RNA–Protein interactions for RNA: ENST00000373019.4

SF3A3-201, Transcript of splicing factor 3a subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3A3, Length 3,673 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-201ENST00000373019 LTB4R2Q9NPC1 389 aa9.59□□□□□ -0.87
SF3A3-201ENST00000373019 OXSMQ9NWU1 459 aa9.59□□□□□ -0.87
SF3A3-201ENST00000373019 GAKO14976 1311 aa9.59□□□□□ -0.87
SF3A3-201ENST00000373019 CCDC78A2IDD5 438 aa9.59□□□□□ -0.87
SF3A3-201ENST00000373019 PABPN1LA6NDY0 278 aaKnown RBP9.59□□□□□ -0.87
SF3A3-201ENST00000373019 CTDSP2O14595 271 aa9.59□□□□□ -0.87
SF3A3-201ENST00000373019 PIGNO95427 931 aa9.59□□□□□ -0.87
SF3A3-201ENST00000373019 CBLP22681 906 aa9.59□□□□□ -0.87
SF3A3-201ENST00000373019 TYK2P29597 1187 aa9.59□□□□□ -0.87
SF3A3-201ENST00000373019 SLC7A2P52569 658 aa9.59□□□□□ -0.87
SF3A3-201ENST00000373019 HK2P52789 917 aa9.59□□□□□ -0.87
SF3A3-201ENST00000373019 NDST1P52848 882 aa9.59□□□□□ -0.87
SF3A3-201ENST00000373019 ACTR2P61160 394 aa9.59□□□□□ -0.87
SF3A3-201ENST00000373019 SMAD1Q15797 465 aaKnown RBP9.59□□□□□ -0.87
SF3A3-201ENST00000373019 SAMD4BQ5PRF9 694 aaKnown RBP9.59□□□□□ -0.87
SF3A3-201ENST00000373019 UBQLNLQ8IYU4 475 aa9.59□□□□□ -0.87
SF3A3-201ENST00000373019 TMEM151AQ8N4L1 468 aa9.59□□□□□ -0.87
SF3A3-201ENST00000373019 URGCPQ8TCY9 931 aa9.59□□□□□ -0.87
SF3A3-201ENST00000373019 KCTD14Q9BQ13 255 aaPredicted RBP9.59□□□□□ -0.87
SF3A3-201ENST00000373019 ADNPQ9H2P0 1102 aa9.59□□□□□ -0.87
SF3A3-201ENST00000373019 RPRD1BQ9NQG5 326 aaKnown RBP9.59□□□□□ -0.87
SF3A3-201ENST00000373019 NECTIN3Q9NQS3 549 aa9.59□□□□□ -0.87
SF3A3-201ENST00000373019 C1orf112Q9NSG2 853 aa9.59□□□□□ -0.87
SF3A3-201ENST00000373019 PAK1IP1Q9NWT1 392 aaPredicted RBP9.59□□□□□ -0.87
SF3A3-201ENST00000373019 MAT2BQ9NZL9 334 aa9.59□□□□□ -0.87
SF3A3-201ENST00000373019 PAK5Q9P286 719 aa9.59□□□□□ -0.87
SF3A3-201ENST00000373019 ARHGAP28Q9P2N2 729 aa9.59□□□□□ -0.87
SF3A3-201ENST00000373019 TTC24A2A3L6 582 aaPredicted RBP9.58□□□□□ -0.88
SF3A3-201ENST00000373019 TCP10L2B9ZVM9 353 aa9.58□□□□□ -0.88
SF3A3-201ENST00000373019 TAL1P17542 331 aaPredicted RBP9.58□□□□□ -0.88
SF3A3-201ENST00000373019 FSHRP23945 695 aa9.58□□□□□ -0.88
SF3A3-201ENST00000373019 TBXAS1P24557 533 aaPredicted RBP9.58□□□□□ -0.88
SF3A3-201ENST00000373019 GTF2E2P29084 291 aaKnown RBP9.58□□□□□ -0.88
SF3A3-201ENST00000373019 MAGEA12P43365 314 aa9.58□□□□□ -0.88
SF3A3-201ENST00000373019 IRF9Q00978 393 aa9.58□□□□□ -0.88
SF3A3-201ENST00000373019 ZIK1Q3SY52 487 aaPredicted RBP9.58□□□□□ -0.88
SF3A3-201ENST00000373019 PYCR3Q53H96 274 aa9.58□□□□□ -0.88
SF3A3-201ENST00000373019 WDR78Q5VTH9 848 aa9.58□□□□□ -0.88
SF3A3-201ENST00000373019 MAP1SQ66K74 1059 aaPredicted RBP9.58□□□□□ -0.88
SF3A3-201ENST00000373019 DNAJC24Q6P3W2 148 aa9.58□□□□□ -0.88
SF3A3-201ENST00000373019 LAYNQ6UX15 382 aa9.58□□□□□ -0.88
SF3A3-201ENST00000373019 SAMD7Q7Z3H4 446 aa9.58□□□□□ -0.88
SF3A3-201ENST00000373019 ADCK1Q86TW2 530 aa9.58□□□□□ -0.88
SF3A3-201ENST00000373019 MCUQ8NE86 351 aa9.58□□□□□ -0.88
SF3A3-201ENST00000373019 STON2Q8WXE9 905 aa9.58□□□□□ -0.88
SF3A3-201ENST00000373019 RTP4Q96DX8 246 aa9.58□□□□□ -0.88
SF3A3-201ENST00000373019 ZNF300Q96RE9 604 aaPredicted RBP9.58□□□□□ -0.88
SF3A3-201ENST00000373019 SMOC2Q9H3U7 446 aa9.58□□□□□ -0.88
SF3A3-201ENST00000373019 SPC25Q9HBM1 224 aa9.58□□□□□ -0.88
SF3A3-201ENST00000373019 SNX15Q9NRS6 342 aa9.58□□□□□ -0.88
SF3A3-201ENST00000373019 PDZK1P1A8MUH7 402 aa9.58□□□□□ -0.88
SF3A3-201ENST00000373019 TMEM233B4DJY2 109 aa9.58□□□□□ -0.88
SF3A3-201ENST00000373019 SBK3P0C264 359 aa9.58□□□□□ -0.88
SF3A3-201ENST00000373019 MAPTP10636 758 aaKnown RBP9.58□□□□□ -0.88
SF3A3-201ENST00000373019 CFL1P23528 166 aaKnown RBP9.58□□□□□ -0.88
SF3A3-201ENST00000373019 DDOSTP39656 456 aa9.58□□□□□ -0.88
SF3A3-201ENST00000373019 ANO4Q32M45 955 aa9.58□□□□□ -0.88
SF3A3-201ENST00000373019 BRDTQ58F21 947 aaPredicted RBP9.58□□□□□ -0.88
SF3A3-201ENST00000373019 RBM48Q5RL73 367 aaKnown RBP9.58□□□□□ -0.88
SF3A3-201ENST00000373019 MFSD14BQ5SR56 506 aa9.58□□□□□ -0.88
SF3A3-201ENST00000373019 APOBEC3GQ9HC16 384 aaKnown RBP9.58□□□□□ -0.88
SF3A3-201ENST00000373019 EGFL7Q9UHF1 273 aa9.58□□□□□ -0.88
SF3A3-201ENST00000373019 CLRN2A0PK11 232 aa9.58□□□□□ -0.88
SF3A3-201ENST00000373019 AQP12BA6NM10 295 aa9.58□□□□□ -0.88
SF3A3-201ENST00000373019 KCNN4O15554 427 aa9.58□□□□□ -0.88
SF3A3-201ENST00000373019 EXTL3O43909 919 aa9.58□□□□□ -0.88
SF3A3-201ENST00000373019 METTL18O95568 372 aa9.58□□□□□ -0.88
SF3A3-201ENST00000373019 DBTP11182 482 aaKnown RBP9.58□□□□□ -0.88
SF3A3-201ENST00000373019 RFC2P35250 354 aa9.58□□□□□ -0.88
SF3A3-201ENST00000373019 GGT5P36269 586 aa9.58□□□□□ -0.88
SF3A3-201ENST00000373019 GJA9P57773 515 aa9.58□□□□□ -0.88
SF3A3-201ENST00000373019 NCS1P62166 190 aa9.58□□□□□ -0.88
SF3A3-201ENST00000373019 CRADDP78560 199 aa9.58□□□□□ -0.88
SF3A3-201ENST00000373019 IMPG1Q17R60 797 aa9.58□□□□□ -0.88
SF3A3-201ENST00000373019 STEAP4Q687X5 459 aa9.58□□□□□ -0.88
SF3A3-201ENST00000373019 ZNF544Q6NX49 715 aa9.58□□□□□ -0.88
SF3A3-201ENST00000373019 FAM122CQ6P4D5 195 aa9.58□□□□□ -0.88
SF3A3-201ENST00000373019 PADI6Q6TGC4 694 aa9.58□□□□□ -0.88
SF3A3-201ENST00000373019 CLEC14AQ86T13 490 aa9.58□□□□□ -0.88
SF3A3-201ENST00000373019 AQP12AQ8IXF9 295 aa9.58□□□□□ -0.88
SF3A3-201ENST00000373019 SVOPQ8N4V2 548 aa9.58□□□□□ -0.88
SF3A3-201ENST00000373019 WDTC1Q8N5D0 677 aa9.58□□□□□ -0.88
SF3A3-201ENST00000373019 ZNF784Q8NCA9 323 aaPredicted RBP9.58□□□□□ -0.88
SF3A3-201ENST00000373019 TRPV3Q8NET8 790 aa9.58□□□□□ -0.88
SF3A3-201ENST00000373019 ZNF606Q8WXB4 792 aa9.58□□□□□ -0.88
SF3A3-201ENST00000373019 GLMNQ92990 594 aa9.58□□□□□ -0.88
SF3A3-201ENST00000373019 SH3KBP1Q96B97 665 aa9.58□□□□□ -0.88
SF3A3-201ENST00000373019 OMA1Q96E52 524 aa9.58□□□□□ -0.88
SF3A3-201ENST00000373019 MFSD3Q96ES6 412 aa9.58□□□□□ -0.88
SF3A3-201ENST00000373019 CCDC120Q96HB5 630 aa9.58□□□□□ -0.88
SF3A3-201ENST00000373019 HSFY1Q96LI6 401 aa9.58□□□□□ -0.88
SF3A3-201ENST00000373019 HACL1Q9UJ83 578 aa9.58□□□□□ -0.88
SF3A3-201ENST00000373019 NAALAD2Q9Y3Q0 740 aa9.58□□□□□ -0.88
SF3A3-201ENST00000373019 SMCHD1A6NHR9 2005 aa9.57□□□□□ -0.88
SF3A3-201ENST00000373019 WDR27A2RRH5 827 aa9.57□□□□□ -0.88
SF3A3-201ENST00000373019 GLTPD2A6NH11 291 aa9.57□□□□□ -0.88
SF3A3-201ENST00000373019 NME4O00746 187 aa9.57□□□□□ -0.88
SF3A3-201ENST00000373019 F7P08709 466 aaPredicted RBP9.57□□□□□ -0.88
SF3A3-201ENST00000373019 SLC9A3P48764 834 aa9.57□□□□□ -0.88
SF3A3-201ENST00000373019 OR2B6P58173 313 aa9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms