RNA–Protein interactions for RNA: ENST00000233114.12

MDH1-201, Transcript of malate dehydrogenase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MDH1, Length 1,650 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDH1-201ENST00000233114 RAMP2O60895 175 aa9.9□□□□□ -0.82
MDH1-201ENST00000233114 SMIM24O75264 130 aa9.9□□□□□ -0.82
MDH1-201ENST00000233114 SKAP2O75563 359 aaPredicted RBP9.9□□□□□ -0.82
MDH1-201ENST00000233114 S1PR4O95977 384 aa9.9□□□□□ -0.82
MDH1-201ENST00000233114 ATXN1LP0C7T5 689 aaKnown RBP9.9□□□□□ -0.82
MDH1-201ENST00000233114 CCDC166P0CW27 439 aa9.9□□□□□ -0.82
MDH1-201ENST00000233114 VCLP18206 1134 aa9.9□□□□□ -0.82
MDH1-201ENST00000233114 YWHAQP27348 245 aa9.9□□□□□ -0.82
MDH1-201ENST00000233114 CCR10P46092 362 aa9.9□□□□□ -0.82
MDH1-201ENST00000233114 PGFP49763 221 aa9.9□□□□□ -0.82
MDH1-201ENST00000233114 USP46P62068 366 aa9.9□□□□□ -0.82
MDH1-201ENST00000233114 PRAMEP78395 509 aa9.9□□□□□ -0.82
MDH1-201ENST00000233114 TRAP1Q12931 704 aaKnown RBP9.9□□□□□ -0.82
MDH1-201ENST00000233114 SERINC3Q13530 473 aa9.9□□□□□ -0.82
MDH1-201ENST00000233114 PTK2BQ14289 1009 aa9.9□□□□□ -0.82
MDH1-201ENST00000233114 PCSK7Q16549 785 aa9.9□□□□□ -0.82
MDH1-201ENST00000233114 MMEL1Q495T6 779 aa9.9□□□□□ -0.82
MDH1-201ENST00000233114 MRNIPQ6NTE8 343 aa9.9□□□□□ -0.82
MDH1-201ENST00000233114 CUZD1Q86UP6 607 aa9.9□□□□□ -0.82
MDH1-201ENST00000233114 CACTIN-AS1Q8N1I8 211 aa9.9□□□□□ -0.82
MDH1-201ENST00000233114 BBS5Q8N3I7 341 aa9.9□□□□□ -0.82
MDH1-201ENST00000233114 MARVELD2Q8N4S9 558 aa9.9□□□□□ -0.82
MDH1-201ENST00000233114 SHKBP1Q8TBC3 707 aa9.9□□□□□ -0.82
MDH1-201ENST00000233114 ARRDC2Q8TBH0 407 aa9.9□□□□□ -0.82
MDH1-201ENST00000233114 SPPL2BQ8TCT7 592 aa9.9□□□□□ -0.82
MDH1-201ENST00000233114 ASB9Q96DX5 294 aa9.9□□□□□ -0.82
MDH1-201ENST00000233114 DUS3LQ96G46 650 aaKnown RBP9.9□□□□□ -0.82
MDH1-201ENST00000233114 LRGUKQ96M69 825 aa9.9□□□□□ -0.82
MDH1-201ENST00000233114 CYP2S1Q96SQ9 504 aa9.9□□□□□ -0.82
MDH1-201ENST00000233114 CDK5RAP1Q96SZ6 601 aaKnown RBP9.9□□□□□ -0.82
MDH1-201ENST00000233114 YIPF3Q9GZM5 350 aa9.9□□□□□ -0.82
MDH1-201ENST00000233114 POLR1EQ9GZS1 481 aaKnown RBP9.9□□□□□ -0.82
MDH1-201ENST00000233114 UNC93B1Q9H1C4 597 aa9.9□□□□□ -0.82
MDH1-201ENST00000233114 EPB41L1Q9H4G0 881 aa9.9□□□□□ -0.82
MDH1-201ENST00000233114 GMIPQ9P107 970 aa9.9□□□□□ -0.82
MDH1-201ENST00000233114 NOD1Q9Y239 953 aa9.9□□□□□ -0.82
MDH1-201ENST00000233114 ACOT8O14734 319 aa9.9□□□□□ -0.83
MDH1-201ENST00000233114 UBDO15205 165 aa9.9□□□□□ -0.83
MDH1-201ENST00000233114 CA12O43570 354 aa9.9□□□□□ -0.83
MDH1-201ENST00000233114 PRAMEF11O60813 436 aa9.9□□□□□ -0.83
MDH1-201ENST00000233114 C8BP07358 591 aa9.9□□□□□ -0.83
MDH1-201ENST00000233114 UBTFL6P0CB48 400 aaPredicted RBP9.9□□□□□ -0.83
MDH1-201ENST00000233114 ENO3P13929 434 aaPredicted RBP9.9□□□□□ -0.83
MDH1-201ENST00000233114 XRCC1P18887 633 aaPredicted RBP9.9□□□□□ -0.83
MDH1-201ENST00000233114 FDXRP22570 491 aa9.9□□□□□ -0.83
MDH1-201ENST00000233114 PSMA3P25788 255 aa9.9□□□□□ -0.83
MDH1-201ENST00000233114 CHN2P52757 468 aa9.9□□□□□ -0.83
MDH1-201ENST00000233114 AQP4P55087 323 aa9.9□□□□□ -0.83
MDH1-201ENST00000233114 DSC2Q02487 901 aa9.9□□□□□ -0.83
MDH1-201ENST00000233114 ITKQ08881 620 aa9.9□□□□□ -0.83
MDH1-201ENST00000233114 SLC10A7Q0GE19 358 aa9.9□□□□□ -0.83
MDH1-201ENST00000233114 CRHR2Q13324 411 aa9.9□□□□□ -0.83
MDH1-201ENST00000233114 CEACAM7Q14002 265 aa9.9□□□□□ -0.83
MDH1-201ENST00000233114 MRPL58Q14197 206 aaKnown RBP9.9□□□□□ -0.83
MDH1-201ENST00000233114 POLD3Q15054 466 aaPredicted RBP9.9□□□□□ -0.83
MDH1-201ENST00000233114 GRAMD1BQ3KR37 738 aa9.9□□□□□ -0.83
MDH1-201ENST00000233114 SPATS1Q496A3 300 aa9.9□□□□□ -0.83
MDH1-201ENST00000233114 C5orf22Q49AR2 442 aa9.9□□□□□ -0.83
MDH1-201ENST00000233114 SIRPB2Q5JXA9 342 aa9.9□□□□□ -0.83
MDH1-201ENST00000233114 LPCAT4Q643R3 524 aa9.9□□□□□ -0.83
MDH1-201ENST00000233114 TMEM198Q66K66 360 aa9.9□□□□□ -0.83
MDH1-201ENST00000233114 ZNF280DQ6N043 979 aa9.9□□□□□ -0.83
MDH1-201ENST00000233114 BLOC1S3Q6QNY0 202 aa9.9□□□□□ -0.83
MDH1-201ENST00000233114 RAB44Q7Z6P3 723 aaPredicted RBP9.9□□□□□ -0.83
MDH1-201ENST00000233114 TICAM1Q8IUC6 712 aa9.9□□□□□ -0.83
MDH1-201ENST00000233114 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP9.9□□□□□ -0.83
MDH1-201ENST00000233114 RHEBL1Q8TAI7 183 aa9.9□□□□□ -0.83
MDH1-201ENST00000233114 C2orf15Q8WU43 125 aaKnown RBP9.9□□□□□ -0.83
MDH1-201ENST00000233114 FBXO32Q969P5 355 aa9.9□□□□□ -0.83
MDH1-201ENST00000233114 PABPC5Q96DU9 382 aaKnown RBP9.9□□□□□ -0.83
MDH1-201ENST00000233114 DCUN1D1Q96GG9 259 aa9.9□□□□□ -0.83
MDH1-201ENST00000233114 TUBGCP5Q96RT8 1024 aa9.9□□□□□ -0.83
MDH1-201ENST00000233114 ATXN3LQ9H3M9 355 aa9.9□□□□□ -0.83
MDH1-201ENST00000233114 GSTO2Q9H4Y5 243 aa9.9□□□□□ -0.83
MDH1-201ENST00000233114 INTS10Q9NVR2 710 aaKnown RBP9.9□□□□□ -0.83
MDH1-201ENST00000233114 MTPAPQ9NVV4 582 aaKnown RBP eCLIP9.9□□□□□ -0.83
MDH1-201ENST00000233114 PLK2Q9NYY3 685 aa9.9□□□□□ -0.83
MDH1-201ENST00000233114 MARCH2Q9P0N8 246 aa9.9□□□□□ -0.83
MDH1-201ENST00000233114 RIMS3Q9UJD0 308 aa9.9□□□□□ -0.83
MDH1-201ENST00000233114 EIF4E1BA6NMX2 242 aaKnown RBP9.89□□□□□ -0.83
MDH1-201ENST00000233114 J3KR12 359 aa9.89□□□□□ -0.83
MDH1-201ENST00000233114 PSMD12O00232 456 aaPredicted RBP9.89□□□□□ -0.83
MDH1-201ENST00000233114 LDB2O43679 373 aa9.89□□□□□ -0.83
MDH1-201ENST00000233114 RNASEH1O60930 286 aaKnown RBP9.89□□□□□ -0.83
MDH1-201ENST00000233114 VPS4BO75351 444 aa9.89□□□□□ -0.83
MDH1-201ENST00000233114 RPP40O75818 363 aaKnown RBP9.89□□□□□ -0.83
MDH1-201ENST00000233114 SORBS2O94875 1100 aaKnown RBP9.89□□□□□ -0.83
MDH1-201ENST00000233114 GLP2RO95838 553 aa9.89□□□□□ -0.83
MDH1-201ENST00000233114 JUNP05412 331 aaKnown RBP9.89□□□□□ -0.83
MDH1-201ENST00000233114 FGF4P08620 206 aa9.89□□□□□ -0.83
MDH1-201ENST00000233114 HAPLN1P10915 354 aaPredicted RBP9.89□□□□□ -0.83
MDH1-201ENST00000233114 CTGFP29279 349 aa9.89□□□□□ -0.83
MDH1-201ENST00000233114 CCNHP51946 323 aaPredicted RBP9.89□□□□□ -0.83
MDH1-201ENST00000233114 PSME3P61289 254 aa9.89□□□□□ -0.83
MDH1-201ENST00000233114 HERVK_113P63132 956 aa9.89□□□□□ -0.83
MDH1-201ENST00000233114 FASTKQ14296 549 aaKnown RBP9.89□□□□□ -0.83
MDH1-201ENST00000233114 PDK3Q15120 406 aa9.89□□□□□ -0.83
MDH1-201ENST00000233114 ALFQ53S48 1182 aa9.89□□□□□ -0.83
MDH1-201ENST00000233114 CLLU1OSQ5K130 101 aa9.89□□□□□ -0.83
MDH1-201ENST00000233114 ZNF678Q5SXM1 525 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 76.5 ms