RNA–Protein interactions for RNA: ENST00000580540.1

SREBF1-219, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 4

Gene SREBF1, Length 540 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-219ENST00000580540 CCNB1P14635 433 aa16.7■□□□□ 0.26
SREBF1-219ENST00000580540 NME1P15531 152 aaKnown RBP16.7■□□□□ 0.26
SREBF1-219ENST00000580540 CKMT2P17540 419 aa16.7■□□□□ 0.26
SREBF1-219ENST00000580540 CTPS1P17812 591 aa16.7■□□□□ 0.26
SREBF1-219ENST00000580540 NFKBIAP25963 317 aa16.7■□□□□ 0.26
SREBF1-219ENST00000580540 DSC2Q02487 901 aa16.7■□□□□ 0.26
SREBF1-219ENST00000580540 ZNF211Q13398 564 aaPredicted RBP16.7■□□□□ 0.26
SREBF1-219ENST00000580540 INPP5AQ14642 412 aa16.7■□□□□ 0.26
SREBF1-219ENST00000580540 TCEAL1Q15170 157 aa16.7■□□□□ 0.26
SREBF1-219ENST00000580540 LLGL1Q15334 1064 aa16.7■□□□□ 0.26
SREBF1-219ENST00000580540 ST3GAL2Q16842 350 aa16.7■□□□□ 0.26
SREBF1-219ENST00000580540 RALGPS1Q5JS13 557 aa16.7■□□□□ 0.26
SREBF1-219ENST00000580540 LRRC38Q5VT99 294 aa16.7■□□□□ 0.26
SREBF1-219ENST00000580540 RD3Q7Z3Z2 195 aa16.7■□□□□ 0.26
SREBF1-219ENST00000580540 TMTC1Q8IUR5 882 aa16.7■□□□□ 0.26
SREBF1-219ENST00000580540 RBFAQ8N0V3 343 aa16.7■□□□□ 0.26
SREBF1-219ENST00000580540 ZNF548Q8NEK5 533 aaPredicted RBP16.7■□□□□ 0.26
SREBF1-219ENST00000580540 OR4C6Q8NH72 309 aa16.7■□□□□ 0.26
SREBF1-219ENST00000580540 MAML1Q92585 1016 aa16.7■□□□□ 0.26
SREBF1-219ENST00000580540 TSGA13Q96PP4 275 aa16.7■□□□□ 0.26
SREBF1-219ENST00000580540 LGMNQ99538 433 aa16.7■□□□□ 0.26
SREBF1-219ENST00000580540 TCEAL2Q9H3H9 227 aaPredicted RBP16.7■□□□□ 0.26
SREBF1-219ENST00000580540 HAUS2Q9NVX0 235 aa16.7■□□□□ 0.26
SREBF1-219ENST00000580540 PHTF1Q9UMS5 762 aa16.7■□□□□ 0.26
SREBF1-219ENST00000580540 OR1A2Q9Y585 309 aa16.7■□□□□ 0.26
SREBF1-219ENST00000580540 ALG6Q9Y672 507 aa16.7■□□□□ 0.26
SREBF1-219ENST00000580540 ARID1BQ8NFD5 2236 aaPredicted RBP16.7■□□□□ 0.26
SREBF1-219ENST00000580540 LRRK1Q38SD2 2015 aa16.7■□□□□ 0.26
SREBF1-219ENST00000580540 CFAP69A5D8W1 941 aa16.69■□□□□ 0.26
SREBF1-219ENST00000580540 FAM149AA5PLN7 773 aa16.69■□□□□ 0.26
SREBF1-219ENST00000580540 C3orf70A6NLC5 250 aaPredicted RBP16.69■□□□□ 0.26
SREBF1-219ENST00000580540 SCAMP1O15126 338 aa16.69■□□□□ 0.26
SREBF1-219ENST00000580540 DKK1O94907 266 aa16.69■□□□□ 0.26
SREBF1-219ENST00000580540 PGLSO95336 258 aa16.69■□□□□ 0.26
SREBF1-219ENST00000580540 LCA5LO95447 670 aa16.69■□□□□ 0.26
SREBF1-219ENST00000580540 JCHAINP01591 159 aa16.69■□□□□ 0.26
SREBF1-219ENST00000580540 PROS1P07225 676 aa16.69■□□□□ 0.26
SREBF1-219ENST00000580540 CYP2A6P11509 494 aaPredicted RBP16.69■□□□□ 0.26
SREBF1-219ENST00000580540 MYF5P13349 255 aa16.69■□□□□ 0.26
SREBF1-219ENST00000580540 VIPR1P32241 457 aa16.69■□□□□ 0.26
SREBF1-219ENST00000580540 ACADVLP49748 655 aa16.69■□□□□ 0.26
SREBF1-219ENST00000580540 NAP1L1P55209 391 aaKnown RBP16.69■□□□□ 0.26
SREBF1-219ENST00000580540 AP1B1Q10567 949 aa16.69■□□□□ 0.26
SREBF1-219ENST00000580540 C1orf61Q13536 156 aa16.69■□□□□ 0.26
SREBF1-219ENST00000580540 TCEA2Q15560 299 aa16.69■□□□□ 0.26
SREBF1-219ENST00000580540 PRRT3Q5FWE3 981 aa16.69■□□□□ 0.26
SREBF1-219ENST00000580540 ENPP7Q6UWV6 458 aa16.69■□□□□ 0.26
SREBF1-219ENST00000580540 MFSD7Q6UXD7 560 aa16.69■□□□□ 0.26
SREBF1-219ENST00000580540 NPNTQ6UXI9 565 aa16.69■□□□□ 0.26
SREBF1-219ENST00000580540 TMPRSS7Q7RTY8 843 aa16.69■□□□□ 0.26
SREBF1-219ENST00000580540 HID1Q8IV36 788 aa16.69■□□□□ 0.26
SREBF1-219ENST00000580540 PHACTR4Q8IZ21 702 aa16.69■□□□□ 0.26
SREBF1-219ENST00000580540 PLD5Q8N7P1 536 aa16.69■□□□□ 0.26
SREBF1-219ENST00000580540 GATA6Q92908 595 aa16.69■□□□□ 0.26
SREBF1-219ENST00000580540 APOOQ9BUR5 198 aa16.69■□□□□ 0.26
SREBF1-219ENST00000580540 SLC13A1Q9BZW2 595 aa16.69■□□□□ 0.26
SREBF1-219ENST00000580540 SEPT10Q9P0V9 454 aa16.69■□□□□ 0.26
SREBF1-219ENST00000580540 SPASTQ9UBP0 616 aa16.69■□□□□ 0.26
SREBF1-219ENST00000580540 APOBEC3BQ9UH17 382 aaKnown RBP16.69■□□□□ 0.26
SREBF1-219ENST00000580540 GOLGA4Q13439 2230 aaKnown RBP16.68■□□□□ 0.26
SREBF1-219ENST00000580540 MAP1BP46821 2468 aaKnown RBP16.68■□□□□ 0.26
SREBF1-219ENST00000580540 K7ESM1 405 aa16.68■□□□□ 0.26
SREBF1-219ENST00000580540 KCNK1O00180 336 aa16.68■□□□□ 0.26
SREBF1-219ENST00000580540 TOR1BO14657 336 aa16.68■□□□□ 0.26
SREBF1-219ENST00000580540 AQP9O43315 295 aa16.68■□□□□ 0.26
SREBF1-219ENST00000580540 NDUFA10O95299 355 aa16.68■□□□□ 0.26
SREBF1-219ENST00000580540 HLA-DQB2P05538 268 aa16.68■□□□□ 0.26
SREBF1-219ENST00000580540 ZFXP17010 805 aaPredicted RBP16.68■□□□□ 0.26
SREBF1-219ENST00000580540 HTR1BP28222 390 aa16.68■□□□□ 0.26
SREBF1-219ENST00000580540 EPHB1P54762 984 aa16.68■□□□□ 0.26
SREBF1-219ENST00000580540 CLDN6P56747 220 aa16.68■□□□□ 0.26
SREBF1-219ENST00000580540 PPARDQ03181 441 aa16.68■□□□□ 0.26
SREBF1-219ENST00000580540 ARHGEF7Q14155 803 aa16.68■□□□□ 0.26
SREBF1-219ENST00000580540 PTPRRQ15256 657 aa16.68■□□□□ 0.26
SREBF1-219ENST00000580540 DEFB133Q30KQ1 61 aa16.68■□□□□ 0.26
SREBF1-219ENST00000580540 PROX2Q3B8N5 592 aa16.68■□□□□ 0.26
SREBF1-219ENST00000580540 FAM182AQ5T1J6 154 aa16.68■□□□□ 0.26
SREBF1-219ENST00000580540 KAZNQ674X7 775 aa16.68■□□□□ 0.26
SREBF1-219ENST00000580540 SLC9A4Q6AI14 798 aa16.68■□□□□ 0.26
SREBF1-219ENST00000580540 CCNI2Q6ZMN8 369 aaPredicted RBP16.68■□□□□ 0.26
SREBF1-219ENST00000580540 MACC1Q6ZN28 852 aa16.68■□□□□ 0.26
SREBF1-219ENST00000580540 B4GALNT4Q76KP1 1039 aa16.68■□□□□ 0.26
SREBF1-219ENST00000580540 NDUFAF2Q8N183 169 aa16.68■□□□□ 0.26
SREBF1-219ENST00000580540 GALNT15Q8N3T1 639 aa16.68■□□□□ 0.26
SREBF1-219ENST00000580540 SPC24Q8NBT2 197 aa16.68■□□□□ 0.26
SREBF1-219ENST00000580540 PLA2G15Q8NCC3 412 aa16.68■□□□□ 0.26
SREBF1-219ENST00000580540 BTN2A2Q8WVV5 523 aa16.68■□□□□ 0.26
SREBF1-219ENST00000580540 TSACCQ96A04 125 aaPredicted RBP16.68■□□□□ 0.26
SREBF1-219ENST00000580540 HDAC11Q96DB2 347 aa16.68■□□□□ 0.26
SREBF1-219ENST00000580540 NLGN3Q9NZ94 848 aa16.68■□□□□ 0.26
SREBF1-219ENST00000580540 CHKBQ9Y259 395 aa16.68■□□□□ 0.26
SREBF1-219ENST00000580540 PCDHGA1Q9Y5H4 931 aa16.68■□□□□ 0.26
SREBF1-219ENST00000580540 COL5A1P20908 1838 aaPredicted RBP16.68■□□□□ 0.26
SREBF1-219ENST00000580540 FAM221BA6H8Z2 402 aa16.67■□□□□ 0.26
SREBF1-219ENST00000580540 GOLGA6CA6NDK9 693 aa16.67■□□□□ 0.26
SREBF1-219ENST00000580540 GOLGA6BA6NDN3 693 aa16.67■□□□□ 0.26
SREBF1-219ENST00000580540 ZNF487B1APH4 448 aa16.67■□□□□ 0.26
SREBF1-219ENST00000580540 PSTPIP1O43586 416 aa16.67■□□□□ 0.26
SREBF1-219ENST00000580540 HEXIM1O94992 359 aaKnown RBP16.67■□□□□ 0.26
SREBF1-219ENST00000580540 PDHA1P08559 390 aa16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms