RNA–Protein interactions for RNA: ENST00000495308.5

FDPS-219, Transcript of farnesyl diphosphate synthase, human

TSL 2

Gene FDPS, Length 808 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FDPS-219	ENST00000495308	LENG8	Q96PV6	779 aa	Predicted RBP	13.63	□□□□□ -0.23
FDPS-219	ENST00000495308	TRIB3	Q96RU7	358 aa		13.63	□□□□□ -0.23
FDPS-219	ENST00000495308	TMEM121	Q9BTD3	319 aa		13.63	□□□□□ -0.23
FDPS-219	ENST00000495308	GBA3	Q9H227	469 aa		13.63	□□□□□ -0.23
FDPS-219	ENST00000495308	GAREM1	Q9H706	876 aa		13.63	□□□□□ -0.23
FDPS-219	ENST00000495308	USP29	Q9HBJ7	922 aa		13.63	□□□□□ -0.23
FDPS-219	ENST00000495308	MBNL1	Q9NR56	388 aa	Known RBP	13.63	□□□□□ -0.23
FDPS-219	ENST00000495308	TRHDE	Q9UKU6	1024 aa		13.63	□□□□□ -0.23
FDPS-219	ENST00000495308	PPIL1	Q9Y3C6	166 aa		13.63	□□□□□ -0.23
FDPS-219	ENST00000495308	SPEG	Q15772	3267 aa		13.63	□□□□□ -0.23
FDPS-219	ENST00000495308	CAPN8	A6NHC0	703 aa		13.62	□□□□□ -0.23
FDPS-219	ENST00000495308	FPGT	O14772	594 aa		13.62	□□□□□ -0.23
FDPS-219	ENST00000495308	RECQL5	O94762	991 aa	Predicted RBP	13.62	□□□□□ -0.23
FDPS-219	ENST00000495308	STK10	O94804	968 aa	Known RBP	13.62	□□□□□ -0.23
FDPS-219	ENST00000495308	HEXIM1	O94992	359 aa	Known RBP	13.62	□□□□□ -0.23
FDPS-219	ENST00000495308	NFKBIA	P25963	317 aa		13.62	□□□□□ -0.23
FDPS-219	ENST00000495308	PSMB4	P28070	264 aa		13.62	□□□□□ -0.23
FDPS-219	ENST00000495308	IGFALS	P35858	605 aa		13.62	□□□□□ -0.23
FDPS-219	ENST00000495308	NXPH1	P58417	271 aa		13.62	□□□□□ -0.23
FDPS-219	ENST00000495308	SNX1	Q13596	522 aa		13.62	□□□□□ -0.23
FDPS-219	ENST00000495308	ACOX1	Q15067	660 aa		13.62	□□□□□ -0.23
FDPS-219	ENST00000495308	IRF4	Q15306	451 aa		13.62	□□□□□ -0.23
FDPS-219	ENST00000495308	HLA-B	Q31612	363 aa		13.62	□□□□□ -0.23
FDPS-219	ENST00000495308	CRTC1	Q6UUV9	634 aa		13.62	□□□□□ -0.23
FDPS-219	ENST00000495308	KDELC1	Q6UW63	502 aa		13.62	□□□□□ -0.23
FDPS-219	ENST00000495308	HSD11B1L	Q7Z5J1	315 aa		13.62	□□□□□ -0.23
FDPS-219	ENST00000495308	ABI3BP	Q7Z7G0	1075 aa		13.62	□□□□□ -0.23
FDPS-219	ENST00000495308	SPATS2	Q86XZ4	545 aa	Known RBP	13.62	□□□□□ -0.23
FDPS-219	ENST00000495308	C17orf53	Q8N3J3	647 aa	Predicted RBP	13.62	□□□□□ -0.23
FDPS-219	ENST00000495308	DENND6B	Q8NEG7	585 aa		13.62	□□□□□ -0.23
FDPS-219	ENST00000495308	NETO1	Q8TDF5	533 aa		13.62	□□□□□ -0.23
FDPS-219	ENST00000495308	ASB12	Q8WXK4	309 aa		13.62	□□□□□ -0.23
FDPS-219	ENST00000495308	CENPT	Q96BT3	561 aa		13.62	□□□□□ -0.23
FDPS-219	ENST00000495308	RMDN1	Q96DB5	314 aa		13.62	□□□□□ -0.23
FDPS-219	ENST00000495308	IFT43	Q96FT9	208 aa		13.62	□□□□□ -0.23
FDPS-219	ENST00000495308	KLHDC7B	Q96G42	594 aa		13.62	□□□□□ -0.23
FDPS-219	ENST00000495308	MS4A14	Q96JA4	679 aa		13.62	□□□□□ -0.23
FDPS-219	ENST00000495308	FCRL5	Q96RD9	977 aa		13.62	□□□□□ -0.23
FDPS-219	ENST00000495308	FERMT1	Q9BQL6	677 aa		13.62	□□□□□ -0.23
FDPS-219	ENST00000495308	GORASP1	Q9BQQ3	440 aa		13.62	□□□□□ -0.23
FDPS-219	ENST00000495308	ZDHHC5	Q9C0B5	715 aa		13.62	□□□□□ -0.23
FDPS-219	ENST00000495308	FAM153A	Q9UHL3	310 aa		13.62	□□□□□ -0.23
FDPS-219	ENST00000495308	CDV3	Q9UKY7	258 aa	Known RBP	13.62	□□□□□ -0.23
FDPS-219	ENST00000495308	FNDC3A	Q9Y2H6	1198 aa	Known RBP	13.62	□□□□□ -0.23
FDPS-219	ENST00000495308	CFAP69	A5D8W1	941 aa		13.61	□□□□□ -0.23
FDPS-219	ENST00000495308		A6NNZ2	444 aa		13.61	□□□□□ -0.23
FDPS-219	ENST00000495308	ANKRD66	B4E2M5	251 aa		13.61	□□□□□ -0.23
FDPS-219	ENST00000495308	CER1	O95813	267 aa		13.61	□□□□□ -0.23
FDPS-219	ENST00000495308	PCCB	P05166	539 aa		13.61	□□□□□ -0.23
FDPS-219	ENST00000495308	PIRT	P0C851	137 aa		13.61	□□□□□ -0.23
FDPS-219	ENST00000495308	MSN	P26038	577 aa	Known RBP	13.61	□□□□□ -0.23
FDPS-219	ENST00000495308	WNT3A	P56704	352 aa		13.61	□□□□□ -0.23
FDPS-219	ENST00000495308	RPL26	P61254	145 aa	Known RBP	13.61	□□□□□ -0.23
FDPS-219	ENST00000495308	IL9R	Q01113	521 aa		13.61	□□□□□ -0.23
FDPS-219	ENST00000495308	CDK18	Q07002	472 aa		13.61	□□□□□ -0.23
FDPS-219	ENST00000495308	ARHGEF7	Q14155	803 aa		13.61	□□□□□ -0.23
FDPS-219	ENST00000495308	LRRC14	Q15048	493 aa		13.61	□□□□□ -0.23
FDPS-219	ENST00000495308	OASL	Q15646	514 aa	Known RBP	13.61	□□□□□ -0.23
FDPS-219	ENST00000495308	QPCT	Q16769	361 aa		13.61	□□□□□ -0.23
FDPS-219	ENST00000495308	LONRF2	Q1L5Z9	754 aa		13.61	□□□□□ -0.23
FDPS-219	ENST00000495308	WSCD2	Q2TBF2	565 aa		13.61	□□□□□ -0.23
FDPS-219	ENST00000495308	LRRC66	Q68CR7	880 aa		13.61	□□□□□ -0.23
FDPS-219	ENST00000495308	ITPRIPL1	Q6GPH6	555 aa		13.61	□□□□□ -0.23
FDPS-219	ENST00000495308	KYAT3	Q6YP21	454 aa	Known RBP	13.61	□□□□□ -0.23
FDPS-219	ENST00000495308		Q6ZSR6	202 aa		13.61	□□□□□ -0.23
FDPS-219	ENST00000495308	IQCH	Q86VS3	1027 aa		13.61	□□□□□ -0.23
FDPS-219	ENST00000495308	NDUFAF2	Q8N183	169 aa		13.61	□□□□□ -0.23
FDPS-219	ENST00000495308	SLC22A18AS	Q8N1D0	253 aa		13.61	□□□□□ -0.23
FDPS-219	ENST00000495308	PLA2G15	Q8NCC3	412 aa		13.61	□□□□□ -0.23
FDPS-219	ENST00000495308	IPMK	Q8NFU5	416 aa		13.61	□□□□□ -0.23
FDPS-219	ENST00000495308	SKA1	Q96BD8	255 aa		13.61	□□□□□ -0.23
FDPS-219	ENST00000495308	MRGPRX2	Q96LB1	330 aa		13.61	□□□□□ -0.23
FDPS-219	ENST00000495308	COQ10A	Q96MF6	247 aa		13.61	□□□□□ -0.23
FDPS-219	ENST00000495308	SPATA13	Q96N96	652 aa		13.61	□□□□□ -0.23
FDPS-219	ENST00000495308	MLPH	Q9BV36	600 aa	Predicted RBP	13.61	□□□□□ -0.23
FDPS-219	ENST00000495308	C1QTNF7	Q9BXJ2	289 aa		13.61	□□□□□ -0.23
FDPS-219	ENST00000495308	ADGRE3	Q9BY15	652 aa		13.61	□□□□□ -0.23
FDPS-219	ENST00000495308	CAAP1	Q9H8G2	361 aa		13.61	□□□□□ -0.23
FDPS-219	ENST00000495308	SMARCAL1	Q9NZC9	954 aa		13.61	□□□□□ -0.23
FDPS-219	ENST00000495308	RPL26L1	Q9UNX3	145 aa	Known RBP	13.61	□□□□□ -0.23
FDPS-219	ENST00000495308	HS3ST3A1	Q9Y663	406 aa		13.61	□□□□□ -0.23
FDPS-219	ENST00000495308	C1orf232	A0A0U1RR37	186 aa		13.6	□□□□□ -0.23
FDPS-219	ENST00000495308	C5orf60	A6NFR6	353 aa		13.6	□□□□□ -0.23
FDPS-219	ENST00000495308	OPHN1	O60890	802 aa		13.6	□□□□□ -0.23
FDPS-219	ENST00000495308	CLDN7	O95471	211 aa		13.6	□□□□□ -0.23
FDPS-219	ENST00000495308	C1S	P09871	688 aa		13.6	□□□□□ -0.23
FDPS-219	ENST00000495308	ETV3	P41162	512 aa		13.6	□□□□□ -0.23
FDPS-219	ENST00000495308	CHRNA4	P43681	627 aa		13.6	□□□□□ -0.23
FDPS-219	ENST00000495308	LIMK1	P53667	647 aa		13.6	□□□□□ -0.23
FDPS-219	ENST00000495308	GNG11	P61952	73 aa		13.6	□□□□□ -0.23
FDPS-219	ENST00000495308	OLIG2	Q13516	323 aa		13.6	□□□□□ -0.23
FDPS-219	ENST00000495308	AGER	Q15109	404 aa		13.6	□□□□□ -0.23
FDPS-219	ENST00000495308	SLC14A2	Q15849	920 aa		13.6	□□□□□ -0.23
FDPS-219	ENST00000495308	ZNF423	Q2M1K9	1284 aa		13.6	□□□□□ -0.23
FDPS-219	ENST00000495308	TPRG1L	Q5T0D9	272 aa		13.6	□□□□□ -0.23
FDPS-219	ENST00000495308	FAXC	Q5TGI0	409 aa		13.6	□□□□□ -0.23
FDPS-219	ENST00000495308	IL27RA	Q6UWB1	636 aa		13.6	□□□□□ -0.23
FDPS-219	ENST00000495308	ARHGEF18	Q6ZSZ5	1173 aa		13.6	□□□□□ -0.23
FDPS-219	ENST00000495308	RFLNA	Q6ZTI6	216 aa		13.6	□□□□□ -0.23
FDPS-219	ENST00000495308	PRUNE1	Q86TP1	453 aa		13.6	□□□□□ -0.23

Retrieved 100 of 20,778 RNA–protein pairs in 90.3 ms