RNA–Protein interactions for RNA: ENST00000450940.5

USP40-207, Transcript of ubiquitin specific peptidase 40, humanhuman

TSL 3

Gene USP40, Length 670 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP40-207ENST00000450940 ANXA6P08133 673 aa19.45■□□□□ 0.7
USP40-207ENST00000450940 CES1P23141 567 aa19.45■□□□□ 0.7
USP40-207ENST00000450940 VIPR1P32241 457 aa19.45■□□□□ 0.7
USP40-207ENST00000450940 ARHGAP25P42331 645 aa19.45■□□□□ 0.7
USP40-207ENST00000450940 C1orf61Q13536 156 aa19.45■□□□□ 0.7
USP40-207ENST00000450940 TCEAL1Q15170 157 aa19.45■□□□□ 0.7
USP40-207ENST00000450940 IFI16Q16666 785 aaKnown RBP19.45■□□□□ 0.7
USP40-207ENST00000450940 C6orf132Q5T0Z8 1188 aa19.45■□□□□ 0.7
USP40-207ENST00000450940 ESRP1Q6NXG1 681 aaKnown RBP19.45■□□□□ 0.7
USP40-207ENST00000450940 VSIG1Q86XK7 387 aa19.45■□□□□ 0.7
USP40-207ENST00000450940 PAF1Q8N7H5 531 aa19.45■□□□□ 0.7
USP40-207ENST00000450940 TSACCQ96A04 125 aaPredicted RBP19.45■□□□□ 0.7
USP40-207ENST00000450940 SCRN2Q96FV2 425 aa19.45■□□□□ 0.7
USP40-207ENST00000450940 WDR92Q96MX6 357 aa19.45■□□□□ 0.7
USP40-207ENST00000450940 MCCC1Q96RQ3 725 aaPredicted RBP19.45■□□□□ 0.7
USP40-207ENST00000450940 RAXQ9Y2V3 346 aa19.45■□□□□ 0.7
USP40-207ENST00000450940 GPSM3Q9Y4H4 160 aa19.45■□□□□ 0.7
USP40-207ENST00000450940 DGKBQ9Y6T7 804 aa19.45■□□□□ 0.7
USP40-207ENST00000450940 FZD6O60353 706 aa19.44■□□□□ 0.7
USP40-207ENST00000450940 HEXIM1O94992 359 aaKnown RBP19.44■□□□□ 0.7
USP40-207ENST00000450940 PCCBP05166 539 aa19.44■□□□□ 0.7
USP40-207ENST00000450940 KDELR1P24390 212 aa19.44■□□□□ 0.7
USP40-207ENST00000450940 NFKBIAP25963 317 aa19.44■□□□□ 0.7
USP40-207ENST00000450940 GJC1P36383 396 aa19.44■□□□□ 0.7
USP40-207ENST00000450940 SRP54P61011 504 aaKnown RBP19.44■□□□□ 0.7
USP40-207ENST00000450940 MESDQ14696 234 aa19.44■□□□□ 0.7
USP40-207ENST00000450940 ELOCQ15369 112 aa19.44■□□□□ 0.7
USP40-207ENST00000450940 CNGA3Q16281 694 aa19.44■□□□□ 0.7
USP40-207ENST00000450940 TIGD7Q6NT04 549 aaPredicted RBP19.44■□□□□ 0.7
USP40-207ENST00000450940 SARM1Q6SZW1 724 aa19.44■□□□□ 0.7
USP40-207ENST00000450940 ENPP7Q6UWV6 458 aa19.44■□□□□ 0.7
USP40-207ENST00000450940 HID1Q8IV36 788 aa19.44■□□□□ 0.7
USP40-207ENST00000450940 CNGA4Q8IV77 575 aa19.44■□□□□ 0.7
USP40-207ENST00000450940 RHOT2Q8IXI1 618 aa19.44■□□□□ 0.7
USP40-207ENST00000450940 IFI44Q8TCB0 444 aa19.44■□□□□ 0.7
USP40-207ENST00000450940 PIH1D2Q8WWB5 315 aa19.44■□□□□ 0.7
USP40-207ENST00000450940 RAPGEF5Q92565 580 aa19.44■□□□□ 0.7
USP40-207ENST00000450940 GLMNQ92990 594 aa19.44■□□□□ 0.7
USP40-207ENST00000450940 FUBP1Q96AE4 644 aaKnown RBP19.44■□□□□ 0.7
USP40-207ENST00000450940 RNF157Q96PX1 679 aa19.44■□□□□ 0.7
USP40-207ENST00000450940 SEMA3CQ99985 751 aa19.44■□□□□ 0.7
USP40-207ENST00000450940 NT5MQ9NPB1 228 aa19.44■□□□□ 0.7
USP40-207ENST00000450940 SPTLC3Q9NUV7 552 aa19.44■□□□□ 0.7
USP40-207ENST00000450940 INTUQ9ULD6 942 aa19.44■□□□□ 0.7
USP40-207ENST00000450940 LAMA5O15230 3695 aa19.43■□□□□ 0.7
USP40-207ENST00000450940 ZFYVE26Q68DK2 2539 aa19.43■□□□□ 0.7
USP40-207ENST00000450940 A8MX80 341 aa19.43■□□□□ 0.7
USP40-207ENST00000450940 PSMD11O00231 422 aa19.43■□□□□ 0.7
USP40-207ENST00000450940 TNFRSF10CO14798 259 aa19.43■□□□□ 0.7
USP40-207ENST00000450940 ALPIP09923 528 aa19.43■□□□□ 0.7
USP40-207ENST00000450940 RPIAP49247 311 aa19.43■□□□□ 0.7
USP40-207ENST00000450940 GBE1Q04446 702 aa19.43■□□□□ 0.7
USP40-207ENST00000450940 SLC10A2Q12908 348 aaPredicted RBP19.43■□□□□ 0.7
USP40-207ENST00000450940 IHHQ14623 411 aa19.43■□□□□ 0.7
USP40-207ENST00000450940 ACOX1Q15067 660 aa19.43■□□□□ 0.7
USP40-207ENST00000450940 NR0B2Q15466 257 aa19.43■□□□□ 0.7
USP40-207ENST00000450940 CDKN3Q16667 212 aa19.43■□□□□ 0.7
USP40-207ENST00000450940 ARMC12Q5T9G4 340 aa19.43■□□□□ 0.7
USP40-207ENST00000450940 PNCKQ6P2M8 343 aa19.43■□□□□ 0.7
USP40-207ENST00000450940 GUSBP11Q6P575 273 aa19.43■□□□□ 0.7
USP40-207ENST00000450940 NYAP1Q6ZVC0 841 aa19.43■□□□□ 0.7
USP40-207ENST00000450940 SLC35F3Q8IY50 421 aa19.43■□□□□ 0.7
USP40-207ENST00000450940 PDCD6IPQ8WUM4 868 aaKnown RBP19.43■□□□□ 0.7
USP40-207ENST00000450940 RBM15Q96T37 977 aaKnown RBP eCLIP19.43■□□□□ 0.7
USP40-207ENST00000450940 POLR1EQ9GZS1 481 aaKnown RBP19.43■□□□□ 0.7
USP40-207ENST00000450940 KLQ9UEF7 1012 aa19.43■□□□□ 0.7
USP40-207ENST00000450940 TMEM202A6NGA9 273 aa19.42■□□□□ 0.7
USP40-207ENST00000450940 C3orf70A6NLC5 250 aaPredicted RBP19.42■□□□□ 0.7
USP40-207ENST00000450940 AKR1B15C9JRZ8 316 aaPredicted RBP19.42■□□□□ 0.7
USP40-207ENST00000450940 CACNB4O00305 520 aaPredicted RBP19.42■□□□□ 0.7
USP40-207ENST00000450940 CELA2BP08218 269 aaPredicted RBP19.42■□□□□ 0.7
USP40-207ENST00000450940 PDHA1P08559 390 aa19.42■□□□□ 0.7
USP40-207ENST00000450940 CYP2A6P11509 494 aaPredicted RBP19.42■□□□□ 0.7
USP40-207ENST00000450940 MX2P20592 715 aa19.42■□□□□ 0.7
USP40-207ENST00000450940 LHCGRP22888 699 aa19.42■□□□□ 0.7
USP40-207ENST00000450940 KELP23276 732 aa19.42■□□□□ 0.7
USP40-207ENST00000450940 LRRC38Q5VT99 294 aa19.42■□□□□ 0.7
USP40-207ENST00000450940 KCTD16Q68DU8 428 aa19.42■□□□□ 0.7
USP40-207ENST00000450940 EFL1Q7Z2Z2 1120 aaKnown RBP19.42■□□□□ 0.7
USP40-207ENST00000450940 PELI3Q8N2H9 469 aa19.42■□□□□ 0.7
USP40-207ENST00000450940 OR56A4Q8NGH8 313 aa19.42■□□□□ 0.7
USP40-207ENST00000450940 TPCN2Q8NHX9 752 aa19.42■□□□□ 0.7
USP40-207ENST00000450940 OR1E3Q8WZA6 343 aa19.42■□□□□ 0.7
USP40-207ENST00000450940 HDAC11Q96DB2 347 aa19.42■□□□□ 0.7
USP40-207ENST00000450940 ABCG4Q9H172 646 aa19.42■□□□□ 0.7
USP40-207ENST00000450940 DTLQ9NZJ0 730 aa19.42■□□□□ 0.7
USP40-207ENST00000450940 RAI2Q9Y5P3 530 aa19.42■□□□□ 0.7
USP40-207ENST00000450940 A0A087WV48 116 aa19.41■□□□□ 0.7
USP40-207ENST00000450940 CPED1A4D0V7 1026 aa19.41■□□□□ 0.7
USP40-207ENST00000450940 NPIPB15A6NHN6 443 aaPredicted RBP19.41■□□□□ 0.7
USP40-207ENST00000450940 MAP3K6O95382 1288 aa19.41■□□□□ 0.7
USP40-207ENST00000450940 TNFP01375 233 aa19.41■□□□□ 0.7
USP40-207ENST00000450940 CTSEP14091 401 aa19.41■□□□□ 0.7
USP40-207ENST00000450940 CCNB1P14635 433 aa19.41■□□□□ 0.7
USP40-207ENST00000450940 TEAD1P28347 426 aa19.41■□□□□ 0.7
USP40-207ENST00000450940 HSD11B1LQ7Z5J1 315 aa19.41■□□□□ 0.7
USP40-207ENST00000450940 TECPR1Q7Z6L1 1165 aa19.41■□□□□ 0.7
USP40-207ENST00000450940 ARRDC2Q8TBH0 407 aa19.41■□□□□ 0.7
USP40-207ENST00000450940 MAPK15Q8TD08 544 aa19.41■□□□□ 0.7
USP40-207ENST00000450940 SCG3Q8WXD2 468 aaKnown RBP19.41■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms