RNA–Protein interactions for RNA: ENST00000378060.8

VPS36-201, Transcript of vacuolar protein sorting 36 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS36, Length 4,417 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-201ENST00000378060 GALNT15Q8N3T1 639 aa8.41□□□□□ -1.06
VPS36-201ENST00000378060 SLC35B2Q8TB61 432 aa8.41□□□□□ -1.06
VPS36-201ENST00000378060 NAT14Q8WUY8 206 aa8.41□□□□□ -1.06
VPS36-201ENST00000378060 HDAC10Q969S8 669 aa8.41□□□□□ -1.06
VPS36-201ENST00000378060 CLPTM1LQ96KA5 538 aa8.41□□□□□ -1.06
VPS36-201ENST00000378060 Q96MT0 163 aa8.41□□□□□ -1.06
VPS36-201ENST00000378060 NPAS2Q99743 824 aa8.41□□□□□ -1.06
VPS36-201ENST00000378060 EBF2Q9HAK2 575 aa8.41□□□□□ -1.06
VPS36-201ENST00000378060 FANCEQ9HB96 536 aa8.41□□□□□ -1.06
VPS36-201ENST00000378060 GNPTGQ9UJJ9 305 aa8.41□□□□□ -1.06
VPS36-201ENST00000378060 NUDT5Q9UKK9 219 aa8.41□□□□□ -1.06
VPS36-201ENST00000378060 ZSWIM8A7E2V4 1837 aa8.41□□□□□ -1.06
VPS36-201ENST00000378060 A0A0J9YYE9 177 aa8.4□□□□□ -1.06
VPS36-201ENST00000378060 PDHXO00330 501 aa8.4□□□□□ -1.06
VPS36-201ENST00000378060 B4GALT5O43286 388 aa8.4□□□□□ -1.06
VPS36-201ENST00000378060 TSPAN3O60637 253 aa8.4□□□□□ -1.06
VPS36-201ENST00000378060 GPIP06744 558 aa8.4□□□□□ -1.06
VPS36-201ENST00000378060 ABCB1P08183 1280 aaPredicted RBP8.4□□□□□ -1.06
VPS36-201ENST00000378060 PAICSP22234 425 aaKnown RBP8.4□□□□□ -1.06
VPS36-201ENST00000378060 SERPINA4P29622 427 aa8.4□□□□□ -1.06
VPS36-201ENST00000378060 ADCYAP1R1P41586 468 aa8.4□□□□□ -1.06
VPS36-201ENST00000378060 IDH2P48735 452 aaKnown RBP8.4□□□□□ -1.06
VPS36-201ENST00000378060 TRAP1Q12931 704 aaKnown RBP8.4□□□□□ -1.06
VPS36-201ENST00000378060 LPIN1Q14693 890 aa8.4□□□□□ -1.06
VPS36-201ENST00000378060 SLC39A12Q504Y0 691 aa8.4□□□□□ -1.06
VPS36-201ENST00000378060 FAM171A1Q5VUB5 890 aa8.4□□□□□ -1.06
VPS36-201ENST00000378060 LYPLAL1Q5VWZ2 237 aa8.4□□□□□ -1.06
VPS36-201ENST00000378060 ZYG11AQ6WRX3 759 aa8.4□□□□□ -1.06
VPS36-201ENST00000378060 GPR180Q86V85 440 aa8.4□□□□□ -1.06
VPS36-201ENST00000378060 CDYL2Q8N8U2 506 aa8.4□□□□□ -1.06
VPS36-201ENST00000378060 OR52K2Q8NGK3 314 aa8.4□□□□□ -1.06
VPS36-201ENST00000378060 WDR36Q8NI36 951 aaKnown RBP8.4□□□□□ -1.06
VPS36-201ENST00000378060 BSNDQ8WZ55 320 aa8.4□□□□□ -1.06
VPS36-201ENST00000378060 UBE2E3Q969T4 207 aa8.4□□□□□ -1.06
VPS36-201ENST00000378060 EIF2B3Q9NR50 452 aaKnown RBP8.4□□□□□ -1.06
VPS36-201ENST00000378060 PCDHA2Q9Y5H9 948 aa8.4□□□□□ -1.06
VPS36-201ENST00000378060 COL1A2P08123 1366 aa8.4□□□□□ -1.06
VPS36-201ENST00000378060 TK2O00142 265 aa8.4□□□□□ -1.06
VPS36-201ENST00000378060 IFRD1O00458 451 aaPredicted RBP8.4□□□□□ -1.06
VPS36-201ENST00000378060 DNAJA2O60884 412 aa8.4□□□□□ -1.06
VPS36-201ENST00000378060 FAM155BO75949 473 aa8.4□□□□□ -1.06
VPS36-201ENST00000378060 CLTBP09497 229 aa8.4□□□□□ -1.06
VPS36-201ENST00000378060 TCF3P15923 654 aa8.4□□□□□ -1.06
VPS36-201ENST00000378060 SMIM11AP58511 58 aa8.4□□□□□ -1.06
VPS36-201ENST00000378060 FGD3Q5JSP0 725 aa8.4□□□□□ -1.06
VPS36-201ENST00000378060 CERCAMQ5T4B2 595 aa8.4□□□□□ -1.06
VPS36-201ENST00000378060 ARMC3Q5W041 872 aa8.4□□□□□ -1.06
VPS36-201ENST00000378060 ZNF544Q6NX49 715 aa8.4□□□□□ -1.06
VPS36-201ENST00000378060 GCNT7Q6ZNI0 430 aa8.4□□□□□ -1.06
VPS36-201ENST00000378060 HDDC2Q7Z4H3 204 aa8.4□□□□□ -1.06
VPS36-201ENST00000378060 LPGAT1Q92604 370 aa8.4□□□□□ -1.06
VPS36-201ENST00000378060 GATA5Q9BWX5 397 aaPredicted RBP8.4□□□□□ -1.06
VPS36-201ENST00000378060 UXTQ9UBK9 157 aaPredicted RBP8.4□□□□□ -1.06
VPS36-201ENST00000378060 FARP2O94887 1054 aaPredicted RBP8.4□□□□□ -1.06
VPS36-201ENST00000378060 TSPAN19P0C672 248 aa8.4□□□□□ -1.06
VPS36-201ENST00000378060 CYP2A6P11509 494 aaPredicted RBP8.4□□□□□ -1.06
VPS36-201ENST00000378060 PTPN3P26045 913 aa8.4□□□□□ -1.06
VPS36-201ENST00000378060 POU5F1Q01860 360 aaKnown RBP8.4□□□□□ -1.06
VPS36-201ENST00000378060 TRIM71Q2Q1W2 868 aaKnown RBP8.4□□□□□ -1.06
VPS36-201ENST00000378060 ACSBG2Q5FVE4 666 aa8.4□□□□□ -1.06
VPS36-201ENST00000378060 CYP4X1Q8N118 509 aa8.4□□□□□ -1.06
VPS36-201ENST00000378060 CPSF7Q8N684 471 aaKnown RBP8.4□□□□□ -1.06
VPS36-201ENST00000378060 ARRDC4Q8NCT1 418 aa8.4□□□□□ -1.06
VPS36-201ENST00000378060 ZNF540Q8NDQ6 660 aa8.4□□□□□ -1.06
VPS36-201ENST00000378060 OR4L1Q8NH43 312 aa8.4□□□□□ -1.06
VPS36-201ENST00000378060 SERAC1Q96JX3 654 aa8.4□□□□□ -1.06
VPS36-201ENST00000378060 MRPL9Q9BYD2 267 aaKnown RBP8.4□□□□□ -1.06
VPS36-201ENST00000378060 NOL11Q9H8H0 719 aaKnown RBP8.4□□□□□ -1.06
VPS36-201ENST00000378060 CAB39LQ9H9S4 337 aa8.4□□□□□ -1.06
VPS36-201ENST00000378060 DIABLOQ9NR28 239 aa8.4□□□□□ -1.06
VPS36-201ENST00000378060 ITM2BQ9Y287 266 aa8.4□□□□□ -1.06
VPS36-201ENST00000378060 PIPSLA2A3N6 862 aa8.4□□□□□ -1.07
VPS36-201ENST00000378060 DHX15O43143 795 aaKnown RBP8.4□□□□□ -1.07
VPS36-201ENST00000378060 SGTAO43765 313 aa8.4□□□□□ -1.07
VPS36-201ENST00000378060 BMP10O95393 424 aa8.4□□□□□ -1.07
VPS36-201ENST00000378060 CDK9P50750 372 aaKnown RBP8.4□□□□□ -1.07
VPS36-201ENST00000378060 FKBP1BP68106 108 aa8.4□□□□□ -1.07
VPS36-201ENST00000378060 SDE2Q6IQ49 451 aa8.4□□□□□ -1.07
VPS36-201ENST00000378060 ARMC6Q6NXE6 501 aa8.4□□□□□ -1.07
VPS36-201ENST00000378060 MZT2BQ6NZ67 158 aa8.4□□□□□ -1.07
VPS36-201ENST00000378060 ZNF554Q86TJ5 538 aa8.4□□□□□ -1.07
VPS36-201ENST00000378060 METTL3Q86U44 580 aaKnown RBP8.4□□□□□ -1.07
VPS36-201ENST00000378060 FAM35AQ86V20 835 aa8.4□□□□□ -1.07
VPS36-201ENST00000378060 EPHX4Q8IUS5 362 aa8.4□□□□□ -1.07
VPS36-201ENST00000378060 PDPRQ8NCN5 879 aa8.4□□□□□ -1.07
VPS36-201ENST00000378060 DEPDC7Q96QD5 511 aa8.4□□□□□ -1.07
VPS36-201ENST00000378060 SLC9A7Q96T83 725 aa8.4□□□□□ -1.07
VPS36-201ENST00000378060 CIB1Q99828 191 aa8.4□□□□□ -1.07
VPS36-201ENST00000378060 TSEN34Q9BSV6 310 aaKnown RBP8.4□□□□□ -1.07
VPS36-201ENST00000378060 HDHD2Q9H0R4 259 aa8.4□□□□□ -1.07
VPS36-201ENST00000378060 ASB8Q9H765 288 aa8.4□□□□□ -1.07
VPS36-201ENST00000378060 RAD18Q9NS91 495 aa8.4□□□□□ -1.07
VPS36-201ENST00000378060 EGFL7Q9UHF1 273 aa8.4□□□□□ -1.07
VPS36-201ENST00000378060 POMPQ9Y244 141 aa8.4□□□□□ -1.07
VPS36-201ENST00000378060 LOC100506127A0A0U1RQW1 187 aa8.39□□□□□ -1.07
VPS36-201ENST00000378060 C2CD4BA6NLJ0 364 aa8.39□□□□□ -1.07
VPS36-201ENST00000378060 QSOX1O00391 747 aa8.39□□□□□ -1.07
VPS36-201ENST00000378060 KLF11O14901 512 aa8.39□□□□□ -1.07
VPS36-201ENST00000378060 TIPRLO75663 272 aa8.39□□□□□ -1.07
VPS36-201ENST00000378060 ALDH1A2O94788 518 aa8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms