RNA–Protein interactions for RNA: ENST00000454428.5

UBE2D4-209, Transcript of ubiquitin conjugating enzyme E2 D4 (putative), humanhuman

TSL 3

Gene UBE2D4, Length 288 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4-209ENST00000454428 XPAP23025 273 aaPredicted RBP17.25■□□□□ 0.35
UBE2D4-209ENST00000454428 MPSTP25325 297 aa17.25■□□□□ 0.35
UBE2D4-209ENST00000454428 TRA2AQ13595 282 aaKnown RBP eCLIP17.25■□□□□ 0.35
UBE2D4-209ENST00000454428 C15orf59Q2T9L4 293 aaPredicted RBP17.25■□□□□ 0.35
UBE2D4-209ENST00000454428 LACTB2Q53H82 288 aaPredicted RBP17.25■□□□□ 0.35
UBE2D4-209ENST00000454428 ARCQ7LC44 396 aa17.25■□□□□ 0.35
UBE2D4-209ENST00000454428 FAM71AQ8IYT1 594 aa17.25■□□□□ 0.35
UBE2D4-209ENST00000454428 BMPERQ8N8U9 685 aa17.25■□□□□ 0.35
UBE2D4-209ENST00000454428 TMEM35BQ8NCS4 154 aa17.25■□□□□ 0.35
UBE2D4-209ENST00000454428 AGBL5Q8NDL9 886 aa17.25■□□□□ 0.35
UBE2D4-209ENST00000454428 OR4D9Q8NGE8 314 aa17.25■□□□□ 0.35
UBE2D4-209ENST00000454428 KIAA1524Q8TCG1 905 aa17.25■□□□□ 0.35
UBE2D4-209ENST00000454428 ZDHHC1Q8WTX9 485 aa17.25■□□□□ 0.35
UBE2D4-209ENST00000454428 CASKIN2Q8WXE0 1202 aa17.25■□□□□ 0.35
UBE2D4-209ENST00000454428 SLC39A1Q9NY26 324 aa17.25■□□□□ 0.35
UBE2D4-209ENST00000454428 ATP8A1Q9Y2Q0 1164 aa17.25■□□□□ 0.35
UBE2D4-209ENST00000454428 ANKRD17O75179 2603 aaKnown RBP17.25■□□□□ 0.35
UBE2D4-209ENST00000454428 PRSS38A1L453 326 aa17.24■□□□□ 0.35
UBE2D4-209ENST00000454428 RHPN2P1A8MT19 583 aa17.24■□□□□ 0.35
UBE2D4-209ENST00000454428 B4E171 279 aa17.24■□□□□ 0.35
UBE2D4-209ENST00000454428 PPM1DO15297 605 aa17.24■□□□□ 0.35
UBE2D4-209ENST00000454428 CAPN5O15484 640 aaPredicted RBP17.24■□□□□ 0.35
UBE2D4-209ENST00000454428 CCNB1P14635 433 aa17.24■□□□□ 0.35
UBE2D4-209ENST00000454428 TSPAN7P41732 249 aa17.24■□□□□ 0.35
UBE2D4-209ENST00000454428 UQCRFS1P47985 274 aa17.24■□□□□ 0.35
UBE2D4-209ENST00000454428 MLLT10P55197 1068 aa17.24■□□□□ 0.35
UBE2D4-209ENST00000454428 KLRB1Q12918 225 aa17.24■□□□□ 0.35
UBE2D4-209ENST00000454428 SQSTM1Q13501 440 aa17.24■□□□□ 0.35
UBE2D4-209ENST00000454428 DEFB109BQ30KR1 87 aa17.24■□□□□ 0.35
UBE2D4-209ENST00000454428 ATP1A1-AS1Q5TC04 95 aa17.24■□□□□ 0.35
UBE2D4-209ENST00000454428 ANKS6Q68DC2 871 aa17.24■□□□□ 0.35
UBE2D4-209ENST00000454428 SMYD5Q6GMV2 418 aa17.24■□□□□ 0.35
UBE2D4-209ENST00000454428 DPY19L2P1Q6NXN4 242 aa17.24■□□□□ 0.35
UBE2D4-209ENST00000454428 GBP6Q6ZN66 633 aa17.24■□□□□ 0.35
UBE2D4-209ENST00000454428 TIPARPQ7Z3E1 657 aaKnown RBP17.24■□□□□ 0.35
UBE2D4-209ENST00000454428 UNC5BQ8IZJ1 945 aa17.24■□□□□ 0.35
UBE2D4-209ENST00000454428 CCDC185Q8N715 623 aa17.24■□□□□ 0.35
UBE2D4-209ENST00000454428 PTCD2Q8WV60 388 aaKnown RBP17.24■□□□□ 0.35
UBE2D4-209ENST00000454428 TBC1D31Q96DN5 1066 aa17.24■□□□□ 0.35
UBE2D4-209ENST00000454428 TIGD1Q96MW7 591 aa17.24■□□□□ 0.35
UBE2D4-209ENST00000454428 KCNK4Q9NYG8 393 aa17.24■□□□□ 0.35
UBE2D4-209ENST00000454428 DNAJC12Q9UKB3 198 aa17.24■□□□□ 0.35
UBE2D4-209ENST00000454428 TP53TG5Q9Y2B4 290 aa17.24■□□□□ 0.35
UBE2D4-209ENST00000454428 RP1L1Q8IWN7 2480 aaPredicted RBP17.24■□□□□ 0.35
UBE2D4-209ENST00000454428 IGHV1OR21-1A0A087WYE8 117 aa17.23■□□□□ 0.35
UBE2D4-209ENST00000454428 CFAP69A5D8W1 941 aa17.23■□□□□ 0.35
UBE2D4-209ENST00000454428 PLEKP08567 350 aaPredicted RBP17.23■□□□□ 0.35
UBE2D4-209ENST00000454428 KRT7P08729 469 aa17.23■□□□□ 0.35
UBE2D4-209ENST00000454428 RNF224P0DH78 156 aa17.23■□□□□ 0.35
UBE2D4-209ENST00000454428 GPR3P46089 330 aa17.23■□□□□ 0.35
UBE2D4-209ENST00000454428 CDO1Q16878 200 aa17.23■□□□□ 0.35
UBE2D4-209ENST00000454428 EXOC3L4Q17RC7 722 aa17.23■□□□□ 0.35
UBE2D4-209ENST00000454428 CCDC14Q49A88 953 aa17.23■□□□□ 0.35
UBE2D4-209ENST00000454428 ERAP2Q6P179 960 aa17.23■□□□□ 0.35
UBE2D4-209ENST00000454428 CAMK1DQ8IU85 385 aa17.23■□□□□ 0.35
UBE2D4-209ENST00000454428 NAGSQ8N159 534 aa17.23■□□□□ 0.35
UBE2D4-209ENST00000454428 APOBEC4Q8WW27 367 aaKnown RBP17.23■□□□□ 0.35
UBE2D4-209ENST00000454428 RTP4Q96DX8 246 aa17.23■□□□□ 0.35
UBE2D4-209ENST00000454428 ASPSCR1Q9BZE9 553 aa17.23■□□□□ 0.35
UBE2D4-209ENST00000454428 GPN2Q9H9Y4 310 aaPredicted RBP17.23■□□□□ 0.35
UBE2D4-209ENST00000454428 TAAR2Q9P1P5 351 aa17.23■□□□□ 0.35
UBE2D4-209ENST00000454428 PRRC2CQ9Y520 2896 aaKnown RBP17.22■□□□□ 0.35
UBE2D4-209ENST00000454428 EFCAB7A8K855 629 aa17.22■□□□□ 0.35
UBE2D4-209ENST00000454428 CYP11B1P15538 503 aa17.22■□□□□ 0.35
UBE2D4-209ENST00000454428 KELP23276 732 aa17.22■□□□□ 0.35
UBE2D4-209ENST00000454428 AK4P27144 223 aaPredicted RBP17.22■□□□□ 0.35
UBE2D4-209ENST00000454428 STAT1P42224 750 aa17.22■□□□□ 0.35
UBE2D4-209ENST00000454428 RGRP47804 291 aa17.22■□□□□ 0.35
UBE2D4-209ENST00000454428 PAK1Q13153 545 aa17.22■□□□□ 0.35
UBE2D4-209ENST00000454428 DCAF12Q5T6F0 453 aa17.22■□□□□ 0.35
UBE2D4-209ENST00000454428 BRAT1Q6PJG6 821 aa17.22■□□□□ 0.35
UBE2D4-209ENST00000454428 LIPIQ6XZB0 460 aa17.22■□□□□ 0.35
UBE2D4-209ENST00000454428 DNAAF5Q86Y56 855 aa17.22■□□□□ 0.35
UBE2D4-209ENST00000454428 NLGN4XQ8N0W4 816 aa17.22■□□□□ 0.35
UBE2D4-209ENST00000454428 CCDC112Q8NEF3 446 aa17.22■□□□□ 0.35
UBE2D4-209ENST00000454428 NLGN4YQ8NFZ3 816 aaPredicted RBP17.22■□□□□ 0.35
UBE2D4-209ENST00000454428 ZNF641Q96N77 438 aaPredicted RBP17.22■□□□□ 0.35
UBE2D4-209ENST00000454428 NCAPGQ9BPX3 1015 aa17.22■□□□□ 0.35
UBE2D4-209ENST00000454428 CARS2Q9HA77 564 aaKnown RBP17.22■□□□□ 0.35
UBE2D4-209ENST00000454428 PDFQ9HBH1 243 aa17.22■□□□□ 0.35
UBE2D4-209ENST00000454428 METTL5Q9NRN9 209 aaKnown RBP17.22■□□□□ 0.35
UBE2D4-209ENST00000454428 MOSPD1Q9UJG1 213 aa17.22■□□□□ 0.35
UBE2D4-209ENST00000454428 ABCA12Q86UK0 2595 aa17.21■□□□□ 0.35
UBE2D4-209ENST00000454428 GTPBP10A4D1E9 387 aaKnown RBP17.21■□□□□ 0.35
UBE2D4-209ENST00000454428 CEACAM5P06731 702 aa17.21■□□□□ 0.35
UBE2D4-209ENST00000454428 CSTF2P33240 577 aaKnown RBP eCLIP17.21■□□□□ 0.35
UBE2D4-209ENST00000454428 HDAC4P56524 1084 aa17.21■□□□□ 0.35
UBE2D4-209ENST00000454428 TAF3Q5VWG9 929 aa17.21■□□□□ 0.35
UBE2D4-209ENST00000454428 PNCKQ6P2M8 343 aa17.21■□□□□ 0.35
UBE2D4-209ENST00000454428 ATCAYQ86WG3 371 aa17.21■□□□□ 0.35
UBE2D4-209ENST00000454428 FAM129CQ86XR2 697 aa17.21■□□□□ 0.35
UBE2D4-209ENST00000454428 ZNF354CQ86Y25 554 aa17.21■□□□□ 0.35
UBE2D4-209ENST00000454428 PYROXD2Q8N2H3 581 aa17.21■□□□□ 0.35
UBE2D4-209ENST00000454428 RTL3Q8N8U3 475 aaKnown RBP17.21■□□□□ 0.35
UBE2D4-209ENST00000454428 GPT2Q8TD30 523 aa17.21■□□□□ 0.35
UBE2D4-209ENST00000454428 RXFP2Q8WXD0 754 aa17.21■□□□□ 0.35
UBE2D4-209ENST00000454428 CPA5Q8WXQ8 436 aa17.21■□□□□ 0.35
UBE2D4-209ENST00000454428 CENPIQ92674 756 aaPredicted RBP17.21■□□□□ 0.35
UBE2D4-209ENST00000454428 WDR26Q9H7D7 661 aa17.21■□□□□ 0.35
UBE2D4-209ENST00000454428 PDP2Q9P2J9 529 aa17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 68.3 ms