RNA–Protein interactions for RNA: ENST00000523261.1

NKX3-1-202, Transcript of NK3 homeobox 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NKX3-1, Length 713 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX3-1-202ENST00000523261 ZNF212Q9UDV6 495 aa13.95□□□□□ -0.18
NKX3-1-202ENST00000523261 SNX10Q9Y5X0 201 aa13.95□□□□□ -0.18
NKX3-1-202ENST00000523261 DIDO1Q9BTC0 2240 aaKnown RBP13.95□□□□□ -0.18
NKX3-1-202ENST00000523261 SVILO95425 2214 aa13.94□□□□□ -0.18
NKX3-1-202ENST00000523261 CDC14CA4D256 554 aa13.94□□□□□ -0.18
NKX3-1-202ENST00000523261 TNFRSF10CO14798 259 aa13.94□□□□□ -0.18
NKX3-1-202ENST00000523261 PPM1DO15297 605 aa13.94□□□□□ -0.18
NKX3-1-202ENST00000523261 ECEL1O95672 775 aa13.94□□□□□ -0.18
NKX3-1-202ENST00000523261 POP4O95707 220 aaKnown RBP13.94□□□□□ -0.18
NKX3-1-202ENST00000523261 GSRP00390 522 aa13.94□□□□□ -0.18
NKX3-1-202ENST00000523261 PCCBP05166 539 aa13.94□□□□□ -0.18
NKX3-1-202ENST00000523261 DLSTP36957 453 aa13.94□□□□□ -0.18
NKX3-1-202ENST00000523261 PGDP52209 483 aa13.94□□□□□ -0.18
NKX3-1-202ENST00000523261 KIAA1024LP59773 190 aa13.94□□□□□ -0.18
NKX3-1-202ENST00000523261 NME3Q13232 169 aa13.94□□□□□ -0.18
NKX3-1-202ENST00000523261 SEMA5AQ13591 1074 aa13.94□□□□□ -0.18
NKX3-1-202ENST00000523261 AGERQ15109 404 aa13.94□□□□□ -0.18
NKX3-1-202ENST00000523261 MYLK3Q32MK0 819 aa13.94□□□□□ -0.18
NKX3-1-202ENST00000523261 ARTNQ5T4W7 220 aa13.94□□□□□ -0.18
NKX3-1-202ENST00000523261 NRROSQ86YC3 692 aa13.94□□□□□ -0.18
NKX3-1-202ENST00000523261 PLA2G15Q8NCC3 412 aa13.94□□□□□ -0.18
NKX3-1-202ENST00000523261 OR2AP1Q8NGE2 309 aa13.94□□□□□ -0.18
NKX3-1-202ENST00000523261 PATE1Q8WXA2 126 aa13.94□□□□□ -0.18
NKX3-1-202ENST00000523261 FUBP1Q96AE4 644 aaKnown RBP13.94□□□□□ -0.18
NKX3-1-202ENST00000523261 MLXIPLQ9NP71 852 aa13.94□□□□□ -0.18
NKX3-1-202ENST00000523261 KCND3Q9UK17 655 aa13.94□□□□□ -0.18
NKX3-1-202ENST00000523261 CROTQ9UKG9 612 aa13.94□□□□□ -0.18
NKX3-1-202ENST00000523261 POLEQ07864 2286 aa13.94□□□□□ -0.18
NKX3-1-202ENST00000523261 IGLV3-10A0A075B6K4 115 aa13.93□□□□□ -0.18
NKX3-1-202ENST00000523261 CBX6O95503 412 aa13.93□□□□□ -0.18
NKX3-1-202ENST00000523261 CCNB1P14635 433 aa13.93□□□□□ -0.18
NKX3-1-202ENST00000523261 NR6A1Q15406 480 aa13.93□□□□□ -0.18
NKX3-1-202ENST00000523261 ZCWPW2Q504Y3 356 aa13.93□□□□□ -0.18
NKX3-1-202ENST00000523261 ZRANB3Q5FWF4 1079 aa13.93□□□□□ -0.18
NKX3-1-202ENST00000523261 PAPD7Q5XG87 772 aaKnown RBP13.93□□□□□ -0.18
NKX3-1-202ENST00000523261 ANKRD40Q6AI12 368 aa13.93□□□□□ -0.18
NKX3-1-202ENST00000523261 JMJD6Q6NYC1 403 aaPredicted RBP13.93□□□□□ -0.18
NKX3-1-202ENST00000523261 ARHGAP22Q7Z5H3 698 aa13.93□□□□□ -0.18
NKX3-1-202ENST00000523261 KAT5Q92993 513 aa13.93□□□□□ -0.18
NKX3-1-202ENST00000523261 PAGE5Q96GU1 130 aa13.93□□□□□ -0.18
NKX3-1-202ENST00000523261 LUZP4Q9P127 313 aa13.93□□□□□ -0.18
NKX3-1-202ENST00000523261 TAAR2Q9P1P5 351 aa13.93□□□□□ -0.18
NKX3-1-202ENST00000523261 SERTAD1Q9UHV2 236 aa13.93□□□□□ -0.18
NKX3-1-202ENST00000523261 PHTF1Q9UMS5 762 aa13.93□□□□□ -0.18
NKX3-1-202ENST00000523261 MAPK8IP1Q9UQF2 711 aa13.93□□□□□ -0.18
NKX3-1-202ENST00000523261 PCDHGA9Q9Y5G4 932 aaKnown RBP13.93□□□□□ -0.18
NKX3-1-202ENST00000523261 TACC2O95359 2948 aa13.92□□□□□ -0.18
NKX3-1-202ENST00000523261 CACNB4O00305 520 aaPredicted RBP13.92□□□□□ -0.18
NKX3-1-202ENST00000523261 INPP4BO15327 924 aa13.92□□□□□ -0.18
NKX3-1-202ENST00000523261 GLI1P08151 1106 aa13.92□□□□□ -0.18
NKX3-1-202ENST00000523261 SYT1P21579 422 aa13.92□□□□□ -0.18
NKX3-1-202ENST00000523261 VARSP26640 1264 aaKnown RBP13.92□□□□□ -0.18
NKX3-1-202ENST00000523261 SNRPD1P62314 119 aaKnown RBP13.92□□□□□ -0.18
NKX3-1-202ENST00000523261 GNA12Q03113 381 aa13.92□□□□□ -0.18
NKX3-1-202ENST00000523261 BIRC2Q13490 618 aa13.92□□□□□ -0.18
NKX3-1-202ENST00000523261 ZXDCQ2QGD7 858 aaPredicted RBP13.92□□□□□ -0.18
NKX3-1-202ENST00000523261 ATXN7L2Q5T6C5 722 aaPredicted RBP13.92□□□□□ -0.18
NKX3-1-202ENST00000523261 OTUD1Q5VV17 481 aaPredicted RBP13.92□□□□□ -0.18
NKX3-1-202ENST00000523261 TCERG1LQ5VWI1 586 aa13.92□□□□□ -0.18
NKX3-1-202ENST00000523261 LRRC31Q6UY01 552 aa13.92□□□□□ -0.18
NKX3-1-202ENST00000523261 CEP57L1Q8IYX8 460 aa13.92□□□□□ -0.18
NKX3-1-202ENST00000523261 NAGSQ8N159 534 aa13.92□□□□□ -0.18
NKX3-1-202ENST00000523261 ARHGEF2Q92974 986 aaKnown RBP13.92□□□□□ -0.18
NKX3-1-202ENST00000523261 SLC25A23Q9BV35 468 aa13.92□□□□□ -0.18
NKX3-1-202ENST00000523261 TWSG1Q9GZX9 223 aa13.92□□□□□ -0.18
NKX3-1-202ENST00000523261 TKTL2Q9H0I9 626 aa13.92□□□□□ -0.18
NKX3-1-202ENST00000523261 PIGVQ9NUD9 493 aa13.92□□□□□ -0.18
NKX3-1-202ENST00000523261 ASNSD1Q9NWL6 643 aa13.92□□□□□ -0.18
NKX3-1-202ENST00000523261 ARHGEF38Q9NXL2 777 aa13.92□□□□□ -0.18
NKX3-1-202ENST00000523261 MAP10Q9P2G4 905 aa13.92□□□□□ -0.18
NKX3-1-202ENST00000523261 CXorf51AA0A1B0GTR3 108 aa13.91□□□□□ -0.18
NKX3-1-202ENST00000523261 A8MU76 341 aa13.91□□□□□ -0.18
NKX3-1-202ENST00000523261 ACTN4O43707 911 aaKnown RBP13.91□□□□□ -0.18
NKX3-1-202ENST00000523261 KATNA1O75449 491 aa13.91□□□□□ -0.18
NKX3-1-202ENST00000523261 CREG1O75629 220 aa13.91□□□□□ -0.18
NKX3-1-202ENST00000523261 GRAP2O75791 330 aa13.91□□□□□ -0.18
NKX3-1-202ENST00000523261 RHOBTB3O94955 611 aa13.91□□□□□ -0.18
NKX3-1-202ENST00000523261 RECKO95980 971 aa13.91□□□□□ -0.18
NKX3-1-202ENST00000523261 EPB41P11171 864 aaKnown RBP13.91□□□□□ -0.18
NKX3-1-202ENST00000523261 KELP23276 732 aa13.91□□□□□ -0.18
NKX3-1-202ENST00000523261 STAT1P42224 750 aa13.91□□□□□ -0.18
NKX3-1-202ENST00000523261 NOP2P46087 812 aaKnown RBP13.91□□□□□ -0.18
NKX3-1-202ENST00000523261 GPLD1P80108 840 aa13.91□□□□□ -0.18
NKX3-1-202ENST00000523261 ELP6Q0PNE2 266 aa13.91□□□□□ -0.18
NKX3-1-202ENST00000523261 POLD3Q15054 466 aaPredicted RBP13.91□□□□□ -0.18
NKX3-1-202ENST00000523261 DCAF17Q5H9S7 520 aaPredicted RBP13.91□□□□□ -0.18
NKX3-1-202ENST00000523261 EFHC1Q5JVL4 640 aa13.91□□□□□ -0.18
NKX3-1-202ENST00000523261 SNAP47Q5SQN1 464 aa13.91□□□□□ -0.18
NKX3-1-202ENST00000523261 XYLT1Q86Y38 959 aa13.91□□□□□ -0.18
NKX3-1-202ENST00000523261 C19orf60Q96EN9 201 aa13.91□□□□□ -0.18
NKX3-1-202ENST00000523261 LGR4Q9BXB1 951 aa13.91□□□□□ -0.18
NKX3-1-202ENST00000523261 SLAMF7Q9NQ25 335 aa13.91□□□□□ -0.18
NKX3-1-202ENST00000523261 RRN3Q9NYV6 651 aa13.91□□□□□ -0.18
NKX3-1-202ENST00000523261 MOSPD1Q9UJG1 213 aa13.91□□□□□ -0.18
NKX3-1-202ENST00000523261 A0A1B0GTL3 188 aa13.9□□□□□ -0.18
NKX3-1-202ENST00000523261 PRSS38A1L453 326 aa13.9□□□□□ -0.18
NKX3-1-202ENST00000523261 PIPSLA2A3N6 862 aa13.9□□□□□ -0.18
NKX3-1-202ENST00000523261 A6NCN8 305 aa13.9□□□□□ -0.18
NKX3-1-202ENST00000523261 POLR1CO15160 346 aaPredicted RBP13.9□□□□□ -0.18
NKX3-1-202ENST00000523261 KRT86O43790 486 aa13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms