RNA–Protein interactions for RNA: ENST00000522117.5

SPIDR-217, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 2

Gene SPIDR, Length 2,745 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-217ENST00000522117 URGCPQ8TCY9 931 aa12.1□□□□□ -0.47
SPIDR-217ENST00000522117 TAS1R2Q8TE23 839 aa12.1□□□□□ -0.47
SPIDR-217ENST00000522117 SNAPC3Q92966 411 aa12.1□□□□□ -0.47
SPIDR-217ENST00000522117 NSUN4Q96CB9 384 aaKnown RBP12.1□□□□□ -0.47
SPIDR-217ENST00000522117 RIPOR3Q96MK2 946 aa12.1□□□□□ -0.47
SPIDR-217ENST00000522117 KCTD14Q9BQ13 255 aaPredicted RBP12.1□□□□□ -0.47
SPIDR-217ENST00000522117 C11orf70Q9BRQ4 267 aa12.1□□□□□ -0.47
SPIDR-217ENST00000522117 TTPALQ9BTX7 342 aa12.1□□□□□ -0.47
SPIDR-217ENST00000522117 DPEP3Q9H4B8 488 aa12.1□□□□□ -0.47
SPIDR-217ENST00000522117 MRPL40Q9NQ50 206 aaKnown RBP12.1□□□□□ -0.47
SPIDR-217ENST00000522117 FBXL12Q9NXK8 326 aa12.1□□□□□ -0.47
SPIDR-217ENST00000522117 POLG2Q9UHN1 485 aa12.1□□□□□ -0.47
SPIDR-217ENST00000522117 USP17L5A8MUK1 530 aa12.1□□□□□ -0.47
SPIDR-217ENST00000522117 PLK4O00444 970 aa12.1□□□□□ -0.47
SPIDR-217ENST00000522117 EXTL3O43909 919 aa12.1□□□□□ -0.47
SPIDR-217ENST00000522117 NTSR2O95665 410 aa12.1□□□□□ -0.47
SPIDR-217ENST00000522117 HSPA4LO95757 839 aa12.1□□□□□ -0.47
SPIDR-217ENST00000522117 CRHBPP24387 322 aa12.1□□□□□ -0.47
SPIDR-217ENST00000522117 ALDH4A1P30038 563 aa12.1□□□□□ -0.47
SPIDR-217ENST00000522117 UQCRC1P31930 480 aa12.1□□□□□ -0.47
SPIDR-217ENST00000522117 C1QBPQ07021 282 aaKnown RBP12.1□□□□□ -0.47
SPIDR-217ENST00000522117 ZNF252P-AS1Q0IIN9 211 aa12.1□□□□□ -0.47
SPIDR-217ENST00000522117 TTBK2Q6IQ55 1244 aa12.1□□□□□ -0.47
SPIDR-217ENST00000522117 FAM171BQ6P995 826 aa12.1□□□□□ -0.47
SPIDR-217ENST00000522117 PAGE2Q7Z2X7 111 aa12.1□□□□□ -0.47
SPIDR-217ENST00000522117 RIOX2Q8IUF8 465 aa12.1□□□□□ -0.47
SPIDR-217ENST00000522117 EID3Q8N140 333 aa12.1□□□□□ -0.47
SPIDR-217ENST00000522117 OR13J1Q8NGT2 312 aa12.1□□□□□ -0.47
SPIDR-217ENST00000522117 SLIRPQ9GZT3 109 aaKnown RBP12.1□□□□□ -0.47
SPIDR-217ENST00000522117 JMJD4Q9H9V9 463 aa12.1□□□□□ -0.47
SPIDR-217ENST00000522117 FBXO5Q9UKT4 447 aa12.1□□□□□ -0.47
SPIDR-217ENST00000522117 RBBP6Q7Z6E9 1792 aaKnown RBP12.1□□□□□ -0.47
SPIDR-217ENST00000522117 C3orf70A6NLC5 250 aaPredicted RBP12.1□□□□□ -0.47
SPIDR-217ENST00000522117 KCNU1A8MYU2 1149 aa12.1□□□□□ -0.47
SPIDR-217ENST00000522117 SSX4O60224 188 aa12.1□□□□□ -0.47
SPIDR-217ENST00000522117 SEMA3DO95025 777 aa12.1□□□□□ -0.47
SPIDR-217ENST00000522117 CYP2A7P20853 494 aa12.1□□□□□ -0.47
SPIDR-217ENST00000522117 NSFP46459 744 aaKnown RBP12.1□□□□□ -0.47
SPIDR-217ENST00000522117 GYG1P46976 350 aa12.1□□□□□ -0.47
SPIDR-217ENST00000522117 SERPINB9P50453 376 aa12.1□□□□□ -0.47
SPIDR-217ENST00000522117 SKIV2LQ15477 1246 aaKnown RBP12.1□□□□□ -0.47
SPIDR-217ENST00000522117 TAF12Q16514 161 aa12.1□□□□□ -0.47
SPIDR-217ENST00000522117 TBCELQ5QJ74 424 aa12.1□□□□□ -0.47
SPIDR-217ENST00000522117 NXNL2Q5VZ03 156 aa12.1□□□□□ -0.47
SPIDR-217ENST00000522117 KIAA1614Q5VZ46 1190 aa12.1□□□□□ -0.47
SPIDR-217ENST00000522117 R3HCC1LQ7Z5L2 792 aaKnown RBP12.1□□□□□ -0.47
SPIDR-217ENST00000522117 CDR2LQ86X02 465 aaPredicted RBP12.1□□□□□ -0.47
SPIDR-217ENST00000522117 CMTR2Q8IYT2 770 aaKnown RBP12.1□□□□□ -0.47
SPIDR-217ENST00000522117 NLGN4XQ8N0W4 816 aa12.1□□□□□ -0.47
SPIDR-217ENST00000522117 LRRC47Q8N1G4 583 aaKnown RBP12.1□□□□□ -0.47
SPIDR-217ENST00000522117 SLC2A14Q8TDB8 520 aa12.1□□□□□ -0.47
SPIDR-217ENST00000522117 SLC22A17Q8WUG5 538 aa12.1□□□□□ -0.47
SPIDR-217ENST00000522117 CEP170P1Q96L14 293 aa12.1□□□□□ -0.47
SPIDR-217ENST00000522117 MUS81Q96NY9 551 aa12.1□□□□□ -0.47
SPIDR-217ENST00000522117 RBAKQ9NYW8 714 aaPredicted RBP12.1□□□□□ -0.47
SPIDR-217ENST00000522117 ACTR3BQ9P1U1 418 aa12.1□□□□□ -0.47
SPIDR-217ENST00000522117 SARDHQ9UL12 918 aa12.1□□□□□ -0.47
SPIDR-217ENST00000522117 BAG5Q9UL15 447 aa12.1□□□□□ -0.47
SPIDR-217ENST00000522117 TPP1O14773 563 aa12.09□□□□□ -0.47
SPIDR-217ENST00000522117 PPP1R11O60927 126 aaPredicted RBP12.09□□□□□ -0.47
SPIDR-217ENST00000522117 CFHP08603 1231 aa12.09□□□□□ -0.47
SPIDR-217ENST00000522117 GMPRP36959 345 aa12.09□□□□□ -0.47
SPIDR-217ENST00000522117 NT5C2P49902 561 aa12.09□□□□□ -0.47
SPIDR-217ENST00000522117 SRP54P61011 504 aaKnown RBP12.09□□□□□ -0.47
SPIDR-217ENST00000522117 GHRHRQ02643 423 aa12.09□□□□□ -0.47
SPIDR-217ENST00000522117 PIGFQ07326 219 aa12.09□□□□□ -0.47
SPIDR-217ENST00000522117 WDR44Q5JSH3 913 aa12.09□□□□□ -0.47
SPIDR-217ENST00000522117 GK5Q6ZS86 529 aa12.09□□□□□ -0.47
SPIDR-217ENST00000522117 C1orf186Q6ZWK4 172 aa12.09□□□□□ -0.47
SPIDR-217ENST00000522117 LRRTM3Q86VH5 581 aa12.09□□□□□ -0.47
SPIDR-217ENST00000522117 SVOPQ8N4V2 548 aa12.09□□□□□ -0.47
SPIDR-217ENST00000522117 LRRC20Q8TCA0 184 aa12.09□□□□□ -0.47
SPIDR-217ENST00000522117 STON2Q8WXE9 905 aa12.09□□□□□ -0.47
SPIDR-217ENST00000522117 BIRC7Q96CA5 298 aa12.09□□□□□ -0.47
SPIDR-217ENST00000522117 ATF5Q9Y2D1 282 aaPredicted RBP12.09□□□□□ -0.47
SPIDR-217ENST00000522117 SAGE2PA6NJ88 616 aa12.09□□□□□ -0.47
SPIDR-217ENST00000522117 PMM2O15305 246 aa12.09□□□□□ -0.47
SPIDR-217ENST00000522117 ZNF780AO75290 641 aaPredicted RBP12.09□□□□□ -0.47
SPIDR-217ENST00000522117 PSMA3P25788 255 aa12.09□□□□□ -0.47
SPIDR-217ENST00000522117 GTF2E2P29084 291 aaKnown RBP12.09□□□□□ -0.47
SPIDR-217ENST00000522117 RPL7AP62424 266 aaKnown RBP12.09□□□□□ -0.47
SPIDR-217ENST00000522117 LIN9Q5TKA1 542 aa12.09□□□□□ -0.47
SPIDR-217ENST00000522117 LRRC38Q5VT99 294 aa12.09□□□□□ -0.47
SPIDR-217ENST00000522117 USP17L6PQ6QN14 398 aa12.09□□□□□ -0.47
SPIDR-217ENST00000522117 MILR1Q7Z6M3 343 aa12.09□□□□□ -0.47
SPIDR-217ENST00000522117 DHFR2Q86XF0 187 aa12.09□□□□□ -0.47
SPIDR-217ENST00000522117 NLGN1Q8N2Q7 840 aa12.09□□□□□ -0.47
SPIDR-217ENST00000522117 CENPNQ96H22 339 aaPredicted RBP12.09□□□□□ -0.47
SPIDR-217ENST00000522117 ZNF277Q9NRM2 450 aaPredicted RBP12.09□□□□□ -0.47
SPIDR-217ENST00000522117 FARSBQ9NSD9 589 aaKnown RBP12.09□□□□□ -0.47
SPIDR-217ENST00000522117 COPG1Q9Y678 874 aaKnown RBP12.09□□□□□ -0.47
SPIDR-217ENST00000522117 BRWD3Q6RI45 1802 aa12.08□□□□□ -0.48
SPIDR-217ENST00000522117 PNMA6FA0A0J9YX94 578 aa12.08□□□□□ -0.48
SPIDR-217ENST00000522117 GFAPP14136 432 aa12.08□□□□□ -0.48
SPIDR-217ENST00000522117 MPSTP25325 297 aa12.08□□□□□ -0.48
SPIDR-217ENST00000522117 GRK3P35626 688 aa12.08□□□□□ -0.48
SPIDR-217ENST00000522117 RPS9P46781 194 aaKnown RBP12.08□□□□□ -0.48
SPIDR-217ENST00000522117 SERPINH1P50454 418 aaKnown RBP12.08□□□□□ -0.48
SPIDR-217ENST00000522117 LSM3P62310 102 aaKnown RBP12.08□□□□□ -0.48
SPIDR-217ENST00000522117 INCA1Q0VD86 236 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms