RNA–Protein interactions for RNA: ENST00000419334.1

EPCAM-203, Transcript of epithelial cell adhesion molecule, humanhuman

TSL 3

Gene EPCAM, Length 609 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPCAM-203ENST00000419334 LHCGRP22888 699 aa17.7■□□□□ 0.42
EPCAM-203ENST00000419334 CXCR5P32302 372 aa17.7■□□□□ 0.42
EPCAM-203ENST00000419334 HNF1BP35680 557 aa17.7■□□□□ 0.42
EPCAM-203ENST00000419334 CLDN2P57739 230 aa17.7■□□□□ 0.42
EPCAM-203ENST00000419334 NXPH1P58417 271 aa17.7■□□□□ 0.42
EPCAM-203ENST00000419334 CDK18Q07002 472 aa17.7■□□□□ 0.42
EPCAM-203ENST00000419334 SIX1Q15475 284 aaPredicted RBP17.7■□□□□ 0.42
EPCAM-203ENST00000419334 OASLQ15646 514 aaKnown RBP17.7■□□□□ 0.42
EPCAM-203ENST00000419334 PCSK7Q16549 785 aa17.7■□□□□ 0.42
EPCAM-203ENST00000419334 QPCTQ16769 361 aa17.7■□□□□ 0.42
EPCAM-203ENST00000419334 HLA-BQ31612 363 aa17.7■□□□□ 0.42
EPCAM-203ENST00000419334 CBARPQ8N350 705 aaPredicted RBP17.7■□□□□ 0.42
EPCAM-203ENST00000419334 ATG4AQ8WYN0 398 aa17.7■□□□□ 0.42
EPCAM-203ENST00000419334 KLHDC7BQ96G42 594 aa17.7■□□□□ 0.42
EPCAM-203ENST00000419334 BMFQ96LC9 184 aa17.7■□□□□ 0.42
EPCAM-203ENST00000419334 SPATA13Q96N96 652 aa17.7■□□□□ 0.42
EPCAM-203ENST00000419334 LYSMD1Q96S90 227 aa17.7■□□□□ 0.42
EPCAM-203ENST00000419334 GAREM1Q9H706 876 aa17.7■□□□□ 0.42
EPCAM-203ENST00000419334 GPR27Q9NS67 375 aa17.7■□□□□ 0.42
EPCAM-203ENST00000419334 DNAAF2Q9NVR5 837 aaKnown RBP17.7■□□□□ 0.42
EPCAM-203ENST00000419334 CDV3Q9UKY7 258 aaKnown RBP17.7■□□□□ 0.42
EPCAM-203ENST00000419334 ZKSCAN5Q9Y2L8 839 aa17.7■□□□□ 0.42
EPCAM-203ENST00000419334 ASCC3Q8N3C0 2202 aaKnown RBP17.7■□□□□ 0.42
EPCAM-203ENST00000419334 POM121BA6NF01 834 aa17.69■□□□□ 0.42
EPCAM-203ENST00000419334 C4orf47A7E2U8 309 aa17.69■□□□□ 0.42
EPCAM-203ENST00000419334 SLC30A4O14863 429 aa17.69■□□□□ 0.42
EPCAM-203ENST00000419334 CEP104O60308 925 aa17.69■□□□□ 0.42
EPCAM-203ENST00000419334 OPHN1O60890 802 aa17.69■□□□□ 0.42
EPCAM-203ENST00000419334 PMPCBO75439 489 aa17.69■□□□□ 0.42
EPCAM-203ENST00000419334 RECQL5O94762 991 aaPredicted RBP17.69■□□□□ 0.42
EPCAM-203ENST00000419334 ATP1A1P05023 1023 aaKnown RBP17.69■□□□□ 0.42
EPCAM-203ENST00000419334 THEGLP0DJG4 465 aa17.69■□□□□ 0.42
EPCAM-203ENST00000419334 ZNF30P17039 623 aa17.69■□□□□ 0.42
EPCAM-203ENST00000419334 GM2AP17900 193 aa17.69■□□□□ 0.42
EPCAM-203ENST00000419334 IGFALSP35858 605 aa17.69■□□□□ 0.42
EPCAM-203ENST00000419334 MPP3Q13368 585 aa17.69■□□□□ 0.42
EPCAM-203ENST00000419334 ARHGEF7Q14155 803 aa17.69■□□□□ 0.42
EPCAM-203ENST00000419334 LRRC14Q15048 493 aa17.69■□□□□ 0.42
EPCAM-203ENST00000419334 PTPRRQ15256 657 aa17.69■□□□□ 0.42
EPCAM-203ENST00000419334 RSPO4Q2I0M5 234 aaPredicted RBP17.69■□□□□ 0.42
EPCAM-203ENST00000419334 ZNF423Q2M1K9 1284 aa17.69■□□□□ 0.42
EPCAM-203ENST00000419334 KDELC1Q6UW63 502 aa17.69■□□□□ 0.42
EPCAM-203ENST00000419334 TSPAN33Q86UF1 283 aa17.69■□□□□ 0.42
EPCAM-203ENST00000419334 OR13H1Q8NG92 308 aa17.69■□□□□ 0.42
EPCAM-203ENST00000419334 OR2I1PQ8NGU4 316 aa17.69■□□□□ 0.42
EPCAM-203ENST00000419334 CCDC110Q8TBZ0 833 aa17.69■□□□□ 0.42
EPCAM-203ENST00000419334 RMDN1Q96DB5 314 aa17.69■□□□□ 0.42
EPCAM-203ENST00000419334 IFT43Q96FT9 208 aa17.69■□□□□ 0.42
EPCAM-203ENST00000419334 OXNAD1Q96HP4 312 aaPredicted RBP17.69■□□□□ 0.42
EPCAM-203ENST00000419334 PBKQ96KB5 322 aa17.69■□□□□ 0.42
EPCAM-203ENST00000419334 COQ10AQ96MF6 247 aa17.69■□□□□ 0.42
EPCAM-203ENST00000419334 TMEM121Q9BTD3 319 aa17.69■□□□□ 0.42
EPCAM-203ENST00000419334 MLPHQ9BV36 600 aaPredicted RBP17.69■□□□□ 0.42
EPCAM-203ENST00000419334 ERVMER34-1Q9H9K5 563 aa17.69■□□□□ 0.42
EPCAM-203ENST00000419334 GDF3Q9NR23 364 aa17.69■□□□□ 0.42
EPCAM-203ENST00000419334 KCND1Q9NSA2 647 aa17.69■□□□□ 0.42
EPCAM-203ENST00000419334 KCTD5Q9NXV2 234 aa17.69■□□□□ 0.42
EPCAM-203ENST00000419334 UBP1Q9NZI7 540 aa17.69■□□□□ 0.42
EPCAM-203ENST00000419334 TOR1BO14657 336 aa17.68■□□□□ 0.42
EPCAM-203ENST00000419334 DFNA5O60443 496 aa17.68■□□□□ 0.42
EPCAM-203ENST00000419334 GCATO75600 419 aa17.68■□□□□ 0.42
EPCAM-203ENST00000419334 ANXA9O76027 345 aa17.68■□□□□ 0.42
EPCAM-203ENST00000419334 NDST3O95803 873 aa17.68■□□□□ 0.42
EPCAM-203ENST00000419334 EPOP01588 193 aa17.68■□□□□ 0.42
EPCAM-203ENST00000419334 ZNF883P0CG24 379 aa17.68■□□□□ 0.42
EPCAM-203ENST00000419334 STIP1P31948 543 aaKnown RBP17.68■□□□□ 0.42
EPCAM-203ENST00000419334 RABIFP47224 123 aa17.68■□□□□ 0.42
EPCAM-203ENST00000419334 GDF10P55107 478 aa17.68■□□□□ 0.42
EPCAM-203ENST00000419334 WNT3AP56704 352 aa17.68■□□□□ 0.42
EPCAM-203ENST00000419334 PFN3P60673 137 aa17.68■□□□□ 0.42
EPCAM-203ENST00000419334 GALNT3Q14435 633 aa17.68■□□□□ 0.42
EPCAM-203ENST00000419334 ACOX1Q15067 660 aa17.68■□□□□ 0.42
EPCAM-203ENST00000419334 IRF4Q15306 451 aa17.68■□□□□ 0.42
EPCAM-203ENST00000419334 CCNG2Q16589 344 aa17.68■□□□□ 0.42
EPCAM-203ENST00000419334 WSCD2Q2TBF2 565 aa17.68■□□□□ 0.42
EPCAM-203ENST00000419334 LRRC66Q68CR7 880 aa17.68■□□□□ 0.42
EPCAM-203ENST00000419334 CRTC1Q6UUV9 634 aa17.68■□□□□ 0.42
EPCAM-203ENST00000419334 Q6ZSR6 202 aa17.68■□□□□ 0.42
EPCAM-203ENST00000419334 PTAR1Q7Z6K3 402 aaPredicted RBP17.68■□□□□ 0.42
EPCAM-203ENST00000419334 SPATS2Q86XZ4 545 aaKnown RBP17.68■□□□□ 0.42
EPCAM-203ENST00000419334 DCP2Q8IU60 420 aaKnown RBP17.68■□□□□ 0.42
EPCAM-203ENST00000419334 RASGEF1CQ8N431 466 aa17.68■□□□□ 0.42
EPCAM-203ENST00000419334 FAM71DQ8N9W8 422 aa17.68■□□□□ 0.42
EPCAM-203ENST00000419334 C1orf54Q8WWF1 131 aa17.68■□□□□ 0.42
EPCAM-203ENST00000419334 RTP4Q96DX8 246 aa17.68■□□□□ 0.42
EPCAM-203ENST00000419334 MRGPRX2Q96LB1 330 aa17.68■□□□□ 0.42
EPCAM-203ENST00000419334 PPP1R2P1Q96PQ5 205 aa17.68■□□□□ 0.42
EPCAM-203ENST00000419334 SMIM14Q96QK8 99 aa17.68■□□□□ 0.42
EPCAM-203ENST00000419334 GORASP1Q9BQQ3 440 aa17.68■□□□□ 0.42
EPCAM-203ENST00000419334 MBNL1Q9NR56 388 aaKnown RBP17.68■□□□□ 0.42
EPCAM-203ENST00000419334 CABIN1Q9Y6J0 2220 aa17.68■□□□□ 0.42
EPCAM-203ENST00000419334 DMXL1Q9Y485 3027 aa17.67■□□□□ 0.42
EPCAM-203ENST00000419334 LOC285095A0A1B0GVY8 99 aa17.67■□□□□ 0.42
EPCAM-203ENST00000419334 F5H423 210 aaPredicted RBP17.67■□□□□ 0.42
EPCAM-203ENST00000419334 PSMB4P28070 264 aa17.67■□□□□ 0.42
EPCAM-203ENST00000419334 GEMP55040 296 aa17.67■□□□□ 0.42
EPCAM-203ENST00000419334 YPEL5P62699 121 aa17.67■□□□□ 0.42
EPCAM-203ENST00000419334 LONRF2Q1L5Z9 754 aa17.67■□□□□ 0.42
EPCAM-203ENST00000419334 CCDC70Q6NSX1 233 aa17.67■□□□□ 0.42
EPCAM-203ENST00000419334 DRICH1Q6PGQ1 229 aaPredicted RBP17.67■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms