RNA–Protein interactions for RNA: ENST00000545894.1

DDB1-224, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 2,282 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-224ENST00000545894 ANKRD60Q9BZ19 345 aa11.53□□□□□ -0.56
DDB1-224ENST00000545894 ULBP1Q9BZM6 244 aa11.53□□□□□ -0.56
DDB1-224ENST00000545894 MEAF6Q9HAF1 191 aa11.53□□□□□ -0.56
DDB1-224ENST00000545894 EML4Q9HC35 981 aaKnown RBP11.53□□□□□ -0.56
DDB1-224ENST00000545894 DDIT4Q9NX09 232 aa11.53□□□□□ -0.56
DDB1-224ENST00000545894 RHBDL2Q9NX52 303 aa11.53□□□□□ -0.56
DDB1-224ENST00000545894 CCDC167Q9P0B6 97 aa11.53□□□□□ -0.56
DDB1-224ENST00000545894 CD300AQ9UGN4 299 aa11.53□□□□□ -0.56
DDB1-224ENST00000545894 CNOT6Q9ULM6 557 aaKnown RBP11.53□□□□□ -0.56
DDB1-224ENST00000545894 AAR2Q9Y312 384 aaKnown RBP11.53□□□□□ -0.56
DDB1-224ENST00000545894 TET1Q8NFU7 2136 aa11.52□□□□□ -0.56
DDB1-224ENST00000545894 YJEFN3A6XGL0 299 aa11.52□□□□□ -0.56
DDB1-224ENST00000545894 MRASO14807 208 aa11.52□□□□□ -0.56
DDB1-224ENST00000545894 HTRA2O43464 458 aaPredicted RBP11.52□□□□□ -0.56
DDB1-224ENST00000545894 CACNG3O60359 315 aa11.52□□□□□ -0.56
DDB1-224ENST00000545894 BAIAP3O94812 1187 aa11.52□□□□□ -0.56
DDB1-224ENST00000545894 STAMBPO95630 424 aa11.52□□□□□ -0.56
DDB1-224ENST00000545894 NELFEP18615 380 aaKnown RBP11.52□□□□□ -0.56
DDB1-224ENST00000545894 ARCN1P48444 511 aaKnown RBP11.52□□□□□ -0.56
DDB1-224ENST00000545894 GALK1P51570 392 aa11.52□□□□□ -0.56
DDB1-224ENST00000545894 ZNF135P52742 658 aaPredicted RBP11.52□□□□□ -0.56
DDB1-224ENST00000545894 SLC12A2P55011 1212 aa11.52□□□□□ -0.56
DDB1-224ENST00000545894 MAP3K7CLP57077 242 aa11.52□□□□□ -0.56
DDB1-224ENST00000545894 TAS2R39P59534 338 aa11.52□□□□□ -0.56
DDB1-224ENST00000545894 POU6F1Q14863 301 aa11.52□□□□□ -0.56
DDB1-224ENST00000545894 C6orf10Q5SRN2 563 aa11.52□□□□□ -0.56
DDB1-224ENST00000545894 IRAK1BP1Q5VVH5 260 aa11.52□□□□□ -0.56
DDB1-224ENST00000545894 FAM45BPQ6NSW5 357 aa11.52□□□□□ -0.56
DDB1-224ENST00000545894 HMBOX1Q6NT76 420 aa11.52□□□□□ -0.56
DDB1-224ENST00000545894 POTEHQ6S545 545 aa11.52□□□□□ -0.56
DDB1-224ENST00000545894 CYP2R1Q6VVX0 501 aa11.52□□□□□ -0.56
DDB1-224ENST00000545894 AGMOQ6ZNB7 445 aa11.52□□□□□ -0.56
DDB1-224ENST00000545894 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP11.52□□□□□ -0.56
DDB1-224ENST00000545894 TOP6BLQ8N6T0 577 aa11.52□□□□□ -0.56
DDB1-224ENST00000545894 PPHLN1Q8NEY8 458 aaKnown RBP11.52□□□□□ -0.56
DDB1-224ENST00000545894 FAM45AQ8TCE6 357 aa11.52□□□□□ -0.56
DDB1-224ENST00000545894 MIPOL1Q8TD10 442 aa11.52□□□□□ -0.56
DDB1-224ENST00000545894 HERVK_113Q902F9 699 aa11.52□□□□□ -0.56
DDB1-224ENST00000545894 SLC25A23Q9BV35 468 aa11.52□□□□□ -0.56
DDB1-224ENST00000545894 NOL11Q9H8H0 719 aaKnown RBP11.52□□□□□ -0.56
DDB1-224ENST00000545894 CLK4Q9HAZ1 481 aaKnown RBP11.52□□□□□ -0.56
DDB1-224ENST00000545894 KLK14Q9P0G3 267 aa11.52□□□□□ -0.56
DDB1-224ENST00000545894 CXXC1Q9P0U4 656 aaPredicted RBP11.52□□□□□ -0.56
DDB1-224ENST00000545894 SLC8A2Q9UPR5 921 aa11.52□□□□□ -0.56
DDB1-224ENST00000545894 NEMP2A6NFY4 417 aa11.52□□□□□ -0.57
DDB1-224ENST00000545894 GPC4O75487 556 aa11.52□□□□□ -0.57
DDB1-224ENST00000545894 SRP72O76094 671 aaKnown RBP11.52□□□□□ -0.57
DDB1-224ENST00000545894 BMP10O95393 424 aa11.52□□□□□ -0.57
DDB1-224ENST00000545894 NCAM1P13591 858 aa11.52□□□□□ -0.57
DDB1-224ENST00000545894 HDCP19113 662 aa11.52□□□□□ -0.57
DDB1-224ENST00000545894 ARNTP27540 789 aa11.52□□□□□ -0.57
DDB1-224ENST00000545894 SLC1A2P43004 574 aa11.52□□□□□ -0.57
DDB1-224ENST00000545894 CD151P48509 253 aa11.52□□□□□ -0.57
DDB1-224ENST00000545894 NDST2P52849 883 aa11.52□□□□□ -0.57
DDB1-224ENST00000545894 DAOAP59103 153 aa11.52□□□□□ -0.57
DDB1-224ENST00000545894 C9orf50Q5SZB4 431 aa11.52□□□□□ -0.57
DDB1-224ENST00000545894 PPP4R4Q6NUP7 873 aa11.52□□□□□ -0.57
DDB1-224ENST00000545894 ESRP1Q6NXG1 681 aaKnown RBP11.52□□□□□ -0.57
DDB1-224ENST00000545894 HACD2Q6Y1H2 254 aa11.52□□□□□ -0.57
DDB1-224ENST00000545894 ZBTB49Q6ZSB9 765 aa11.52□□□□□ -0.57
DDB1-224ENST00000545894 TMCO2Q7Z6W1 182 aaPredicted RBP11.52□□□□□ -0.57
DDB1-224ENST00000545894 FIBCD1Q8N539 461 aa11.52□□□□□ -0.57
DDB1-224ENST00000545894 ANKFN1Q8N957 763 aa11.52□□□□□ -0.57
DDB1-224ENST00000545894 SPATA22Q8NHS9 363 aa11.52□□□□□ -0.57
DDB1-224ENST00000545894 GRIN3AQ8TCU5 1115 aa11.52□□□□□ -0.57
DDB1-224ENST00000545894 USP33Q8TEY7 942 aa11.52□□□□□ -0.57
DDB1-224ENST00000545894 PPWD1Q96BP3 646 aaKnown RBP11.52□□□□□ -0.57
DDB1-224ENST00000545894 CCDC126Q96EE4 140 aa11.52□□□□□ -0.57
DDB1-224ENST00000545894 PGAP3Q96FM1 320 aaPredicted RBP11.52□□□□□ -0.57
DDB1-224ENST00000545894 CELF6Q96J87 481 aaKnown RBP11.52□□□□□ -0.57
DDB1-224ENST00000545894 TSGA13Q96PP4 275 aa11.52□□□□□ -0.57
DDB1-224ENST00000545894 GDF15Q99988 308 aa11.52□□□□□ -0.57
DDB1-224ENST00000545894 COLEC11Q9BWP8 271 aa11.52□□□□□ -0.57
DDB1-224ENST00000545894 GOLGA2P5Q9HBQ8 144 aa11.52□□□□□ -0.57
DDB1-224ENST00000545894 MRM3Q9HC36 420 aaKnown RBP11.52□□□□□ -0.57
DDB1-224ENST00000545894 TMEM181Q9P2C4 612 aa11.52□□□□□ -0.57
DDB1-224ENST00000545894 CROTQ9UKG9 612 aa11.52□□□□□ -0.57
DDB1-224ENST00000545894 PCDHB7Q9Y5E2 793 aa11.52□□□□□ -0.57
DDB1-224ENST00000545894 SNX10Q9Y5X0 201 aa11.52□□□□□ -0.57
DDB1-224ENST00000545894 TNRC18O15417 2968 aaPredicted RBP11.51□□□□□ -0.57
DDB1-224ENST00000545894 ZBBXA8MT70 800 aa11.51□□□□□ -0.57
DDB1-224ENST00000545894 NRP2O60462 931 aa11.51□□□□□ -0.57
DDB1-224ENST00000545894 EFCAB14O75071 495 aa11.51□□□□□ -0.57
DDB1-224ENST00000545894 EOMESO95936 686 aa11.51□□□□□ -0.57
DDB1-224ENST00000545894 POU4F1Q01851 419 aa11.51□□□□□ -0.57
DDB1-224ENST00000545894 SOX4Q06945 474 aaPredicted RBP11.51□□□□□ -0.57
DDB1-224ENST00000545894 TMED1Q13445 227 aa11.51□□□□□ -0.57
DDB1-224ENST00000545894 PPP1R3AQ16821 1122 aa11.51□□□□□ -0.57
DDB1-224ENST00000545894 NHSL2Q5HYW2 709 aa11.51□□□□□ -0.57
DDB1-224ENST00000545894 CUZD1Q86UP6 607 aa11.51□□□□□ -0.57
DDB1-224ENST00000545894 DHFR2Q86XF0 187 aa11.51□□□□□ -0.57
DDB1-224ENST00000545894 C2CD4AQ8NCU7 369 aaPredicted RBP11.51□□□□□ -0.57
DDB1-224ENST00000545894 IPMKQ8NFU5 416 aa11.51□□□□□ -0.57
DDB1-224ENST00000545894 PPP1R14BQ96C90 147 aa11.51□□□□□ -0.57
DDB1-224ENST00000545894 ELAC1Q9H777 363 aaKnown RBP11.51□□□□□ -0.57
DDB1-224ENST00000545894 LIN28AQ9H9Z2 209 aaKnown RBP11.51□□□□□ -0.57
DDB1-224ENST00000545894 CYP4F12Q9HCS2 524 aa11.51□□□□□ -0.57
DDB1-224ENST00000545894 IGSF5Q9NSI5 407 aa11.51□□□□□ -0.57
DDB1-224ENST00000545894 TMEM161AQ9NX61 479 aa11.51□□□□□ -0.57
DDB1-224ENST00000545894 DUS2Q9NX74 493 aaKnown RBP11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms