568 aaPredicted RBP17.28■□□□□ 0.36
SHKBP1-212ENST00000596163 CAMK1GQ96NX5 476 aa17.28■□□□□ 0.36
SHKBP1-212ENST00000596163 TRIB3Q96RU7 358 aa17.28■□□□□ 0.36
SHKBP1-212ENST00000596163 GBA3Q9H227 469 aa17.28■□□□□ 0.36
SHKBP1-212ENST00000596163 MAGEE1Q9HCI5 957 aa17.28■□□□□ 0.36
SHKBP1-212ENST00000596163 RAD18Q9NS91 495 aa17.28■□□□□ 0.36
SHKBP1-212ENST00000596163 AAR2Q9Y312 384 aaKnown RBP17.28■□□□□ 0.36
SHKBP1-212ENST00000596163 C1orf232A0A0U1RR37 186 aa17.27■□□□□ 0.36
SHKBP1-212ENST00000596163 GOLGA6CA6NDK9 693 aa17.27■□□□□ 0.36
SHKBP1-212ENST00000596163 GOLGA6BA6NDN3 693 aa17.27■□□□□ 0.36
SHKBP1-212ENST00000596163 C5orf60A6NFR6 353 aa17.27■□□□□ 0.36
SHKBP1-212ENST00000596163 GOLGA8CPA6NN73 597 aa17.27■□□□□ 0.36
SHKBP1-212ENST00000596163 GIPC1O14908 333 aa17.27■□□□□ 0.36
SHKBP1-212ENST00000596163 CBFA2T3O75081 653 aa17.27■□□□□ 0.36
SHKBP1-212ENST00000596163 PIAS2O75928 621 aa17.27■□□□□ 0.36
SHKBP1-212ENST00000596163 CLDN7O95471 211 aa17.27■□□□□ 0.36
SHKBP1-212ENST00000596163 GOLGA6DP0CG33 693 aa17.27■□□□□ 0.36
SHKBP1-212ENST00000596163 ALPPL2P10696 532 aa17.27■□□□□ 0.36
SHKBP1-212ENST00000596163 JUNDP17535 347 aa17.27■□□□□ 0.36
SHKBP1-212ENST00000596163 GM2AP17900 193 aa17.27■□□□□ 0.36
SHKBP1-212ENST00000596163 TEAD1P28347 426 aa17.27■□□□□ 0.36
SHKBP1-212ENST00000596163 TRIM23P36406 574 aa17.27■□□□□ 0.36
SHKBP1-212ENST00000596163 STC1P52823 247 aa17.27■□□□□ 0.36
SHKBP1-212ENST00000596163 WNT3AP56704 352 aa17.27■□□□□ 0.36
SHKBP1-212ENST00000596163 KIAA1024LP59773 190 aa17.27■□□□□ 0.36
SHKBP1-212ENST00000596163 SIM1P81133 766 aaPredicted RBP17.27■□□□□ 0.36
SHKBP1-212ENST00000596163 PPARDQ03181 441 aa17.27■□□□□ 0.36
SHKBP1-212ENST00000596163 DPTQ07507 201 aa17.27■□□□□ 0.36
SHKBP1-212ENST00000596163 GALNT3Q14435 633 aa17.27■□□□□ 0.36
SHKBP1-212ENST00000596163 FAXCQ5TGI0 409 aa17.27■□□□□ 0.36
SHKBP1-212ENST00000596163 Q6ZVL8 140 aa17.27■□□□□ 0.36
SHKBP1-212ENST00000596163 ZNF765Q7L2R6 523 aa17.27■□□□□ 0.36
SHKBP1-212ENST00000596163 TECPR1Q7Z6L1 1165 aa17.27■□□□□ 0.36
SHKBP1-212ENST00000596163 GLRX5Q86SX6 157 aa17.27■□□□□ 0.36
SHKBP1-212ENST00000596163 SPATA13Q96N96 652 aa17.27■□□□□ 0.36
SHKBP1-212ENST00000596163 FAM118BQ9BPY3 351 aa17.27■□□□□ 0.36
SHKBP1-212ENST00000596163 SLC13A1Q9BZW2 595 aa17.27■□□□□ 0.36
SHKBP1-212ENST00000596163 WDR26Q9H7D7 661 aa17.27■□□□□ 0.36
SHKBP1-212ENST00000596163 C10orf88Q9H8K7 445 aa17.27■□□□□ 0.36
SHKBP1-212ENST00000596163 PHPT1Q9NRX4 125 aaPredicted RBP17.27■□□□□ 0.36
SHKBP1-212ENST00000596163 GOLGA6AQ9NYA3 693 aa17.27■□□□□ 0.36
SHKBP1-212ENST00000596163 UBP1Q9NZI7 540 aa17.27■□□□□ 0.36
SHKBP1-212ENST00000596163 PKD2L2Q9NZM6 624 aa17.27■□□□□ 0.36
SHKBP1-212ENST00000596163 SPASTQ9UBP0 616 aa17.27■□□□□ 0.36
SHKBP1-212ENST00000596163 FTSJ1Q9UET6 329 aa17.27■□□□□ 0.36
SHKBP1-212ENST00000596163 DMXL1Q9Y485 3027 aa17.26■□□□□ 0.35
SHKBP1-212ENST00000596163 LOC285095A0A1B0GVY8 99 aa17.26■□□□□ 0.35
SHKBP1-212ENST00000596163 TNFSF14O43557 240 aa17.26■□□□□ 0.35
SHKBP1-212ENST00000596163 SDC3O75056 442 aa17.26■□□□□ 0.35
SHKBP1-212ENST00000596163 DGKAP23743 735 aa17.26■□□□□ 0.35
SHKBP1-212ENST00000596163 STIP1P31948 543 aaKnown RBP17.26■□□□□ 0.35
SHKBP1-212ENST00000596163 EIF2B5Q13144 721 aaKnown RBP17.26■□□□□ 0.35
SHKBP1-212ENST00000596163 PTPRRQ15256 657 aa17.26■□□□□ 0.35
SHKBP1-212ENST00000596163 ZNF542PQ5EBM4 170 aa17.26■□□□□ 0.35
SHKBP1-212ENST00000596163 N4BP2L1Q5TBK1 243 aaPredicted RBP17.26■□□□□ 0.35
SHKBP1-212ENST00000596163 RAET1GQ6H3X3 334 aa17.26■□□□□ 0.35
SHKBP1-212ENST00000596163 KDELC1Q6UW63 502 aa17.26■□□□□ 0.35
SHKBP1-212ENST00000596163 ENPP7Q6UWV6 458 aa17.26■□□□□ 0.35
SHKBP1-212ENST00000596163 EID2Q8N6I1 236 aa17.26■□□□□ 0.35
SHKBP1-212ENST00000596163 PLA2G15Q8NCC3 412 aa17.26■□□□□ 0.35
SHKBP1-212ENST00000596163 SLC35B2Q8TB61 432 aa17.26■□□□□ 0.35
SHKBP1-212ENST00000596163 AP2M1Q96CW1 435 aa17.26■□□□□ 0.35
SHKBP1-212ENST00000596163 TBATAQ96M53 351 aa17.26■□□□□ 0.35
SHKBP1-212ENST00000596163 WDR92Q96MX6 357 aa17.26■□□□□ 0.35
SHKBP1-212ENST00000596163 FSD1LQ9BXM9 530 aa17.26■□□□□ 0.35
SHKBP1-212ENST00000596163 GPR63Q9BZJ6 419 aa17.26■□□□□ 0.35
SHKBP1-212ENST00000596163 CDH19Q9H159 772 aa17.26■□□□□ 0.35
SHKBP1-212ENST00000596163 ZFYVE1Q9HBF4 777 aa17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms