RNA–Protein interactions for RNA: ENST00000452448.6

EPHA3-202, Transcript of EPH receptor A3, humanhuman

TSL 1 (best) BASIC

Gene EPHA3, Length 2,546 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA3-202ENST00000452448 OTCP00480 354 aa4.98□□□□□ -1.61
EPHA3-202ENST00000452448 IGFBP1P08833 259 aaPredicted RBP4.98□□□□□ -1.61
EPHA3-202ENST00000452448 ZCCHC18P0CG32 403 aa4.98□□□□□ -1.61
EPHA3-202ENST00000452448 NCF1P14598 390 aaPredicted RBP4.98□□□□□ -1.61
EPHA3-202ENST00000452448 IL1R1P14778 569 aa4.98□□□□□ -1.61
EPHA3-202ENST00000452448 NR4A1P22736 598 aa4.98□□□□□ -1.61
EPHA3-202ENST00000452448 PCSK1P29120 753 aa4.98□□□□□ -1.61
EPHA3-202ENST00000452448 CASP1P29466 404 aa4.98□□□□□ -1.61
EPHA3-202ENST00000452448 EIF2S3P41091 472 aaKnown RBP4.98□□□□□ -1.61
EPHA3-202ENST00000452448 ADCYAP1R1P41586 468 aa4.98□□□□□ -1.61
EPHA3-202ENST00000452448 DNM2P50570 870 aa4.98□□□□□ -1.61
EPHA3-202ENST00000452448 CLCNKAP51800 687 aa4.98□□□□□ -1.61
EPHA3-202ENST00000452448 PDE1AP54750 535 aa4.98□□□□□ -1.61
EPHA3-202ENST00000452448 STARD6P59095 220 aa4.98□□□□□ -1.61
EPHA3-202ENST00000452448 RPL10AP62906 217 aaKnown RBP4.98□□□□□ -1.61
EPHA3-202ENST00000452448 ERVK-9P63128 1117 aa4.98□□□□□ -1.61
EPHA3-202ENST00000452448 RBP5P82980 135 aa4.98□□□□□ -1.61
EPHA3-202ENST00000452448 ARF5P84085 180 aa4.98□□□□□ -1.61
EPHA3-202ENST00000452448 RELBQ01201 579 aa4.98□□□□□ -1.61
EPHA3-202ENST00000452448 BTKQ06187 659 aa4.98□□□□□ -1.61
EPHA3-202ENST00000452448 RESTQ13127 1097 aa4.98□□□□□ -1.61
EPHA3-202ENST00000452448 KLF1Q13351 362 aaPredicted RBP4.98□□□□□ -1.61
EPHA3-202ENST00000452448 AUHQ13825 339 aaKnown RBP4.98□□□□□ -1.61
EPHA3-202ENST00000452448 ADIPOQQ15848 244 aa4.98□□□□□ -1.61
EPHA3-202ENST00000452448 ZYXQ15942 572 aaKnown RBP4.98□□□□□ -1.61
EPHA3-202ENST00000452448 YIF1BQ5BJH7 314 aa4.98□□□□□ -1.61
EPHA3-202ENST00000452448 XKR4Q5GH76 650 aa4.98□□□□□ -1.61
EPHA3-202ENST00000452448 RESP18Q5W5W9 173 aa4.98□□□□□ -1.61
EPHA3-202ENST00000452448 GALNT18Q6P9A2 607 aa4.98□□□□□ -1.61
EPHA3-202ENST00000452448 TPGS1Q6ZTW0 290 aa4.98□□□□□ -1.61
EPHA3-202ENST00000452448 TRMT11Q7Z4G4 463 aaKnown RBP4.98□□□□□ -1.61
EPHA3-202ENST00000452448 NET1Q7Z628 596 aaPredicted RBP4.98□□□□□ -1.61
EPHA3-202ENST00000452448 THAP5Q7Z6K1 395 aa4.98□□□□□ -1.61
EPHA3-202ENST00000452448 HERC6Q8IVU3 1022 aa4.98□□□□□ -1.61
EPHA3-202ENST00000452448 MCOLN2Q8IZK6 566 aa4.98□□□□□ -1.61
EPHA3-202ENST00000452448 GLIS3Q8NEA6 775 aa4.98□□□□□ -1.61
EPHA3-202ENST00000452448 WDR48Q8TAF3 677 aa4.98□□□□□ -1.61
EPHA3-202ENST00000452448 KBTBD7Q8WVZ9 684 aa4.98□□□□□ -1.61
EPHA3-202ENST00000452448 ZNF707Q96C28 371 aaPredicted RBP4.98□□□□□ -1.61
EPHA3-202ENST00000452448 HMCESQ96FZ2 354 aa4.98□□□□□ -1.61
EPHA3-202ENST00000452448 CCDC120Q96HB5 630 aa4.98□□□□□ -1.61
EPHA3-202ENST00000452448 TMEM80Q96HE8 168 aa4.98□□□□□ -1.61
EPHA3-202ENST00000452448 KCNJ15Q99712 375 aa4.98□□□□□ -1.61
EPHA3-202ENST00000452448 SLC22A4Q9H015 551 aa4.98□□□□□ -1.61
EPHA3-202ENST00000452448 KLC2Q9H0B6 622 aa4.98□□□□□ -1.61
EPHA3-202ENST00000452448 SLC52A2Q9HAB3 445 aa4.98□□□□□ -1.61
EPHA3-202ENST00000452448 KRT84Q9NSB2 600 aa4.98□□□□□ -1.61
EPHA3-202ENST00000452448 C14orf119Q9NWQ9 140 aa4.98□□□□□ -1.61
EPHA3-202ENST00000452448 VPS54Q9P1Q0 977 aa4.98□□□□□ -1.61
EPHA3-202ENST00000452448 SPASTQ9UBP0 616 aa4.98□□□□□ -1.61
EPHA3-202ENST00000452448 ZNF229Q9UJW7 825 aa4.98□□□□□ -1.61
EPHA3-202ENST00000452448 RPH3ALQ9UNE2 315 aa4.98□□□□□ -1.61
EPHA3-202ENST00000452448 CORO2BQ9UQ03 480 aa4.98□□□□□ -1.61
EPHA3-202ENST00000452448 GPR45Q9Y5Y3 372 aa4.98□□□□□ -1.61
EPHA3-202ENST00000452448 RTL9Q8NET4 1388 aa4.98□□□□□ -1.61
EPHA3-202ENST00000452448 WDR33Q9C0J8 1336 aaKnown RBP4.98□□□□□ -1.61
EPHA3-202ENST00000452448 A0A1B0GV90 55 aa4.98□□□□□ -1.61
EPHA3-202ENST00000452448 FAM86C2PA6NEL3 165 aa4.98□□□□□ -1.61
EPHA3-202ENST00000452448 CCT8L1PA6NM43 557 aa4.98□□□□□ -1.61
EPHA3-202ENST00000452448 CASC3O15234 703 aaKnown RBP4.98□□□□□ -1.61
EPHA3-202ENST00000452448 OGTO15294 1046 aa4.98□□□□□ -1.61
EPHA3-202ENST00000452448 PPM1DO15297 605 aa4.98□□□□□ -1.61
EPHA3-202ENST00000452448 HTRA2O43464 458 aaPredicted RBP4.98□□□□□ -1.61
EPHA3-202ENST00000452448 MTX2O75431 263 aa4.98□□□□□ -1.61
EPHA3-202ENST00000452448 CDK14O94921 469 aa4.98□□□□□ -1.61
EPHA3-202ENST00000452448 NSA2O95478 260 aaKnown RBP4.98□□□□□ -1.61
EPHA3-202ENST00000452448 DIRAS3O95661 229 aa4.98□□□□□ -1.61
EPHA3-202ENST00000452448 ESRRBO95718 433 aa4.98□□□□□ -1.61
EPHA3-202ENST00000452448 SOD2P04179 222 aa4.98□□□□□ -1.61
EPHA3-202ENST00000452448 CD3GP09693 182 aa4.98□□□□□ -1.61
EPHA3-202ENST00000452448 CYP19A1P11511 503 aaPredicted RBP4.98□□□□□ -1.61
EPHA3-202ENST00000452448 NR2C1P13056 603 aa4.98□□□□□ -1.61
EPHA3-202ENST00000452448 PKMP14618 531 aaKnown RBP4.98□□□□□ -1.61
EPHA3-202ENST00000452448 CYP2B6P20813 491 aa4.98□□□□□ -1.61
EPHA3-202ENST00000452448 DDX6P26196 483 aaKnown RBP eCLIP4.98□□□□□ -1.61
EPHA3-202ENST00000452448 RPA1P27694 616 aa4.98□□□□□ -1.61
EPHA3-202ENST00000452448 PEX2P28328 305 aa4.98□□□□□ -1.61
EPHA3-202ENST00000452448 EEF1DP29692 281 aaKnown RBP4.98□□□□□ -1.61
EPHA3-202ENST00000452448 RPL35P42766 123 aaKnown RBP4.98□□□□□ -1.61
EPHA3-202ENST00000452448 MAGEA4P43358 317 aa4.98□□□□□ -1.61
EPHA3-202ENST00000452448 AKR1D1P51857 326 aa4.98□□□□□ -1.61
EPHA3-202ENST00000452448 SCAND1P57086 179 aa4.98□□□□□ -1.61
EPHA3-202ENST00000452448 FAM189BP81408 668 aa4.98□□□□□ -1.61
EPHA3-202ENST00000452448 GALK2Q01415 458 aa4.98□□□□□ -1.61
EPHA3-202ENST00000452448 NFYCQ13952 458 aa4.98□□□□□ -1.61
EPHA3-202ENST00000452448 TOB2Q14106 344 aaPredicted RBP4.98□□□□□ -1.61
EPHA3-202ENST00000452448 PTPRRQ15256 657 aa4.98□□□□□ -1.61
EPHA3-202ENST00000452448 FAM69AQ5T7M9 428 aa4.98□□□□□ -1.61
EPHA3-202ENST00000452448 GARNL3Q5VVW2 1013 aa4.98□□□□□ -1.61
EPHA3-202ENST00000452448 CES4AQ5XG92 561 aa4.98□□□□□ -1.61
EPHA3-202ENST00000452448 ARMCX5Q6P1M9 558 aa4.98□□□□□ -1.61
EPHA3-202ENST00000452448 C1orf94Q6P1W5 598 aa4.98□□□□□ -1.61
EPHA3-202ENST00000452448 VHLLQ6RSH7 139 aa4.98□□□□□ -1.61
EPHA3-202ENST00000452448 ZNF813Q6ZN06 617 aa4.98□□□□□ -1.61
EPHA3-202ENST00000452448 MON2Q7Z3U7 1717 aa4.98□□□□□ -1.61
EPHA3-202ENST00000452448 RFX6Q8HWS3 928 aa4.98□□□□□ -1.61
EPHA3-202ENST00000452448 GRAMD1CQ8IYS0 662 aa4.98□□□□□ -1.61
EPHA3-202ENST00000452448 ZNF786Q8N393 782 aa4.98□□□□□ -1.61
EPHA3-202ENST00000452448 SH2D3CQ8N5H7 860 aa4.98□□□□□ -1.61
EPHA3-202ENST00000452448 SIMC1Q8NDZ2 872 aa4.98□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms