RNA–Protein interactions for RNA: ENST00000578172.1

NDEL1-204, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

Gene NDEL1, Length 3,927 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-204ENST00000578172 MAFKO60675 156 aa13.67□□□□□ -0.22
NDEL1-204ENST00000578172 TRIM16O95361 564 aa13.67□□□□□ -0.22
NDEL1-204ENST00000578172 GLDCP23378 1020 aa13.67□□□□□ -0.22
NDEL1-204ENST00000578172 RENBPP51606 427 aa13.67□□□□□ -0.22
NDEL1-204ENST00000578172 KIAA1841Q6NSI8 718 aa13.67□□□□□ -0.22
NDEL1-204ENST00000578172 FNDC5Q8NAU1 212 aa13.67□□□□□ -0.22
NDEL1-204ENST00000578172 SLC2A13Q96QE2 648 aa13.67□□□□□ -0.22
NDEL1-204ENST00000578172 C1orf21Q9H246 121 aa13.67□□□□□ -0.22
NDEL1-204ENST00000578172 AKTIPQ9H8T0 292 aa13.67□□□□□ -0.22
NDEL1-204ENST00000578172 ABCC13Q9NSE7 274 aa13.67□□□□□ -0.22
NDEL1-204ENST00000578172 U3KQV3 271 aa13.67□□□□□ -0.22
NDEL1-204ENST00000578172 COL1A2P08123 1366 aa13.67□□□□□ -0.22
NDEL1-204ENST00000578172 GPR182O15218 404 aa13.67□□□□□ -0.22
NDEL1-204ENST00000578172 MATN3O15232 486 aa13.67□□□□□ -0.22
NDEL1-204ENST00000578172 SBK3P0C264 359 aa13.67□□□□□ -0.22
NDEL1-204ENST00000578172 DNAJB2P25686 324 aa13.67□□□□□ -0.22
NDEL1-204ENST00000578172 KBTBD6Q86V97 674 aa13.67□□□□□ -0.22
NDEL1-204ENST00000578172 CLEC4FQ8N1N0 589 aa13.67□□□□□ -0.22
NDEL1-204ENST00000578172 FBXO39Q8N4B4 442 aa13.67□□□□□ -0.22
NDEL1-204ENST00000578172 TSPAN14Q8NG11 270 aa13.67□□□□□ -0.22
NDEL1-204ENST00000578172 ZNHIT2Q9UHR6 403 aa13.67□□□□□ -0.22
NDEL1-204ENST00000578172 CCDC162PA2VCL2 907 aa13.67□□□□□ -0.22
NDEL1-204ENST00000578172 GMNNO75496 209 aa13.67□□□□□ -0.22
NDEL1-204ENST00000578172 TMED10P49755 219 aaKnown RBP13.67□□□□□ -0.22
NDEL1-204ENST00000578172 IFNLR1Q8IU57 520 aaPredicted RBP13.67□□□□□ -0.22
NDEL1-204ENST00000578172 GFM2Q969S9 779 aaKnown RBP13.67□□□□□ -0.22
NDEL1-204ENST00000578172 C19orf60Q96EN9 201 aa13.67□□□□□ -0.22
NDEL1-204ENST00000578172 TRAPPC9Q96Q05 1148 aa13.67□□□□□ -0.22
NDEL1-204ENST00000578172 CCSER2Q9H7U1 834 aa13.67□□□□□ -0.22
NDEL1-204ENST00000578172 SPAG4Q9NPE6 437 aa13.67□□□□□ -0.22
NDEL1-204ENST00000578172 NDUFAF1Q9Y375 327 aa13.67□□□□□ -0.22
NDEL1-204ENST00000578172 TCAF2A6NFQ2 919 aa13.66□□□□□ -0.22
NDEL1-204ENST00000578172 CDC7O00311 574 aa13.66□□□□□ -0.22
NDEL1-204ENST00000578172 PLOD2O00469 737 aa13.66□□□□□ -0.22
NDEL1-204ENST00000578172 TMCC1O94876 653 aa13.66□□□□□ -0.22
NDEL1-204ENST00000578172 KCNE1P15382 129 aa13.66□□□□□ -0.22
NDEL1-204ENST00000578172 PRDX3P30048 256 aaKnown RBP13.66□□□□□ -0.22
NDEL1-204ENST00000578172 CDC42EP1Q00587 391 aa13.66□□□□□ -0.22
NDEL1-204ENST00000578172 NAB1Q13506 487 aa13.66□□□□□ -0.22
NDEL1-204ENST00000578172 ZNF423Q2M1K9 1284 aa13.66□□□□□ -0.22
NDEL1-204ENST00000578172 ARMC12Q5T9G4 340 aa13.66□□□□□ -0.22
NDEL1-204ENST00000578172 KLHDC10Q6PID8 442 aa13.66□□□□□ -0.22
NDEL1-204ENST00000578172 PAQR3Q6TCH7 311 aa13.66□□□□□ -0.22
NDEL1-204ENST00000578172 IGSF8Q969P0 613 aa13.66□□□□□ -0.22
NDEL1-204ENST00000578172 PPP1R10Q96QC0 940 aaKnown RBP13.66□□□□□ -0.22
NDEL1-204ENST00000578172 VAT1Q99536 393 aa13.66□□□□□ -0.22
NDEL1-204ENST00000578172 KATNAL1Q9BW62 490 aa13.66□□□□□ -0.22
NDEL1-204ENST00000578172 LATS2Q9NRM7 1088 aa13.66□□□□□ -0.22
NDEL1-204ENST00000578172 PTPRFP10586 1907 aa13.66□□□□□ -0.22
NDEL1-204ENST00000578172 MGAMO43451 1857 aa13.66□□□□□ -0.22
NDEL1-204ENST00000578172 KANSL1LA0AUZ9 987 aa13.66□□□□□ -0.22
NDEL1-204ENST00000578172 GSTA4O15217 222 aa13.66□□□□□ -0.22
NDEL1-204ENST00000578172 ZBTB11O95625 1053 aaPredicted RBP13.66□□□□□ -0.22
NDEL1-204ENST00000578172 IL10P22301 178 aa13.66□□□□□ -0.22
NDEL1-204ENST00000578172 AXLP30530 894 aa13.66□□□□□ -0.22
NDEL1-204ENST00000578172 MCCD1P59942 119 aaPredicted RBP13.66□□□□□ -0.22
NDEL1-204ENST00000578172 MYLK3Q32MK0 819 aa13.66□□□□□ -0.22
NDEL1-204ENST00000578172 LRRC73Q5JTD7 316 aa13.66□□□□□ -0.22
NDEL1-204ENST00000578172 LDLRAP1Q5SW96 308 aa13.66□□□□□ -0.22
NDEL1-204ENST00000578172 DENND1CQ8IV53 801 aa13.66□□□□□ -0.22
NDEL1-204ENST00000578172 FBXO30Q8TB52 745 aa13.66□□□□□ -0.22
NDEL1-204ENST00000578172 SPPL2BQ8TCT7 592 aa13.66□□□□□ -0.22
NDEL1-204ENST00000578172 GKN1Q9NS71 199 aa13.66□□□□□ -0.22
NDEL1-204ENST00000578172 OSER1Q9NX31 292 aa13.66□□□□□ -0.22
NDEL1-204ENST00000578172 NSMCE4AQ9NXX6 385 aa13.66□□□□□ -0.22
NDEL1-204ENST00000578172 NIPSNAP2O75323 286 aa13.66□□□□□ -0.22
NDEL1-204ENST00000578172 E2F6O75461 281 aa13.66□□□□□ -0.22
NDEL1-204ENST00000578172 TNFAIP8O95379 198 aa13.66□□□□□ -0.22
NDEL1-204ENST00000578172 CHRNA1P02708 482 aa13.66□□□□□ -0.22
NDEL1-204ENST00000578172 GNAO1P09471 354 aa13.66□□□□□ -0.22
NDEL1-204ENST00000578172 EFNA1P20827 205 aaPredicted RBP13.66□□□□□ -0.22
NDEL1-204ENST00000578172 ARNTP27540 789 aa13.66□□□□□ -0.22
NDEL1-204ENST00000578172 SIRPB2Q5JXA9 342 aa13.66□□□□□ -0.22
NDEL1-204ENST00000578172 TSTD2Q5T7W7 516 aa13.66□□□□□ -0.22
NDEL1-204ENST00000578172 TMEM214Q6NUQ4 689 aaKnown RBP13.66□□□□□ -0.22
NDEL1-204ENST00000578172 SETD3Q86TU7 594 aaPredicted RBP13.66□□□□□ -0.22
NDEL1-204ENST00000578172 ARHGAP12Q8IWW6 846 aa13.66□□□□□ -0.22
NDEL1-204ENST00000578172 PCYOX1LQ8NBM8 494 aa13.66□□□□□ -0.22
NDEL1-204ENST00000578172 TWIST2Q8WVJ9 160 aa13.66□□□□□ -0.22
NDEL1-204ENST00000578172 GPR21Q99679 349 aa13.66□□□□□ -0.22
NDEL1-204ENST00000578172 THUMPD3Q9BV44 507 aaKnown RBP13.66□□□□□ -0.22
NDEL1-204ENST00000578172 EXD2Q9NVH0 621 aa13.66□□□□□ -0.22
NDEL1-204ENST00000578172 MKS1Q9NXB0 559 aa13.66□□□□□ -0.22
NDEL1-204ENST00000578172 VTI1BQ9UEU0 232 aa13.66□□□□□ -0.22
NDEL1-204ENST00000578172 ARID2Q68CP9 1835 aa13.66□□□□□ -0.22
NDEL1-204ENST00000578172 SDK1Q7Z5N4 2213 aa13.65□□□□□ -0.22
NDEL1-204ENST00000578172 CD3EAPO15446 510 aaKnown RBP13.65□□□□□ -0.22
NDEL1-204ENST00000578172 STAU1O95793 577 aaKnown RBP13.65□□□□□ -0.22
NDEL1-204ENST00000578172 RBP1P09455 135 aa13.65□□□□□ -0.22
NDEL1-204ENST00000578172 RPL5P46777 297 aaKnown RBP13.65□□□□□ -0.22
NDEL1-204ENST00000578172 KCNK10P57789 538 aa13.65□□□□□ -0.22
NDEL1-204ENST00000578172 POU4F1Q01851 419 aa13.65□□□□□ -0.22
NDEL1-204ENST00000578172 C18orf21Q32NC0 220 aaPredicted RBP13.65□□□□□ -0.22
NDEL1-204ENST00000578172 ALKAL1Q6UXT8 129 aa13.65□□□□□ -0.22
NDEL1-204ENST00000578172 GLT6D1Q7Z4J2 308 aa13.65□□□□□ -0.22
NDEL1-204ENST00000578172 KLHDC9Q8NEP7 349 aa13.65□□□□□ -0.22
NDEL1-204ENST00000578172 CALML6Q8TD86 181 aa13.65□□□□□ -0.22
NDEL1-204ENST00000578172 FIG4Q92562 907 aa13.65□□□□□ -0.22
NDEL1-204ENST00000578172 TSPAN17Q96FV3 270 aa13.65□□□□□ -0.22
NDEL1-204ENST00000578172 RMND5BQ96G75 393 aaPredicted RBP13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms