RNA–Protein interactions for RNA: ENST00000639004.1

FAM49B-230, Transcript of family with sequence similarity 49 member B, humanhuman

TSL 5 BASIC

Gene FAM49B, Length 837 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM49B-230ENST00000639004 CSTF3Q12996 717 aaKnown RBP6.32□□□□□ -1.4
FAM49B-230ENST00000639004 OLIG2Q13516 323 aa6.32□□□□□ -1.4
FAM49B-230ENST00000639004 HNF4GQ14541 408 aa6.32□□□□□ -1.4
FAM49B-230ENST00000639004 FAM205BPQ63HN1 556 aa6.32□□□□□ -1.4
FAM49B-230ENST00000639004 HIST2H2BCQ6DN03 193 aa6.32□□□□□ -1.4
FAM49B-230ENST00000639004 HIST2H2BDQ6DRA6 164 aa6.32□□□□□ -1.4
FAM49B-230ENST00000639004 QSOX2Q6ZRP7 698 aa6.32□□□□□ -1.4
FAM49B-230ENST00000639004 IKBIPQ70UQ0 350 aa6.32□□□□□ -1.4
FAM49B-230ENST00000639004 CCDC105Q8IYK2 499 aa6.32□□□□□ -1.4
FAM49B-230ENST00000639004 ARRDC2Q8TBH0 407 aa6.32□□□□□ -1.4
FAM49B-230ENST00000639004 ERGIC1Q969X5 290 aa6.32□□□□□ -1.4
FAM49B-230ENST00000639004 FAM234AQ9H0X4 552 aa6.32□□□□□ -1.4
FAM49B-230ENST00000639004 EIF2B3Q9NR50 452 aaKnown RBP6.32□□□□□ -1.4
FAM49B-230ENST00000639004 SEPT11Q9NVA2 429 aaKnown RBP6.32□□□□□ -1.4
FAM49B-230ENST00000639004 TMEM51Q9NW97 253 aa6.32□□□□□ -1.4
FAM49B-230ENST00000639004 CISD1Q9NZ45 108 aaKnown RBP6.32□□□□□ -1.4
FAM49B-230ENST00000639004 FBXO9Q9UK97 447 aaPredicted RBP6.32□□□□□ -1.4
FAM49B-230ENST00000639004 HMGB1P1B2RPK0 211 aaPredicted RBP6.31□□□□□ -1.4
FAM49B-230ENST00000639004 H3BNX3 289 aa6.31□□□□□ -1.4
FAM49B-230ENST00000639004 RGS14O43566 566 aa6.31□□□□□ -1.4
FAM49B-230ENST00000639004 SPRY3O43610 288 aa6.31□□□□□ -1.4
FAM49B-230ENST00000639004 MTA2O94776 668 aa6.31□□□□□ -1.4
FAM49B-230ENST00000639004 SOX30O94993 753 aa6.31□□□□□ -1.4
FAM49B-230ENST00000639004 CDH2P19022 906 aaPredicted RBP6.31□□□□□ -1.4
FAM49B-230ENST00000639004 CHATP28329 748 aa6.31□□□□□ -1.4
FAM49B-230ENST00000639004 TM4SF1P30408 202 aa6.31□□□□□ -1.4
FAM49B-230ENST00000639004 F2RL1P55085 397 aa6.31□□□□□ -1.4
FAM49B-230ENST00000639004 NAP1L1P55209 391 aaKnown RBP6.31□□□□□ -1.4
FAM49B-230ENST00000639004 CTTNQ14247 550 aaKnown RBP6.31□□□□□ -1.4
FAM49B-230ENST00000639004 SHBQ15464 509 aa6.31□□□□□ -1.4
FAM49B-230ENST00000639004 CXorf66Q5JRM2 361 aaPredicted RBP6.31□□□□□ -1.4
FAM49B-230ENST00000639004 OTUD1Q5VV17 481 aaPredicted RBP6.31□□□□□ -1.4
FAM49B-230ENST00000639004 GSTA5Q7RTV2 222 aa6.31□□□□□ -1.4
FAM49B-230ENST00000639004 ZBTB2Q8N680 514 aa6.31□□□□□ -1.4
FAM49B-230ENST00000639004 MIGA1Q8NAN2 632 aa6.31□□□□□ -1.4
FAM49B-230ENST00000639004 BEST2Q8NFU1 509 aa6.31□□□□□ -1.4
FAM49B-230ENST00000639004 HUS1BQ8NHY5 278 aa6.31□□□□□ -1.4
FAM49B-230ENST00000639004 TIGD1Q96MW7 591 aa6.31□□□□□ -1.4
FAM49B-230ENST00000639004 SLITRK1Q96PX8 696 aa6.31□□□□□ -1.4
FAM49B-230ENST00000639004 HCFC1R1Q9NWW0 138 aa6.31□□□□□ -1.4
FAM49B-230ENST00000639004 DLGAP2Q9P1A6 1054 aa6.31□□□□□ -1.4
FAM49B-230ENST00000639004 INSL5Q9Y5Q6 135 aa6.31□□□□□ -1.4
FAM49B-230ENST00000639004 LYVE1Q9Y5Y7 322 aa6.31□□□□□ -1.4
FAM49B-230ENST00000639004 SQORQ9Y6N5 450 aa6.31□□□□□ -1.4
FAM49B-230ENST00000639004 ITM2AO43736 263 aa6.3□□□□□ -1.4
FAM49B-230ENST00000639004 NDUFB4O95168 129 aa6.3□□□□□ -1.4
FAM49B-230ENST00000639004 KRT10P13645 584 aa6.3□□□□□ -1.4
FAM49B-230ENST00000639004 NAGAP17050 411 aa6.3□□□□□ -1.4
FAM49B-230ENST00000639004 GPS2Q13227 327 aa6.3□□□□□ -1.4
FAM49B-230ENST00000639004 DRAP1Q14919 205 aaPredicted RBP6.3□□□□□ -1.4
FAM49B-230ENST00000639004 MEA1Q16626 185 aa6.3□□□□□ -1.4
FAM49B-230ENST00000639004 DNTTIP2Q5QJE6 756 aaKnown RBP6.3□□□□□ -1.4
FAM49B-230ENST00000639004 FNBP1LQ5T0N5 605 aa6.3□□□□□ -1.4
FAM49B-230ENST00000639004 FASTKD5Q7L8L6 764 aaKnown RBP6.3□□□□□ -1.4
FAM49B-230ENST00000639004 LINGO2Q7L985 606 aa6.3□□□□□ -1.4
FAM49B-230ENST00000639004 TECPR1Q7Z6L1 1165 aa6.3□□□□□ -1.4
FAM49B-230ENST00000639004 ARHGAP12Q8IWW6 846 aa6.3□□□□□ -1.4
FAM49B-230ENST00000639004 SMG7Q92540 1137 aaKnown RBP6.3□□□□□ -1.4
FAM49B-230ENST00000639004 SDF4Q9BRK5 362 aa6.3□□□□□ -1.4
FAM49B-230ENST00000639004 RBM38Q9H0Z9 239 aaKnown RBP6.3□□□□□ -1.4
FAM49B-230ENST00000639004 GHITMQ9H3K2 345 aa6.3□□□□□ -1.4
FAM49B-230ENST00000639004 IL36RNQ9UBH0 155 aa6.3□□□□□ -1.4
FAM49B-230ENST00000639004 FBXO2Q9UK22 296 aaPredicted RBP6.3□□□□□ -1.4
FAM49B-230ENST00000639004 CACNA1IQ9P0X4 2223 aa6.29□□□□□ -1.4
FAM49B-230ENST00000639004 A0A1B0GVT2 93 aa6.29□□□□□ -1.4
FAM49B-230ENST00000639004 INAFM1C9JVW0 142 aa6.29□□□□□ -1.4
FAM49B-230ENST00000639004 J3KR12 359 aa6.29□□□□□ -1.4
FAM49B-230ENST00000639004 GTPBP1O00178 669 aaKnown RBP6.29□□□□□ -1.4
FAM49B-230ENST00000639004 VWA5AO00534 786 aa6.29□□□□□ -1.4
FAM49B-230ENST00000639004 GFPT2O94808 682 aa6.29□□□□□ -1.4
FAM49B-230ENST00000639004 RARGP13631 454 aa6.29□□□□□ -1.4
FAM49B-230ENST00000639004 IL7RP16871 459 aa6.29□□□□□ -1.4
FAM49B-230ENST00000639004 BDNFP23560 247 aa6.29□□□□□ -1.4
FAM49B-230ENST00000639004 PIGAP37287 484 aa6.29□□□□□ -1.4
FAM49B-230ENST00000639004 ROR2Q01974 943 aaKnown RBP6.29□□□□□ -1.4
FAM49B-230ENST00000639004 NIPAL4Q0D2K0 466 aa6.29□□□□□ -1.4
FAM49B-230ENST00000639004 C2orf68Q2NKX9 166 aa6.29□□□□□ -1.4
FAM49B-230ENST00000639004 FSCBQ5H9T9 825 aa6.29□□□□□ -1.4
FAM49B-230ENST00000639004 SPATA1Q5VX52 437 aa6.29□□□□□ -1.4
FAM49B-230ENST00000639004 CFAP161Q6P656 301 aa6.29□□□□□ -1.4
FAM49B-230ENST00000639004 HAPLN4Q86UW8 402 aa6.29□□□□□ -1.4
FAM49B-230ENST00000639004 WDTC1Q8N5D0 677 aa6.29□□□□□ -1.4
FAM49B-230ENST00000639004 TRIB2Q92519 343 aa6.29□□□□□ -1.4
FAM49B-230ENST00000639004 SLC41A2Q96JW4 573 aa6.29□□□□□ -1.4
FAM49B-230ENST00000639004 ZNF570Q96NI8 536 aa6.29□□□□□ -1.4
FAM49B-230ENST00000639004 C1QTNF5Q9BXJ0 243 aa6.29□□□□□ -1.4
FAM49B-230ENST00000639004 OR6C3Q9NZP0 311 aa6.29□□□□□ -1.4
FAM49B-230ENST00000639004 CNOT8Q9UFF9 292 aaKnown RBP6.29□□□□□ -1.4
FAM49B-230ENST00000639004 CEPT1Q9Y6K0 416 aa6.29□□□□□ -1.4
FAM49B-230ENST00000639004 FAM237AA0A1B0GTK4 181 aa6.28□□□□□ -1.4
FAM49B-230ENST00000639004 AP3D1O14617 1153 aa6.28□□□□□ -1.4
FAM49B-230ENST00000639004 HNRNPCL1O60812 293 aaKnown RBP6.28□□□□□ -1.4
FAM49B-230ENST00000639004 IPO7O95373 1038 aaKnown RBP6.28□□□□□ -1.4
FAM49B-230ENST00000639004 PPARGP37231 505 aaPredicted RBP6.28□□□□□ -1.4
FAM49B-230ENST00000639004 HADHAP40939 763 aa6.28□□□□□ -1.4
FAM49B-230ENST00000639004 COMPP49747 757 aaPredicted RBP6.28□□□□□ -1.4
FAM49B-230ENST00000639004 CLNS1AP54105 237 aaKnown RBP6.28□□□□□ -1.4
FAM49B-230ENST00000639004 SORDQ00796 357 aa6.28□□□□□ -1.4
FAM49B-230ENST00000639004 NAE1Q13564 534 aa6.28□□□□□ -1.4
FAM49B-230ENST00000639004 MMEL1Q495T6 779 aa6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 69.6 ms