RNA–Protein interactions for RNA: ENST00000467558.5

BRAT1-203, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 5

Gene BRAT1, Length 4,440 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-203ENST00000467558 TMED1Q13445 227 aa13.8□□□□□ -0.2
BRAT1-203ENST00000467558 ADGRF1Q5T601 910 aa13.8□□□□□ -0.2
BRAT1-203ENST00000467558 FBXL22Q6P050 247 aa13.8□□□□□ -0.2
BRAT1-203ENST00000467558 CNSTQ6PJW8 725 aa13.8□□□□□ -0.2
BRAT1-203ENST00000467558 DNAJB7Q7Z6W7 309 aaPredicted RBP13.8□□□□□ -0.2
BRAT1-203ENST00000467558 GLIS1Q8NBF1 620 aa13.8□□□□□ -0.2
BRAT1-203ENST00000467558 GDPD5Q8WTR4 605 aa13.8□□□□□ -0.2
BRAT1-203ENST00000467558 UGT2B28Q9BY64 529 aa13.8□□□□□ -0.2
BRAT1-203ENST00000467558 ZCCHC18P0CG32 403 aa13.8□□□□□ -0.2
BRAT1-203ENST00000467558 PSME3P61289 254 aa13.8□□□□□ -0.2
BRAT1-203ENST00000467558 CACNG1Q06432 222 aa13.8□□□□□ -0.2
BRAT1-203ENST00000467558 LRRC23Q53EV4 343 aaPredicted RBP13.8□□□□□ -0.2
BRAT1-203ENST00000467558 CNKSR3Q6P9H4 555 aa13.8□□□□□ -0.2
BRAT1-203ENST00000467558 CYP4X1Q8N118 509 aa13.8□□□□□ -0.2
BRAT1-203ENST00000467558 DIS3LQ8TF46 1054 aaKnown RBP13.8□□□□□ -0.2
BRAT1-203ENST00000467558 ZNF599Q96NL3 588 aa13.8□□□□□ -0.2
BRAT1-203ENST00000467558 QRFPRQ96P65 431 aa13.8□□□□□ -0.2
BRAT1-203ENST00000467558 SLC28A3Q9HAS3 691 aa13.8□□□□□ -0.2
BRAT1-203ENST00000467558 ATXN2Q99700 1313 aaKnown RBP13.8□□□□□ -0.2
BRAT1-203ENST00000467558 TCRBV7S3A2A0A539 114 aa13.8□□□□□ -0.2
BRAT1-203ENST00000467558 NFATC1O95644 943 aa13.8□□□□□ -0.2
BRAT1-203ENST00000467558 HOXA11P31270 313 aaPredicted RBP13.8□□□□□ -0.2
BRAT1-203ENST00000467558 HPCAL1P37235 193 aa13.8□□□□□ -0.2
BRAT1-203ENST00000467558 SPAM1P38567 509 aa13.8□□□□□ -0.2
BRAT1-203ENST00000467558 KCNJ11Q14654 390 aa13.8□□□□□ -0.2
BRAT1-203ENST00000467558 AGMOQ6ZNB7 445 aa13.8□□□□□ -0.2
BRAT1-203ENST00000467558 ACTRT2Q8TDY3 377 aa13.8□□□□□ -0.2
BRAT1-203ENST00000467558 DNAJC1Q96KC8 554 aaKnown RBP13.8□□□□□ -0.2
BRAT1-203ENST00000467558 NMUR2Q9GZQ4 415 aa13.8□□□□□ -0.2
BRAT1-203ENST00000467558 LIMD1Q9UGP4 676 aa13.8□□□□□ -0.2
BRAT1-203ENST00000467558 C15orf41Q9Y2V0 281 aa13.8□□□□□ -0.2
BRAT1-203ENST00000467558 KCNE2Q9Y6J6 123 aa13.8□□□□□ -0.2
BRAT1-203ENST00000467558 DDX60Q8IY21 1712 aaKnown RBP13.79□□□□□ -0.2
BRAT1-203ENST00000467558 LAMA4Q16363 1823 aa13.79□□□□□ -0.2
BRAT1-203ENST00000467558 ANKDD1BA6NHY2 528 aa13.79□□□□□ -0.2
BRAT1-203ENST00000467558 PRR5-ARHGAP8B1AHC4 643 aa13.79□□□□□ -0.2
BRAT1-203ENST00000467558 FFAR3O14843 346 aa13.79□□□□□ -0.2
BRAT1-203ENST00000467558 GPR42O15529 346 aa13.79□□□□□ -0.2
BRAT1-203ENST00000467558 CXCR2P25025 360 aa13.79□□□□□ -0.2
BRAT1-203ENST00000467558 RRM2P31350 389 aa13.79□□□□□ -0.2
BRAT1-203ENST00000467558 ARHGAP8P85298 464 aa13.79□□□□□ -0.2
BRAT1-203ENST00000467558 C17orf99Q6UX52 265 aa13.79□□□□□ -0.2
BRAT1-203ENST00000467558 ZNF621Q6ZSS3 439 aa13.79□□□□□ -0.2
BRAT1-203ENST00000467558 WDTC1Q8N5D0 677 aa13.79□□□□□ -0.2
BRAT1-203ENST00000467558 ABTB1Q969K4 478 aaPredicted RBP13.79□□□□□ -0.2
BRAT1-203ENST00000467558 TCF25Q9BQ70 676 aa13.79□□□□□ -0.2
BRAT1-203ENST00000467558 HAPLN2Q9GZV7 340 aa13.79□□□□□ -0.2
BRAT1-203ENST00000467558 SCHIP1Q9P0W5 487 aaPredicted RBP13.79□□□□□ -0.2
BRAT1-203ENST00000467558 BTRCQ9Y297 605 aa13.79□□□□□ -0.2
BRAT1-203ENST00000467558 YIPF1Q9Y548 306 aa13.79□□□□□ -0.2
BRAT1-203ENST00000467558 ZMPSTE24O75844 475 aa13.79□□□□□ -0.2
BRAT1-203ENST00000467558 CLTBP09497 229 aa13.79□□□□□ -0.2
BRAT1-203ENST00000467558 RPS24P62847 133 aaKnown RBP13.79□□□□□ -0.2
BRAT1-203ENST00000467558 MRPS22P82650 360 aaKnown RBP13.79□□□□□ -0.2
BRAT1-203ENST00000467558 ZNF33AQ06730 810 aa13.79□□□□□ -0.2
BRAT1-203ENST00000467558 ACAP2Q15057 778 aa13.79□□□□□ -0.2
BRAT1-203ENST00000467558 LDB1Q86U70 411 aaPredicted RBP13.79□□□□□ -0.2
BRAT1-203ENST00000467558 PACS2Q86VP3 889 aa13.79□□□□□ -0.2
BRAT1-203ENST00000467558 ASZ1Q8WWH4 475 aa13.79□□□□□ -0.2
BRAT1-203ENST00000467558 FEM1CQ96JP0 617 aa13.79□□□□□ -0.2
BRAT1-203ENST00000467558 RNF145Q96MT1 663 aa13.79□□□□□ -0.2
BRAT1-203ENST00000467558 CCDC3Q9BQI4 270 aa13.79□□□□□ -0.2
BRAT1-203ENST00000467558 SPAG4Q9NPE6 437 aa13.79□□□□□ -0.2
BRAT1-203ENST00000467558 KCTD5Q9NXV2 234 aa13.79□□□□□ -0.2
BRAT1-203ENST00000467558 H2AFY2Q9P0M6 372 aaPredicted RBP13.79□□□□□ -0.2
BRAT1-203ENST00000467558 TMEM216Q9P0N5 145 aa13.79□□□□□ -0.2
BRAT1-203ENST00000467558 RBM47A0AV96 593 aaKnown RBP13.79□□□□□ -0.2
BRAT1-203ENST00000467558 SAC3D1A6NKF1 404 aa13.79□□□□□ -0.2
BRAT1-203ENST00000467558 SLC28A1O00337 649 aa13.79□□□□□ -0.2
BRAT1-203ENST00000467558 POP4O95707 220 aaKnown RBP13.79□□□□□ -0.2
BRAT1-203ENST00000467558 IDO1P14902 403 aa13.79□□□□□ -0.2
BRAT1-203ENST00000467558 MAGEA11P43364 429 aa13.79□□□□□ -0.2
BRAT1-203ENST00000467558 FBXW4P57775 412 aa13.79□□□□□ -0.2
BRAT1-203ENST00000467558 MAPKAPK3Q16644 382 aa13.79□□□□□ -0.2
BRAT1-203ENST00000467558 UPP1Q16831 310 aa13.79□□□□□ -0.2
BRAT1-203ENST00000467558 ZYG11AQ6WRX3 759 aa13.79□□□□□ -0.2
BRAT1-203ENST00000467558 ACDQ96AP0 544 aa13.79□□□□□ -0.2
BRAT1-203ENST00000467558 MTFMTQ96DP5 389 aaKnown RBP13.79□□□□□ -0.2
BRAT1-203ENST00000467558 PEBP4Q96S96 227 aa13.79□□□□□ -0.2
BRAT1-203ENST00000467558 GPR21Q99679 349 aa13.79□□□□□ -0.2
BRAT1-203ENST00000467558 INVSQ9Y283 1065 aa13.79□□□□□ -0.2
BRAT1-203ENST00000467558 SGTAO43765 313 aa13.78□□□□□ -0.2
BRAT1-203ENST00000467558 STBD1O95210 358 aa13.78□□□□□ -0.2
BRAT1-203ENST00000467558 ABCB1P08183 1280 aaPredicted RBP13.78□□□□□ -0.2
BRAT1-203ENST00000467558 MPSTP25325 297 aa13.78□□□□□ -0.2
BRAT1-203ENST00000467558 PIK3R1P27986 724 aa13.78□□□□□ -0.2
BRAT1-203ENST00000467558 SLC11A1P49279 550 aa13.78□□□□□ -0.2
BRAT1-203ENST00000467558 KLF1Q13351 362 aaPredicted RBP13.78□□□□□ -0.2
BRAT1-203ENST00000467558 CPSF6Q16630 551 aaKnown RBP eCLIP13.78□□□□□ -0.2
BRAT1-203ENST00000467558 ARL13AQ5H913 290 aaPredicted RBP13.78□□□□□ -0.2
BRAT1-203ENST00000467558 CYP4Z1Q86W10 505 aa13.78□□□□□ -0.2
BRAT1-203ENST00000467558 SMG8Q8ND04 991 aaKnown RBP13.78□□□□□ -0.2
BRAT1-203ENST00000467558 TRPC4Q9UBN4 977 aa13.78□□□□□ -0.2
BRAT1-203ENST00000467558 TLL2Q9Y6L7 1015 aa13.78□□□□□ -0.2
BRAT1-203ENST00000467558 KCNH1O95259 989 aa13.78□□□□□ -0.2
BRAT1-203ENST00000467558 COX7A2P14406 83 aa13.78□□□□□ -0.2
BRAT1-203ENST00000467558 IGFBP4P22692 258 aa13.78□□□□□ -0.2
BRAT1-203ENST00000467558 GRIA1P42261 906 aa13.78□□□□□ -0.2
BRAT1-203ENST00000467558 TAS2R39P59534 338 aa13.78□□□□□ -0.2
BRAT1-203ENST00000467558 SOX4Q06945 474 aaPredicted RBP13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms