RNA–Protein interactions for RNA: ENST00000471261.2

PPP1R3F-204, Transcript of protein phosphatase 1 regulatory subunit 3F, humanhuman

TSL 3

Gene PPP1R3F, Length 503 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1R3F-204ENST00000471261 TSGA13Q96PP4 275 aa12.68□□□□□ -0.38
PPP1R3F-204ENST00000471261 CNTNAP3Q9BZ76 1288 aa12.68□□□□□ -0.38
PPP1R3F-204ENST00000471261 UCKL1Q9NWZ5 548 aa12.68□□□□□ -0.38
PPP1R3F-204ENST00000471261 IMPACTQ9P2X3 320 aa12.68□□□□□ -0.38
PPP1R3F-204ENST00000471261 B4GALT6Q9UBX8 382 aa12.68□□□□□ -0.38
PPP1R3F-204ENST00000471261 SALL4Q9UJQ4 1053 aa12.68□□□□□ -0.38
PPP1R3F-204ENST00000471261 SBDSQ9Y3A5 250 aaKnown RBP eCLIP12.68□□□□□ -0.38
PPP1R3F-204ENST00000471261 REXO2Q9Y3B8 237 aaKnown RBP12.68□□□□□ -0.38
PPP1R3F-204ENST00000471261 RAI2Q9Y5P3 530 aa12.68□□□□□ -0.38
PPP1R3F-204ENST00000471261 ASPMQ8IZT6 3477 aa12.67□□□□□ -0.38
PPP1R3F-204ENST00000471261 CEP295Q9C0D2 2601 aa12.67□□□□□ -0.38
PPP1R3F-204ENST00000471261 A0A1W2PQ67 120 aa12.67□□□□□ -0.38
PPP1R3F-204ENST00000471261 H3BM21 787 aa12.67□□□□□ -0.38
PPP1R3F-204ENST00000471261 ENC1O14682 589 aa12.67□□□□□ -0.38
PPP1R3F-204ENST00000471261 PPP1R12AO14974 1030 aaPredicted RBP12.67□□□□□ -0.38
PPP1R3F-204ENST00000471261 PIAS2O75928 621 aa12.67□□□□□ -0.38
PPP1R3F-204ENST00000471261 RECQL5O94762 991 aaPredicted RBP12.67□□□□□ -0.38
PPP1R3F-204ENST00000471261 ZRANB2O95218 330 aaKnown RBP eCLIP12.67□□□□□ -0.38
PPP1R3F-204ENST00000471261 PGLSO95336 258 aa12.67□□□□□ -0.38
PPP1R3F-204ENST00000471261 CTPS1P17812 591 aa12.67□□□□□ -0.38
PPP1R3F-204ENST00000471261 CDKN2BP42772 138 aa12.67□□□□□ -0.38
PPP1R3F-204ENST00000471261 MARCKSL1P49006 195 aa12.67□□□□□ -0.38
PPP1R3F-204ENST00000471261 EPHB1P54762 984 aa12.67□□□□□ -0.38
PPP1R3F-204ENST00000471261 SHC2P98077 582 aa12.67□□□□□ -0.38
PPP1R3F-204ENST00000471261 PPIDQ08752 370 aaKnown RBP12.67□□□□□ -0.38
PPP1R3F-204ENST00000471261 RALGDSQ12967 914 aa12.67□□□□□ -0.38
PPP1R3F-204ENST00000471261 ZBTB17Q13105 803 aa12.67□□□□□ -0.38
PPP1R3F-204ENST00000471261 INPP5AQ14642 412 aa12.67□□□□□ -0.38
PPP1R3F-204ENST00000471261 LIPIQ6XZB0 460 aa12.67□□□□□ -0.38
PPP1R3F-204ENST00000471261 SPOCD1Q6ZMY3 1216 aa12.67□□□□□ -0.38
PPP1R3F-204ENST00000471261 USP45Q70EL2 814 aa12.67□□□□□ -0.38
PPP1R3F-204ENST00000471261 SLC25A45Q8N413 288 aa12.67□□□□□ -0.38
PPP1R3F-204ENST00000471261 FATE1Q969F0 183 aa12.67□□□□□ -0.38
PPP1R3F-204ENST00000471261 DESI2Q9BSY9 194 aa12.67□□□□□ -0.38
PPP1R3F-204ENST00000471261 CEP41Q9BYV8 373 aa12.67□□□□□ -0.38
PPP1R3F-204ENST00000471261 LACRTQ9GZZ8 138 aa12.67□□□□□ -0.38
PPP1R3F-204ENST00000471261 GPR27Q9NS67 375 aa12.67□□□□□ -0.38
PPP1R3F-204ENST00000471261 TOR4AQ9NXH8 423 aa12.67□□□□□ -0.38
PPP1R3F-204ENST00000471261 SAE1Q9UBE0 346 aaPredicted RBP12.67□□□□□ -0.38
PPP1R3F-204ENST00000471261 KLK13Q9UKR3 277 aa12.67□□□□□ -0.38
PPP1R3F-204ENST00000471261 PHTF1Q9UMS5 762 aa12.67□□□□□ -0.38
PPP1R3F-204ENST00000471261 OR1A2Q9Y585 309 aa12.67□□□□□ -0.38
PPP1R3F-204ENST00000471261 CST8O60676 142 aa12.66□□□□□ -0.38
PPP1R3F-204ENST00000471261 CSF2P04141 144 aa12.66□□□□□ -0.38
PPP1R3F-204ENST00000471261 PDHA1P08559 390 aa12.66□□□□□ -0.38
PPP1R3F-204ENST00000471261 ALPIP09923 528 aa12.66□□□□□ -0.38
PPP1R3F-204ENST00000471261 CYP2A6P11509 494 aaPredicted RBP12.66□□□□□ -0.38
PPP1R3F-204ENST00000471261 NME1P15531 152 aaKnown RBP12.66□□□□□ -0.38
PPP1R3F-204ENST00000471261 JUNDP17535 347 aa12.66□□□□□ -0.38
PPP1R3F-204ENST00000471261 CA4P22748 312 aa12.66□□□□□ -0.38
PPP1R3F-204ENST00000471261 CES1P23141 567 aa12.66□□□□□ -0.38
PPP1R3F-204ENST00000471261 VIPR1P32241 457 aa12.66□□□□□ -0.38
PPP1R3F-204ENST00000471261 VAV2P52735 878 aa12.66□□□□□ -0.38
PPP1R3F-204ENST00000471261 HNRNPKP61978 463 aaKnown RBP eCLIP12.66□□□□□ -0.38
PPP1R3F-204ENST00000471261 YPEL5P62699 121 aa12.66□□□□□ -0.38
PPP1R3F-204ENST00000471261 DNAJC3Q13217 504 aa12.66□□□□□ -0.38
PPP1R3F-204ENST00000471261 ARHGEF7Q14155 803 aa12.66□□□□□ -0.38
PPP1R3F-204ENST00000471261 TFDP2Q14188 446 aa12.66□□□□□ -0.38
PPP1R3F-204ENST00000471261 PTPRRQ15256 657 aa12.66□□□□□ -0.38
PPP1R3F-204ENST00000471261 TFDP3Q5H9I0 405 aa12.66□□□□□ -0.38
PPP1R3F-204ENST00000471261 FAM182AQ5T1J6 154 aa12.66□□□□□ -0.38
PPP1R3F-204ENST00000471261 KANSL1Q7Z3B3 1105 aa12.66□□□□□ -0.38
PPP1R3F-204ENST00000471261 TMEM139Q8IV31 216 aa12.66□□□□□ -0.38
PPP1R3F-204ENST00000471261 KATNAL2Q8IYT4 538 aa12.66□□□□□ -0.38
PPP1R3F-204ENST00000471261 RCOR2Q8IZ40 523 aa12.66□□□□□ -0.38
PPP1R3F-204ENST00000471261 NDUFAF2Q8N183 169 aa12.66□□□□□ -0.38
PPP1R3F-204ENST00000471261 PLA2G15Q8NCC3 412 aa12.66□□□□□ -0.38
PPP1R3F-204ENST00000471261 ZNF548Q8NEK5 533 aaPredicted RBP12.66□□□□□ -0.38
PPP1R3F-204ENST00000471261 KRT35Q92764 455 aa12.66□□□□□ -0.38
PPP1R3F-204ENST00000471261 HAUS1Q96CS2 278 aa12.66□□□□□ -0.38
PPP1R3F-204ENST00000471261 IFT43Q96FT9 208 aa12.66□□□□□ -0.38
PPP1R3F-204ENST00000471261 AGAP3Q96P47 875 aa12.66□□□□□ -0.38
PPP1R3F-204ENST00000471261 AMACRQ9UHK6 382 aa12.66□□□□□ -0.38
PPP1R3F-204ENST00000471261 KLF15Q9UIH9 416 aa12.66□□□□□ -0.38
PPP1R3F-204ENST00000471261 WASF3Q9UPY6 502 aa12.66□□□□□ -0.38
PPP1R3F-204ENST00000471261 CHKBQ9Y259 395 aa12.66□□□□□ -0.38
PPP1R3F-204ENST00000471261 CHD8Q9HCK8 2581 aa12.66□□□□□ -0.38
PPP1R3F-204ENST00000471261 TP53BP1Q12888 1972 aaPredicted RBP12.65□□□□□ -0.38
PPP1R3F-204ENST00000471261 SHROOM3Q8TF72 1996 aa12.65□□□□□ -0.38
PPP1R3F-204ENST00000471261 MACROD2A1Z1Q3 448 aa12.65□□□□□ -0.38
PPP1R3F-204ENST00000471261 CFAP69A5D8W1 941 aa12.65□□□□□ -0.38
PPP1R3F-204ENST00000471261 GOLGA6CA6NDK9 693 aa12.65□□□□□ -0.38
PPP1R3F-204ENST00000471261 GOLGA6BA6NDN3 693 aa12.65□□□□□ -0.38
PPP1R3F-204ENST00000471261 NEMP2A6NFY4 417 aa12.65□□□□□ -0.38
PPP1R3F-204ENST00000471261 NPIPB15A6NHN6 443 aaPredicted RBP12.65□□□□□ -0.38
PPP1R3F-204ENST00000471261 TRIM38O00635 465 aa12.65□□□□□ -0.38
PPP1R3F-204ENST00000471261 TOR1BO14657 336 aa12.65□□□□□ -0.38
PPP1R3F-204ENST00000471261 SIGLEC6O43699 453 aa12.65□□□□□ -0.38
PPP1R3F-204ENST00000471261 GOLGA6DP0CG33 693 aa12.65□□□□□ -0.38
PPP1R3F-204ENST00000471261 ALPPL2P10696 532 aa12.65□□□□□ -0.38
PPP1R3F-204ENST00000471261 HTR1BP28222 390 aa12.65□□□□□ -0.38
PPP1R3F-204ENST00000471261 CD86P42081 329 aa12.65□□□□□ -0.38
PPP1R3F-204ENST00000471261 NR2C2P49116 596 aa12.65□□□□□ -0.38
PPP1R3F-204ENST00000471261 NIPAL4Q0D2K0 466 aa12.65□□□□□ -0.38
PPP1R3F-204ENST00000471261 EIF2B5Q13144 721 aaKnown RBP12.65□□□□□ -0.38
PPP1R3F-204ENST00000471261 TCEA2Q15560 299 aa12.65□□□□□ -0.38
PPP1R3F-204ENST00000471261 CNGA3Q16281 694 aa12.65□□□□□ -0.38
PPP1R3F-204ENST00000471261 FAXCQ5TGI0 409 aa12.65□□□□□ -0.38
PPP1R3F-204ENST00000471261 ALG1LQ6GMV1 187 aa12.65□□□□□ -0.38
PPP1R3F-204ENST00000471261 MACC1Q6ZN28 852 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms