RNA–Protein interactions for RNA: ENST00000558868.5

TPM1-215, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 653 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-215ENST00000558868 SRPRAP08240 638 aaKnown RBP13.82□□□□□ -0.2
TPM1-215ENST00000558868 FOXN2P32314 431 aa13.82□□□□□ -0.2
TPM1-215ENST00000558868 VIPR2P41587 438 aa13.82□□□□□ -0.2
TPM1-215ENST00000558868 CTSOP43234 321 aaPredicted RBP13.82□□□□□ -0.2
TPM1-215ENST00000558868 SERPINB4P48594 390 aa13.82□□□□□ -0.2
TPM1-215ENST00000558868 DGKGP49619 791 aa13.82□□□□□ -0.2
TPM1-215ENST00000558868 MPP1Q00013 466 aa13.82□□□□□ -0.2
TPM1-215ENST00000558868 ACCSLQ4AC99 568 aa13.82□□□□□ -0.2
TPM1-215ENST00000558868 TCEAL5Q5H9L2 206 aa13.82□□□□□ -0.2
TPM1-215ENST00000558868 DGKKQ5KSL6 1271 aa13.82□□□□□ -0.2
TPM1-215ENST00000558868 RAPH1Q70E73 1250 aa13.82□□□□□ -0.2
TPM1-215ENST00000558868 PTAR1Q7Z6K3 402 aaPredicted RBP13.82□□□□□ -0.2
TPM1-215ENST00000558868 ADIPOR2Q86V24 386 aa13.82□□□□□ -0.2
TPM1-215ENST00000558868 CILP2Q8IUL8 1156 aa13.82□□□□□ -0.2
TPM1-215ENST00000558868 DENND6AQ8IWF6 608 aa13.82□□□□□ -0.2
TPM1-215ENST00000558868 CACNA2D3Q8IZS8 1091 aa13.82□□□□□ -0.2
TPM1-215ENST00000558868 ANKS4BQ8N8V4 417 aa13.82□□□□□ -0.2
TPM1-215ENST00000558868 OR4L1Q8NH43 312 aa13.82□□□□□ -0.2
TPM1-215ENST00000558868 SREK1Q8WXA9 508 aaKnown RBP13.82□□□□□ -0.2
TPM1-215ENST00000558868 ZNF75CPQ92670 426 aaPredicted RBP13.82□□□□□ -0.2
TPM1-215ENST00000558868 ATXN7L3BQ96GX2 97 aa13.82□□□□□ -0.2
TPM1-215ENST00000558868 CDKN2AIPNLQ96HQ2 116 aa13.82□□□□□ -0.2
TPM1-215ENST00000558868 RPL10LQ96L21 214 aaKnown RBP13.82□□□□□ -0.2
TPM1-215ENST00000558868 TBATAQ96M53 351 aa13.82□□□□□ -0.2
TPM1-215ENST00000558868 TCF12Q99081 682 aa13.82□□□□□ -0.2
TPM1-215ENST00000558868 GPR63Q9BZJ6 419 aa13.82□□□□□ -0.2
TPM1-215ENST00000558868 TNKS2Q9H2K2 1166 aa13.82□□□□□ -0.2
TPM1-215ENST00000558868 RABEP2Q9H5N1 569 aa13.82□□□□□ -0.2
TPM1-215ENST00000558868 ZFP14Q9HCL3 533 aa13.82□□□□□ -0.2
TPM1-215ENST00000558868 CATSPERZQ9NTU4 200 aa13.82□□□□□ -0.2
TPM1-215ENST00000558868 INTS10Q9NVR2 710 aaKnown RBP13.82□□□□□ -0.2
TPM1-215ENST00000558868 HECAQ9UBI9 543 aaPredicted RBP13.82□□□□□ -0.2
TPM1-215ENST00000558868 ERVW-1Q9UQF0 538 aa13.82□□□□□ -0.2
TPM1-215ENST00000558868 SLC27A6Q9Y2P4 619 aa13.82□□□□□ -0.2
TPM1-215ENST00000558868 PKP3Q9Y446 797 aa13.82□□□□□ -0.2
TPM1-215ENST00000558868 KCTD3Q9Y597 815 aa13.82□□□□□ -0.2
TPM1-215ENST00000558868 SPO11Q9Y5K1 396 aa13.82□□□□□ -0.2
TPM1-215ENST00000558868 A0A087X1B8 175 aa13.81□□□□□ -0.2
TPM1-215ENST00000558868 A0A096LPK6 155 aa13.81□□□□□ -0.2
TPM1-215ENST00000558868 CCDC162PA2VCL2 907 aa13.81□□□□□ -0.2
TPM1-215ENST00000558868 RFXAPO00287 272 aa13.81□□□□□ -0.2
TPM1-215ENST00000558868 TRAFD1O14545 582 aaPredicted RBP13.81□□□□□ -0.2
TPM1-215ENST00000558868 KLF11O14901 512 aa13.81□□□□□ -0.2
TPM1-215ENST00000558868 ZNF821O75541 412 aaPredicted RBP13.81□□□□□ -0.2
TPM1-215ENST00000558868 PIRTP0C851 137 aa13.81□□□□□ -0.2
TPM1-215ENST00000558868 STMN1P16949 149 aa13.81□□□□□ -0.2
TPM1-215ENST00000558868 NFKBIAP25963 317 aa13.81□□□□□ -0.2
TPM1-215ENST00000558868 PMLP29590 882 aa13.81□□□□□ -0.2
TPM1-215ENST00000558868 ABL2P42684 1182 aa13.81□□□□□ -0.2
TPM1-215ENST00000558868 ARSDP51689 593 aa13.81□□□□□ -0.2
TPM1-215ENST00000558868 KPNA2P52292 529 aaKnown RBP13.81□□□□□ -0.2
TPM1-215ENST00000558868 RAB10P61026 200 aa13.81□□□□□ -0.2
TPM1-215ENST00000558868 ST8SIA6P61647 398 aa13.81□□□□□ -0.2
TPM1-215ENST00000558868 TMPRSS15P98073 1019 aa13.81□□□□□ -0.2
TPM1-215ENST00000558868 DLG2Q15700 870 aa13.81□□□□□ -0.2
TPM1-215ENST00000558868 FASTKD1Q53R41 847 aaKnown RBP13.81□□□□□ -0.2
TPM1-215ENST00000558868 AARS2Q5JTZ9 985 aaKnown RBP13.81□□□□□ -0.2
TPM1-215ENST00000558868 ATG16L1Q676U5 607 aa13.81□□□□□ -0.2
TPM1-215ENST00000558868 SYCE2Q6PIF2 218 aa13.81□□□□□ -0.2
TPM1-215ENST00000558868 CAMK1DQ8IU85 385 aa13.81□□□□□ -0.2
TPM1-215ENST00000558868 YAF2Q8IY57 180 aa13.81□□□□□ -0.2
TPM1-215ENST00000558868 TTC30BQ8N4P2 665 aa13.81□□□□□ -0.2
TPM1-215ENST00000558868 NAT16Q8N8M0 369 aa13.81□□□□□ -0.2
TPM1-215ENST00000558868 CCDC63Q8NA47 563 aa13.81□□□□□ -0.2
TPM1-215ENST00000558868 ARMC2Q8NEN0 867 aa13.81□□□□□ -0.2
TPM1-215ENST00000558868 MDGA1Q8NFP4 955 aa13.81□□□□□ -0.2
TPM1-215ENST00000558868 OR4K2Q8NGD2 314 aa13.81□□□□□ -0.2
TPM1-215ENST00000558868 OR13C4Q8NGS5 318 aa13.81□□□□□ -0.2
TPM1-215ENST00000558868 PIH1D2Q8WWB5 315 aa13.81□□□□□ -0.2
TPM1-215ENST00000558868 RSPRY1Q96DX4 576 aa13.81□□□□□ -0.2
TPM1-215ENST00000558868 ELMO2Q96JJ3 720 aa13.81□□□□□ -0.2
TPM1-215ENST00000558868 RIPOR3Q96MK2 946 aa13.81□□□□□ -0.2
TPM1-215ENST00000558868 LRRC3BQ96PB8 259 aa13.81□□□□□ -0.2
TPM1-215ENST00000558868 PLCD4Q9BRC7 762 aa13.81□□□□□ -0.2
TPM1-215ENST00000558868 PITPNM3Q9BZ71 974 aa13.81□□□□□ -0.2
TPM1-215ENST00000558868 MANSC1Q9H8J5 431 aa13.81□□□□□ -0.2
TPM1-215ENST00000558868 PHTF1Q9UMS5 762 aa13.81□□□□□ -0.2
TPM1-215ENST00000558868 ZNF711Q9Y462 761 aa13.81□□□□□ -0.2
TPM1-215ENST00000558868 A0A0J9YYE9 177 aa13.8□□□□□ -0.2
TPM1-215ENST00000558868 WASH3PC4AMC7 463 aa13.8□□□□□ -0.2
TPM1-215ENST00000558868 H7C0S8 307 aa13.8□□□□□ -0.2
TPM1-215ENST00000558868 HAUS5O94927 633 aa13.8□□□□□ -0.2
TPM1-215ENST00000558868 TRBC1P01850 177 aa13.8□□□□□ -0.2
TPM1-215ENST00000558868 PRKCGP05129 697 aa13.8□□□□□ -0.2
TPM1-215ENST00000558868 C2P06681 752 aa13.8□□□□□ -0.2
TPM1-215ENST00000558868 CISD3P0C7P0 127 aa13.8□□□□□ -0.2
TPM1-215ENST00000558868 GABRB3P28472 473 aa13.8□□□□□ -0.2
TPM1-215ENST00000558868 SLC8A1P32418 973 aa13.8□□□□□ -0.2
TPM1-215ENST00000558868 STK19P49842 368 aaPredicted RBP13.8□□□□□ -0.2
TPM1-215ENST00000558868 POLR2LP62875 67 aaKnown RBP13.8□□□□□ -0.2
TPM1-215ENST00000558868 ADAM15Q13444 863 aa13.8□□□□□ -0.2
TPM1-215ENST00000558868 TSNAXIP1Q2TAA8 658 aa13.8□□□□□ -0.2
TPM1-215ENST00000558868 PREPLQ4J6C6 727 aaPredicted RBP13.8□□□□□ -0.2
TPM1-215ENST00000558868 RNF187Q5TA31 235 aaPredicted RBP13.8□□□□□ -0.2
TPM1-215ENST00000558868 N4BP2L1Q5TBK1 243 aaPredicted RBP13.8□□□□□ -0.2
TPM1-215ENST00000558868 GRAMD4Q6IC98 578 aa13.8□□□□□ -0.2
TPM1-215ENST00000558868 FAM45BPQ6NSW5 357 aa13.8□□□□□ -0.2
TPM1-215ENST00000558868 CDHR3Q6ZTQ4 885 aa13.8□□□□□ -0.2
TPM1-215ENST00000558868 PIGWQ7Z7B1 504 aa13.8□□□□□ -0.2
TPM1-215ENST00000558868 CMC1Q7Z7K0 106 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 853.2 ms