RNA–Protein interactions for RNA: ENST00000477561.5

HDAC6-221, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 764 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-221ENST00000477561 FAM221BA6H8Z2 402 aa8.29□□□□□ -1.08
HDAC6-221ENST00000477561 NEMP2A6NFY4 417 aa8.29□□□□□ -1.08
HDAC6-221ENST00000477561 NPIPB15A6NHN6 443 aaPredicted RBP8.29□□□□□ -1.08
HDAC6-221ENST00000477561 MIF4GDA9UHW6 222 aaKnown RBP8.29□□□□□ -1.08
HDAC6-221ENST00000477561 K7ESM1 405 aa8.29□□□□□ -1.08
HDAC6-221ENST00000477561 CES2O00748 559 aa8.29□□□□□ -1.08
HDAC6-221ENST00000477561 FANCGO15287 622 aa8.29□□□□□ -1.08
HDAC6-221ENST00000477561 AQP9O43315 295 aa8.29□□□□□ -1.08
HDAC6-221ENST00000477561 GCATO75600 419 aa8.29□□□□□ -1.08
HDAC6-221ENST00000477561 RFPL3O75679 317 aa8.29□□□□□ -1.08
HDAC6-221ENST00000477561 HEXIM1O94992 359 aaKnown RBP8.29□□□□□ -1.08
HDAC6-221ENST00000477561 SLU7O95391 586 aaKnown RBP8.29□□□□□ -1.08
HDAC6-221ENST00000477561 FTCDO95954 541 aa8.29□□□□□ -1.08
HDAC6-221ENST00000477561 PROS1P07225 676 aa8.29□□□□□ -1.08
HDAC6-221ENST00000477561 CELA2BP08218 269 aaPredicted RBP8.29□□□□□ -1.08
HDAC6-221ENST00000477561 ALPPL2P10696 532 aa8.29□□□□□ -1.08
HDAC6-221ENST00000477561 CYP2A6P11509 494 aaPredicted RBP8.29□□□□□ -1.08
HDAC6-221ENST00000477561 LHCGRP22888 699 aa8.29□□□□□ -1.08
HDAC6-221ENST00000477561 VIPR1P32241 457 aa8.29□□□□□ -1.08
HDAC6-221ENST00000477561 HNF1BP35680 557 aa8.29□□□□□ -1.08
HDAC6-221ENST00000477561 ETV3P41162 512 aa8.29□□□□□ -1.08
HDAC6-221ENST00000477561 CDKN2BP42772 138 aa8.29□□□□□ -1.08
HDAC6-221ENST00000477561 TUBB4BP68371 445 aa8.29□□□□□ -1.08
HDAC6-221ENST00000477561 PPARDQ03181 441 aa8.29□□□□□ -1.08
HDAC6-221ENST00000477561 ADCY2Q08462 1091 aa8.29□□□□□ -1.08
HDAC6-221ENST00000477561 ZBTB17Q13105 803 aa8.29□□□□□ -1.08
HDAC6-221ENST00000477561 ZNF211Q13398 564 aaPredicted RBP8.29□□□□□ -1.08
HDAC6-221ENST00000477561 ALG11Q2TAA5 492 aa8.29□□□□□ -1.08
HDAC6-221ENST00000477561 PRRT3Q5FWE3 981 aa8.29□□□□□ -1.08
HDAC6-221ENST00000477561 RALGPS1Q5JS13 557 aa8.29□□□□□ -1.08
HDAC6-221ENST00000477561 KCTD16Q68DU8 428 aa8.29□□□□□ -1.08
HDAC6-221ENST00000477561 CCNI2Q6ZMN8 369 aaPredicted RBP8.29□□□□□ -1.08
HDAC6-221ENST00000477561 SPOCD1Q6ZMY3 1216 aa8.29□□□□□ -1.08
HDAC6-221ENST00000477561 MACC1Q6ZN28 852 aa8.29□□□□□ -1.08
HDAC6-221ENST00000477561 RFLNAQ6ZTI6 216 aa8.29□□□□□ -1.08
HDAC6-221ENST00000477561 TMPRSS7Q7RTY8 843 aa8.29□□□□□ -1.08
HDAC6-221ENST00000477561 HSD11B1LQ7Z5J1 315 aa8.29□□□□□ -1.08
HDAC6-221ENST00000477561 CCDC50Q8IVM0 306 aa8.29□□□□□ -1.08
HDAC6-221ENST00000477561 PHACTR4Q8IZ21 702 aa8.29□□□□□ -1.08
HDAC6-221ENST00000477561 UBL4BQ8N7F7 174 aa8.29□□□□□ -1.08
HDAC6-221ENST00000477561 CNTD1Q8N815 330 aa8.29□□□□□ -1.08
HDAC6-221ENST00000477561 MNS1Q8NEH6 495 aa8.29□□□□□ -1.08
HDAC6-221ENST00000477561 ARRDC2Q8TBH0 407 aa8.29□□□□□ -1.08
HDAC6-221ENST00000477561 PIH1D2Q8WWB5 315 aa8.29□□□□□ -1.08
HDAC6-221ENST00000477561 FUBP1Q96AE4 644 aaKnown RBP8.29□□□□□ -1.08
HDAC6-221ENST00000477561 HAUS1Q96CS2 278 aa8.29□□□□□ -1.08
HDAC6-221ENST00000477561 HDAC11Q96DB2 347 aa8.29□□□□□ -1.08
HDAC6-221ENST00000477561 APOLD1Q96LR9 279 aa8.29□□□□□ -1.08
HDAC6-221ENST00000477561 SLC13A1Q9BZW2 595 aa8.29□□□□□ -1.08
HDAC6-221ENST00000477561 RNF14Q9UBS8 474 aa8.29□□□□□ -1.08
HDAC6-221ENST00000477561 APOBEC3BQ9UH17 382 aaKnown RBP8.29□□□□□ -1.08
HDAC6-221ENST00000477561 MOSPD1Q9UJG1 213 aa8.29□□□□□ -1.08
HDAC6-221ENST00000477561 ANKRD36A6QL64 1941 aa8.29□□□□□ -1.08
HDAC6-221ENST00000477561 ACACBO00763 2458 aa8.28□□□□□ -1.08
HDAC6-221ENST00000477561 TDRD6O60522 2096 aaKnown RBP8.28□□□□□ -1.08
HDAC6-221ENST00000477561 A0A1W2PQ67 120 aa8.28□□□□□ -1.08
HDAC6-221ENST00000477561 GOLGA6CA6NDK9 693 aa8.28□□□□□ -1.08
HDAC6-221ENST00000477561 GOLGA6BA6NDN3 693 aa8.28□□□□□ -1.08
HDAC6-221ENST00000477561 TMEM202A6NGA9 273 aa8.28□□□□□ -1.08
HDAC6-221ENST00000477561 ZNF487B1APH4 448 aa8.28□□□□□ -1.08
HDAC6-221ENST00000477561 PSTPIP1O43586 416 aa8.28□□□□□ -1.08
HDAC6-221ENST00000477561 FZD6O60353 706 aa8.28□□□□□ -1.08
HDAC6-221ENST00000477561 CST8O60676 142 aa8.28□□□□□ -1.08
HDAC6-221ENST00000477561 MMP2P08253 660 aa8.28□□□□□ -1.08
HDAC6-221ENST00000477561 GOLGA6DP0CG33 693 aa8.28□□□□□ -1.08
HDAC6-221ENST00000477561 CTSEP14091 401 aa8.28□□□□□ -1.08
HDAC6-221ENST00000477561 JUPP14923 745 aa8.28□□□□□ -1.08
HDAC6-221ENST00000477561 PECAM1P16284 738 aaPredicted RBP8.28□□□□□ -1.08
HDAC6-221ENST00000477561 TSHRP16473 764 aa8.28□□□□□ -1.08
HDAC6-221ENST00000477561 ZFXP17010 805 aaPredicted RBP8.28□□□□□ -1.08
HDAC6-221ENST00000477561 HTR1BP28222 390 aa8.28□□□□□ -1.08
HDAC6-221ENST00000477561 CD86P42081 329 aa8.28□□□□□ -1.08
HDAC6-221ENST00000477561 PAFAH1B1P43034 410 aa8.28□□□□□ -1.08
HDAC6-221ENST00000477561 PEX5P50542 639 aa8.28□□□□□ -1.08
HDAC6-221ENST00000477561 EPHB1P54762 984 aa8.28□□□□□ -1.08
HDAC6-221ENST00000477561 SRP54P61011 504 aaKnown RBP8.28□□□□□ -1.08
HDAC6-221ENST00000477561 PPIDQ08752 370 aaKnown RBP8.28□□□□□ -1.08
HDAC6-221ENST00000477561 MTM1Q13496 603 aa8.28□□□□□ -1.08
HDAC6-221ENST00000477561 ARHGEF7Q14155 803 aa8.28□□□□□ -1.08
HDAC6-221ENST00000477561 NFATC4Q14934 902 aa8.28□□□□□ -1.08
HDAC6-221ENST00000477561 AGERQ15109 404 aa8.28□□□□□ -1.08
HDAC6-221ENST00000477561 PDK1Q15118 436 aa8.28□□□□□ -1.08
HDAC6-221ENST00000477561 SMAD1Q15797 465 aaKnown RBP8.28□□□□□ -1.08
HDAC6-221ENST00000477561 CCDC181Q5TID7 509 aa8.28□□□□□ -1.08
HDAC6-221ENST00000477561 ALG1LQ6GMV1 187 aa8.28□□□□□ -1.08
HDAC6-221ENST00000477561 PNCKQ6P2M8 343 aa8.28□□□□□ -1.08
HDAC6-221ENST00000477561 CRTC1Q6UUV9 634 aa8.28□□□□□ -1.08
HDAC6-221ENST00000477561 Q6ZVL8 140 aa8.28□□□□□ -1.08
HDAC6-221ENST00000477561 USP45Q70EL2 814 aa8.28□□□□□ -1.08
HDAC6-221ENST00000477561 KDELC2Q7Z4H8 507 aa8.28□□□□□ -1.08
HDAC6-221ENST00000477561 NT5DC3Q86UY8 548 aa8.28□□□□□ -1.08
HDAC6-221ENST00000477561 LPCAT1Q8NF37 534 aa8.28□□□□□ -1.08
HDAC6-221ENST00000477561 MYRIPQ8NFW9 859 aa8.28□□□□□ -1.08
HDAC6-221ENST00000477561 BTN2A2Q8WVV5 523 aa8.28□□□□□ -1.08
HDAC6-221ENST00000477561 KRT35Q92764 455 aa8.28□□□□□ -1.08
HDAC6-221ENST00000477561 FATE1Q969F0 183 aa8.28□□□□□ -1.08
HDAC6-221ENST00000477561 NUS1Q96E22 293 aa8.28□□□□□ -1.08
HDAC6-221ENST00000477561 SCRN2Q96FV2 425 aa8.28□□□□□ -1.08
HDAC6-221ENST00000477561 PBKQ96KB5 322 aa8.28□□□□□ -1.08
HDAC6-221ENST00000477561 COQ10AQ96MF6 247 aa8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms