RNA–Protein interactions for RNA: ENST00000372276.7

CD40-201, Transcript of CD40 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD40, Length 1,623 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD40-201ENST00000372276 TRAPPC9Q96Q05 1148 aa18.12■□□□□ 0.49
CD40-201ENST00000372276 NDNQ99608 321 aa18.12■□□□□ 0.49
CD40-201ENST00000372276 DDX50Q9BQ39 737 aaKnown RBP18.12■□□□□ 0.49
CD40-201ENST00000372276 SLC25A23Q9BV35 468 aa18.12■□□□□ 0.49
CD40-201ENST00000372276 PDFQ9HBH1 243 aa18.12■□□□□ 0.49
CD40-201ENST00000372276 CATSPERZQ9NTU4 200 aa18.12■□□□□ 0.49
CD40-201ENST00000372276 SRRDQ9UH36 339 aa18.12■□□□□ 0.49
CD40-201ENST00000372276 SUFUQ9UMX1 484 aa18.12■□□□□ 0.49
CD40-201ENST00000372276 TRAF6Q9Y4K3 522 aa18.12■□□□□ 0.49
CD40-201ENST00000372276 TTC3P53804 2025 aa18.12■□□□□ 0.49
CD40-201ENST00000372276 DPPA5A6NC42 116 aa18.11■□□□□ 0.49
CD40-201ENST00000372276 TRIM38O00635 465 aa18.11■□□□□ 0.49
CD40-201ENST00000372276 ENPP3O14638 875 aa18.11■□□□□ 0.49
CD40-201ENST00000372276 VPS4BO75351 444 aa18.11■□□□□ 0.49
CD40-201ENST00000372276 CLDN11O75508 207 aa18.11■□□□□ 0.49
CD40-201ENST00000372276 GNRH1P01148 92 aa18.11■□□□□ 0.49
CD40-201ENST00000372276 UQCRBP14927 111 aa18.11■□□□□ 0.49
CD40-201ENST00000372276 ATP6V0D1P61421 351 aa18.11■□□□□ 0.49
CD40-201ENST00000372276 HERVK_113P63132 956 aa18.11■□□□□ 0.49
CD40-201ENST00000372276 FLOT2Q14254 428 aa18.11■□□□□ 0.49
CD40-201ENST00000372276 TCHHL1Q5QJ38 904 aaPredicted RBP18.11■□□□□ 0.49
CD40-201ENST00000372276 RARS2Q5T160 578 aaKnown RBP18.11■□□□□ 0.49
CD40-201ENST00000372276 FUT10Q6P4F1 479 aa18.11■□□□□ 0.49
CD40-201ENST00000372276 ISCA2Q86U28 154 aa18.11■□□□□ 0.49
CD40-201ENST00000372276 KBTBD2Q8IY47 623 aa18.11■□□□□ 0.49
CD40-201ENST00000372276 PQLC1Q8N2U9 271 aa18.11■□□□□ 0.49
CD40-201ENST00000372276 PGBD5Q8N414 524 aa18.11■□□□□ 0.49
CD40-201ENST00000372276 ICA1LQ8NDH6 482 aa18.11■□□□□ 0.49
CD40-201ENST00000372276 OR4L1Q8NH43 312 aa18.11■□□□□ 0.49
CD40-201ENST00000372276 PLD4Q96BZ4 506 aa18.11■□□□□ 0.49
CD40-201ENST00000372276 SEPT5Q99719 369 aaPredicted RBP18.11■□□□□ 0.49
CD40-201ENST00000372276 MGME1Q9BQP7 344 aa18.11■□□□□ 0.49
CD40-201ENST00000372276 ERVK-6Q9BXR3 956 aa18.11■□□□□ 0.49
CD40-201ENST00000372276 PFDN4Q9NQP4 134 aa18.11■□□□□ 0.49
CD40-201ENST00000372276 STARD7Q9NQZ5 370 aa18.11■□□□□ 0.49
CD40-201ENST00000372276 DLGAP2Q9P1A6 1054 aa18.11■□□□□ 0.49
CD40-201ENST00000372276 HSFX1Q9UBD0 423 aa18.11■□□□□ 0.49
CD40-201ENST00000372276 SARDHQ9UL12 918 aa18.11■□□□□ 0.49
CD40-201ENST00000372276 SLC38A8A6NNN8 435 aa18.1■□□□□ 0.49
CD40-201ENST00000372276 ARVCFO00192 962 aa18.1■□□□□ 0.49
CD40-201ENST00000372276 ZMPSTE24O75844 475 aa18.1■□□□□ 0.49
CD40-201ENST00000372276 BCAS2O75934 225 aaPredicted RBP18.1■□□□□ 0.49
CD40-201ENST00000372276 PIM1P11309 404 aaPredicted RBP18.1■□□□□ 0.49
CD40-201ENST00000372276 CD9P21926 228 aa18.1■□□□□ 0.49
CD40-201ENST00000372276 PMLP29590 882 aa18.1■□□□□ 0.49
CD40-201ENST00000372276 HSPA13P48723 471 aa18.1■□□□□ 0.49
CD40-201ENST00000372276 GNA12Q03113 381 aa18.1■□□□□ 0.49
CD40-201ENST00000372276 TRAP1Q12931 704 aaKnown RBP18.1■□□□□ 0.49
CD40-201ENST00000372276 TYSND1Q2T9J0 566 aa18.1■□□□□ 0.49
CD40-201ENST00000372276 ZNF678Q5SXM1 525 aa18.1■□□□□ 0.49
CD40-201ENST00000372276 OGFRL1Q5TC84 451 aaPredicted RBP18.1■□□□□ 0.49
CD40-201ENST00000372276 CHST9Q7L1S5 443 aa18.1■□□□□ 0.49
CD40-201ENST00000372276 RNF135Q8IUD6 432 aa18.1■□□□□ 0.49
CD40-201ENST00000372276 SEPT8Q92599 483 aa18.1■□□□□ 0.49
CD40-201ENST00000372276 SGF29Q96ES7 293 aa18.1■□□□□ 0.49
CD40-201ENST00000372276 LRGUKQ96M69 825 aa18.1■□□□□ 0.49
CD40-201ENST00000372276 CASD1Q96PB1 797 aa18.1■□□□□ 0.49
CD40-201ENST00000372276 PSKH2Q96QS6 385 aa18.1■□□□□ 0.49
CD40-201ENST00000372276 VWA8A3KMH1 1905 aa18.1■□□□□ 0.49
CD40-201ENST00000372276 GREB1Q4ZG55 1949 aa18.1■□□□□ 0.49
CD40-201ENST00000372276 ILVBLA1L0T0 632 aa18.09■□□□□ 0.49
CD40-201ENST00000372276 TCAF2A6NFQ2 919 aa18.09■□□□□ 0.49
CD40-201ENST00000372276 BBIP1A8MTZ0 92 aa18.09■□□□□ 0.49
CD40-201ENST00000372276 PSMD12O00232 456 aaPredicted RBP18.09■□□□□ 0.49
CD40-201ENST00000372276 AURKAO14965 403 aa18.09■□□□□ 0.49
CD40-201ENST00000372276 KDELR3O43731 214 aa18.09■□□□□ 0.49
CD40-201ENST00000372276 TBX18O95935 607 aa18.09■□□□□ 0.49
CD40-201ENST00000372276 GOT2P00505 430 aaKnown RBP18.09■□□□□ 0.49
CD40-201ENST00000372276 HSPA8P11142 646 aaKnown RBP18.09■□□□□ 0.49
CD40-201ENST00000372276 ELNP15502 786 aa18.09■□□□□ 0.49
CD40-201ENST00000372276 CCR10P46092 362 aa18.09■□□□□ 0.49
CD40-201ENST00000372276 STX1BP61266 288 aa18.09■□□□□ 0.49
CD40-201ENST00000372276 TRIP10Q15642 601 aa18.09■□□□□ 0.49
CD40-201ENST00000372276 AFTPHQ6ULP2 937 aa18.09■□□□□ 0.49
CD40-201ENST00000372276 EFL1Q7Z2Z2 1120 aaKnown RBP18.09■□□□□ 0.49
CD40-201ENST00000372276 HOMEZQ8IX15 550 aa18.09■□□□□ 0.49
CD40-201ENST00000372276 LGI2Q8N0V4 545 aa18.09■□□□□ 0.49
CD40-201ENST00000372276 SPATA6LQ8N4H0 392 aa18.09■□□□□ 0.49
CD40-201ENST00000372276 ADCY4Q8NFM4 1077 aa18.09■□□□□ 0.49
CD40-201ENST00000372276 TBATAQ96M53 351 aa18.09■□□□□ 0.49
CD40-201ENST00000372276 CYP2S1Q96SQ9 504 aa18.09■□□□□ 0.49
CD40-201ENST00000372276 TTPALQ9BTX7 342 aa18.09■□□□□ 0.49
CD40-201ENST00000372276 CINPQ9BW66 212 aaPredicted RBP18.09■□□□□ 0.49
CD40-201ENST00000372276 GPR62Q9BZJ7 368 aa18.09■□□□□ 0.49
CD40-201ENST00000372276 UNC93B1Q9H1C4 597 aa18.09■□□□□ 0.49
CD40-201ENST00000372276 CCDC68Q9H2F9 335 aa18.09■□□□□ 0.49
CD40-201ENST00000372276 GSTO2Q9H4Y5 243 aa18.09■□□□□ 0.49
CD40-201ENST00000372276 NLE1Q9NVX2 485 aaPredicted RBP18.09■□□□□ 0.49
CD40-201ENST00000372276 SUCOQ9UBS9 1254 aaKnown RBP18.09■□□□□ 0.49
CD40-201ENST00000372276 UBA2Q9UBT2 640 aaPredicted RBP18.09■□□□□ 0.49
CD40-201ENST00000372276 C2orf81A6NN90 581 aa18.09■□□□□ 0.49
CD40-201ENST00000372276 SYCE1LA8MT33 242 aa18.09■□□□□ 0.49
CD40-201ENST00000372276 H3BNX3 289 aa18.09■□□□□ 0.49
CD40-201ENST00000372276 STAMBPO95630 424 aa18.09■□□□□ 0.49
CD40-201ENST00000372276 SNRPB2P08579 225 aaKnown RBP18.09■□□□□ 0.49
CD40-201ENST00000372276 ENO3P13929 434 aaPredicted RBP18.09■□□□□ 0.49
CD40-201ENST00000372276 HNRNPLP14866 589 aaKnown RBP eCLIP18.09■□□□□ 0.492e-6■■□□□ 12
CD40-201ENST00000372276 CD1DP15813 335 aa18.09■□□□□ 0.49
CD40-201ENST00000372276 STC1P52823 247 aa18.09■□□□□ 0.49
CD40-201ENST00000372276 OXCT1P55809 520 aa18.09■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms