RNA–Protein interactions for RNA: ENST00000530546.5

USP35-207, Transcript of ubiquitin specific peptidase 35, humanhuman

TSL 1 (best)

Gene USP35, Length 2,986 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP35-207ENST00000530546 ZNF683Q8IZ20 524 aa11.61□□□□□ -0.55
USP35-207ENST00000530546 GIPC3Q8TF64 312 aa11.61□□□□□ -0.55
USP35-207ENST00000530546 BTN2A3PQ96KV6 586 aa11.61□□□□□ -0.55
USP35-207ENST00000530546 SORT1Q99523 831 aa11.61□□□□□ -0.55
USP35-207ENST00000530546 RHOJQ9H4E5 214 aa11.61□□□□□ -0.55
USP35-207ENST00000530546 RUVBL2Q9Y230 463 aaKnown RBP11.61□□□□□ -0.55
USP35-207ENST00000530546 PALM2-AKAP2B1ALY0 433 aaPredicted RBP11.61□□□□□ -0.55
USP35-207ENST00000530546 H3BSA7 217 aa11.61□□□□□ -0.55
USP35-207ENST00000530546 FBP2O00757 339 aa11.61□□□□□ -0.55
USP35-207ENST00000530546 AURKAO14965 403 aa11.61□□□□□ -0.55
USP35-207ENST00000530546 TPD52L2O43399 206 aaKnown RBP11.61□□□□□ -0.55
USP35-207ENST00000530546 CRTAMO95727 393 aa11.61□□□□□ -0.55
USP35-207ENST00000530546 HSPA4LO95757 839 aa11.61□□□□□ -0.55
USP35-207ENST00000530546 PEX11BO96011 259 aa11.61□□□□□ -0.55
USP35-207ENST00000530546 ZNF12P17014 697 aa11.61□□□□□ -0.55
USP35-207ENST00000530546 ARNTP27540 789 aa11.61□□□□□ -0.55
USP35-207ENST00000530546 OR1E1P30953 314 aa11.61□□□□□ -0.55
USP35-207ENST00000530546 SLC1A2P43004 574 aa11.61□□□□□ -0.55
USP35-207ENST00000530546 GPR17Q13304 367 aa11.61□□□□□ -0.55
USP35-207ENST00000530546 POLD3Q15054 466 aaPredicted RBP11.61□□□□□ -0.55
USP35-207ENST00000530546 RANBP10Q6VN20 620 aa11.61□□□□□ -0.55
USP35-207ENST00000530546 FAM126BQ8IXS8 530 aa11.61□□□□□ -0.55
USP35-207ENST00000530546 UMODL1-AS1Q8N2C9 162 aa11.61□□□□□ -0.55
USP35-207ENST00000530546 ELMO2Q96JJ3 720 aa11.61□□□□□ -0.55
USP35-207ENST00000530546 PPP1R36Q96LQ0 422 aa11.61□□□□□ -0.55
USP35-207ENST00000530546 TSNARE1Q96NA8 513 aa11.61□□□□□ -0.55
USP35-207ENST00000530546 PRPF18Q99633 342 aaKnown RBP11.61□□□□□ -0.55
USP35-207ENST00000530546 GPR22Q99680 433 aa11.61□□□□□ -0.55
USP35-207ENST00000530546 SHCBP1LQ9BZQ2 653 aa11.61□□□□□ -0.55
USP35-207ENST00000530546 XRN2Q9H0D6 950 aaKnown RBP eCLIP11.61□□□□□ -0.55
USP35-207ENST00000530546 UNC93B1Q9H1C4 597 aa11.61□□□□□ -0.55
USP35-207ENST00000530546 SLC25A51Q9H1U9 297 aa11.61□□□□□ -0.55
USP35-207ENST00000530546 CDH22Q9UJ99 828 aa11.61□□□□□ -0.55
USP35-207ENST00000530546 PSMD13Q9UNM6 376 aa11.61□□□□□ -0.55
USP35-207ENST00000530546 AP4B1Q9Y6B7 739 aa11.61□□□□□ -0.55
USP35-207ENST00000530546 G3V2L1 256 aa11.61□□□□□ -0.55
USP35-207ENST00000530546 RAMP2O60895 175 aa11.61□□□□□ -0.55
USP35-207ENST00000530546 KLHL2O95198 593 aa11.61□□□□□ -0.55
USP35-207ENST00000530546 ZNF23P17027 643 aa11.61□□□□□ -0.55
USP35-207ENST00000530546 CCR10P46092 362 aa11.61□□□□□ -0.55
USP35-207ENST00000530546 COPAP53621 1224 aa11.61□□□□□ -0.55
USP35-207ENST00000530546 FRG1Q14331 258 aaKnown RBP11.61□□□□□ -0.55
USP35-207ENST00000530546 IHHQ14623 411 aa11.61□□□□□ -0.55
USP35-207ENST00000530546 MAP7D1Q3KQU3 841 aa11.61□□□□□ -0.55
USP35-207ENST00000530546 NPAS4Q8IUM7 802 aa11.61□□□□□ -0.55
USP35-207ENST00000530546 PQLC1Q8N2U9 271 aa11.61□□□□□ -0.55
USP35-207ENST00000530546 SPPL2BQ8TCT7 592 aa11.61□□□□□ -0.55
USP35-207ENST00000530546 SGF29Q96ES7 293 aa11.61□□□□□ -0.55
USP35-207ENST00000530546 TTPALQ9BTX7 342 aa11.61□□□□□ -0.55
USP35-207ENST00000530546 STN1Q9H668 368 aaKnown RBP11.61□□□□□ -0.55
USP35-207ENST00000530546 TBC1D23Q9NUY8 699 aa11.61□□□□□ -0.55
USP35-207ENST00000530546 TMEM248Q9NWD8 314 aa11.61□□□□□ -0.55
USP35-207ENST00000530546 POMPQ9Y244 141 aa11.61□□□□□ -0.55
USP35-207ENST00000530546 FAM32AQ9Y421 112 aaKnown RBP11.61□□□□□ -0.55
USP35-207ENST00000530546 ACTL7AQ9Y615 435 aa11.61□□□□□ -0.55
USP35-207ENST00000530546 FRMPD3Q5JV73 1810 aa11.61□□□□□ -0.55
USP35-207ENST00000530546 FAM95CA0A1B0GW59 222 aa11.6□□□□□ -0.55
USP35-207ENST00000530546 LOC101059915A0A1B0GWI6 518 aaPredicted RBP11.6□□□□□ -0.55
USP35-207ENST00000530546 SLC38A8A6NNN8 435 aa11.6□□□□□ -0.55
USP35-207ENST00000530546 WASH4PA8MWX3 477 aa11.6□□□□□ -0.55
USP35-207ENST00000530546 GRK2P25098 689 aa11.6□□□□□ -0.55
USP35-207ENST00000530546 PPARGP37231 505 aaPredicted RBP11.6□□□□□ -0.55
USP35-207ENST00000530546 ARCN1P48444 511 aaKnown RBP11.6□□□□□ -0.55
USP35-207ENST00000530546 NDST2P52849 883 aa11.6□□□□□ -0.55
USP35-207ENST00000530546 HTRA3P83110 453 aa11.6□□□□□ -0.55
USP35-207ENST00000530546 SLC25A3Q00325 362 aa11.6□□□□□ -0.55
USP35-207ENST00000530546 NRG1Q02297 640 aaPredicted RBP11.6□□□□□ -0.55
USP35-207ENST00000530546 ZNF423Q2M1K9 1284 aa11.6□□□□□ -0.55
USP35-207ENST00000530546 MFSD4BQ5TF39 518 aa11.6□□□□□ -0.55
USP35-207ENST00000530546 KDELC1Q6UW63 502 aa11.6□□□□□ -0.55
USP35-207ENST00000530546 MAVSQ7Z434 540 aa11.6□□□□□ -0.55
USP35-207ENST00000530546 LDB1Q86U70 411 aaPredicted RBP11.6□□□□□ -0.55
USP35-207ENST00000530546 CEP97Q8IW35 865 aa11.6□□□□□ -0.55
USP35-207ENST00000530546 MFSD6LQ8IWD5 586 aa11.6□□□□□ -0.55
USP35-207ENST00000530546 LGI2Q8N0V4 545 aa11.6□□□□□ -0.55
USP35-207ENST00000530546 SCAIQ8N9R8 606 aa11.6□□□□□ -0.55
USP35-207ENST00000530546 SLAIN1Q8ND83 568 aa11.6□□□□□ -0.55
USP35-207ENST00000530546 RIN3Q8TB24 985 aa11.6□□□□□ -0.55
USP35-207ENST00000530546 ZNF296Q8WUU4 475 aaPredicted RBP11.6□□□□□ -0.55
USP35-207ENST00000530546 ISL2Q96A47 359 aa11.6□□□□□ -0.55
USP35-207ENST00000530546 ACE2Q9BYF1 805 aaPredicted RBP11.6□□□□□ -0.55
USP35-207ENST00000530546 ELAC1Q9H777 363 aaKnown RBP11.6□□□□□ -0.55
USP35-207ENST00000530546 KIAA1522Q9P206 1035 aaPredicted RBP11.6□□□□□ -0.55
USP35-207ENST00000530546 PCDH10Q9P2E7 1040 aa11.6□□□□□ -0.55
USP35-207ENST00000530546 VWA8A3KMH1 1905 aa11.6□□□□□ -0.55
USP35-207ENST00000530546 MEI4A8MW99 385 aa11.6□□□□□ -0.55
USP35-207ENST00000530546 ATF6P18850 670 aa11.6□□□□□ -0.55
USP35-207ENST00000530546 DNAJB2P25686 324 aa11.6□□□□□ -0.55
USP35-207ENST00000530546 NADSYN1Q6IA69 706 aa11.6□□□□□ -0.55
USP35-207ENST00000530546 CLEC14AQ86T13 490 aa11.6□□□□□ -0.55
USP35-207ENST00000530546 RNF135Q8IUD6 432 aa11.6□□□□□ -0.55
USP35-207ENST00000530546 KLHDC8BQ8IXV7 354 aa11.6□□□□□ -0.55
USP35-207ENST00000530546 ZNF781Q8N8C0 355 aa11.6□□□□□ -0.55
USP35-207ENST00000530546 TTC16Q8NEE8 873 aa11.6□□□□□ -0.55
USP35-207ENST00000530546 IMP4Q96G21 291 aaKnown RBP11.6□□□□□ -0.55
USP35-207ENST00000530546 ZNF512Q96ME7 567 aaPredicted RBP11.6□□□□□ -0.55
USP35-207ENST00000530546 DEFB118Q96PH6 123 aa11.6□□□□□ -0.55
USP35-207ENST00000530546 MAN1C1Q9NR34 630 aa11.6□□□□□ -0.55
USP35-207ENST00000530546 OLA1Q9NTK5 396 aaKnown RBP11.6□□□□□ -0.55
USP35-207ENST00000530546 IL37Q9NZH6 218 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 90.9 ms