RNA–Protein interactions for RNA: ENST00000467996.1

RNF13-208, Transcript of ring finger protein 13, humanhuman

TSL 5

Gene RNF13, Length 767 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF13-208ENST00000467996 CEP128Q6ZU80 1094 aa11.9□□□□□ -0.5
RNF13-208ENST00000467996 USP45Q70EL2 814 aa11.9□□□□□ -0.5
RNF13-208ENST00000467996 TMC3Q7Z5M5 1100 aa11.9□□□□□ -0.5
RNF13-208ENST00000467996 ANKMY2Q8IV38 441 aa11.9□□□□□ -0.5
RNF13-208ENST00000467996 ZBED8Q8IZ13 594 aa11.9□□□□□ -0.5
RNF13-208ENST00000467996 AADATQ8N5Z0 425 aa11.9□□□□□ -0.5
RNF13-208ENST00000467996 BLOC1S5Q8TDH9 187 aa11.9□□□□□ -0.5
RNF13-208ENST00000467996 LRRC39Q96DD0 335 aa11.9□□□□□ -0.5
RNF13-208ENST00000467996 MCCC1Q96RQ3 725 aaPredicted RBP11.9□□□□□ -0.5
RNF13-208ENST00000467996 DYRK4Q9NR20 520 aa11.9□□□□□ -0.5
RNF13-208ENST00000467996 C2orf42Q9NWW7 574 aa11.9□□□□□ -0.5
RNF13-208ENST00000467996 CHMP2BQ9UQN3 213 aa11.9□□□□□ -0.5
RNF13-208ENST00000467996 PPIL1Q9Y3C6 166 aa11.9□□□□□ -0.5
RNF13-208ENST00000467996 SIT1Q9Y3P8 196 aa11.9□□□□□ -0.5
RNF13-208ENST00000467996 ZNF711Q9Y462 761 aa11.9□□□□□ -0.5
RNF13-208ENST00000467996 TEX264Q9Y6I9 313 aa11.9□□□□□ -0.5
RNF13-208ENST00000467996 DNTTP04053 509 aa11.89□□□□□ -0.51
RNF13-208ENST00000467996 DCNP07585 359 aaKnown RBP11.89□□□□□ -0.51
RNF13-208ENST00000467996 C7P10643 843 aa11.89□□□□□ -0.51
RNF13-208ENST00000467996 ADRB3P13945 408 aa11.89□□□□□ -0.51
RNF13-208ENST00000467996 TIMP2P16035 220 aa11.89□□□□□ -0.51
RNF13-208ENST00000467996 GABRG2P18507 467 aa11.89□□□□□ -0.51
RNF13-208ENST00000467996 NDUFV2P19404 249 aa11.89□□□□□ -0.51
RNF13-208ENST00000467996 C5AR1P21730 350 aa11.89□□□□□ -0.51
RNF13-208ENST00000467996 XPAP23025 273 aaPredicted RBP11.89□□□□□ -0.51
RNF13-208ENST00000467996 HNF1BP35680 557 aa11.89□□□□□ -0.51
RNF13-208ENST00000467996 P2RY2P41231 377 aa11.89□□□□□ -0.51
RNF13-208ENST00000467996 ABL2P42684 1182 aa11.89□□□□□ -0.51
RNF13-208ENST00000467996 MAGEA4P43358 317 aa11.89□□□□□ -0.51
RNF13-208ENST00000467996 NEK3P51956 506 aa11.89□□□□□ -0.51
RNF13-208ENST00000467996 DGKEP52429 567 aa11.89□□□□□ -0.51
RNF13-208ENST00000467996 POLR2LP62875 67 aaKnown RBP11.89□□□□□ -0.51
RNF13-208ENST00000467996 SEPT6Q14141 434 aa11.89□□□□□ -0.51
RNF13-208ENST00000467996 SLMAPQ14BN4 828 aa11.89□□□□□ -0.51
RNF13-208ENST00000467996 MAP9Q49MG5 647 aa11.89□□□□□ -0.51
RNF13-208ENST00000467996 CCDC38Q502W7 563 aa11.89□□□□□ -0.51
RNF13-208ENST00000467996 CASC4Q6P4E1 433 aa11.89□□□□□ -0.51
RNF13-208ENST00000467996 FBXL19Q6PCT2 694 aa11.89□□□□□ -0.51
RNF13-208ENST00000467996 ERN2Q76MJ5 926 aaKnown RBP11.89□□□□□ -0.51
RNF13-208ENST00000467996 GLT6D1Q7Z4J2 308 aa11.89□□□□□ -0.51
RNF13-208ENST00000467996 TMPRSS6Q8IU80 811 aa11.89□□□□□ -0.51
RNF13-208ENST00000467996 RELL1Q8IUW5 271 aa11.89□□□□□ -0.51
RNF13-208ENST00000467996 IGDCC3Q8IVU1 814 aa11.89□□□□□ -0.51
RNF13-208ENST00000467996 NDUFAF2Q8N183 169 aa11.89□□□□□ -0.51
RNF13-208ENST00000467996 FBXO36Q8NEA4 188 aa11.89□□□□□ -0.51
RNF13-208ENST00000467996 PPHLN1Q8NEY8 458 aaKnown RBP11.89□□□□□ -0.51
RNF13-208ENST00000467996 MDGA1Q8NFP4 955 aa11.89□□□□□ -0.51
RNF13-208ENST00000467996 CAVIN3Q969G5 261 aa11.89□□□□□ -0.51
RNF13-208ENST00000467996 STAMBPL1Q96FJ0 436 aa11.89□□□□□ -0.51
RNF13-208ENST00000467996 SCRN2Q96FV2 425 aa11.89□□□□□ -0.51
RNF13-208ENST00000467996 MRGPRX1Q96LB2 322 aa11.89□□□□□ -0.51
RNF13-208ENST00000467996 C9orf72Q96LT7 481 aa11.89□□□□□ -0.51
RNF13-208ENST00000467996 RANBP9Q96S59 729 aa11.89□□□□□ -0.51
RNF13-208ENST00000467996 LYSMD1Q96S90 227 aa11.89□□□□□ -0.51
RNF13-208ENST00000467996 EBNA1BP2Q99848 306 aaKnown RBP11.89□□□□□ -0.51
RNF13-208ENST00000467996 TRIM56Q9BRZ2 755 aaKnown RBP11.89□□□□□ -0.51
RNF13-208ENST00000467996 HDAC8Q9BY41 377 aa11.89□□□□□ -0.51
RNF13-208ENST00000467996 TXLNGYQ9BZA5 131 aa11.89□□□□□ -0.51
RNF13-208ENST00000467996 PABPC3Q9H361 631 aaKnown RBP11.89□□□□□ -0.51
RNF13-208ENST00000467996 CDC42EP4Q9H3Q1 356 aaKnown RBP11.89□□□□□ -0.51
RNF13-208ENST00000467996 MAGEE1Q9HCI5 957 aa11.89□□□□□ -0.51
RNF13-208ENST00000467996 POLMQ9NP87 494 aaPredicted RBP11.89□□□□□ -0.51
RNF13-208ENST00000467996 PCDH12Q9NPG4 1184 aa11.89□□□□□ -0.51
RNF13-208ENST00000467996 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP11.89□□□□□ -0.51
RNF13-208ENST00000467996 HACD3Q9P035 362 aa11.89□□□□□ -0.51
RNF13-208ENST00000467996 SAMD15Q9P1V8 674 aa11.89□□□□□ -0.51
RNF13-208ENST00000467996 B4GALT6Q9UBX8 382 aa11.89□□□□□ -0.51
RNF13-208ENST00000467996 SERGEFQ9UGK8 458 aa11.89□□□□□ -0.51
RNF13-208ENST00000467996 SOX13Q9UN79 622 aa11.89□□□□□ -0.51
RNF13-208ENST00000467996 TCAF1Q9Y4C2 921 aa11.89□□□□□ -0.51
RNF13-208ENST00000467996 MAD1L1Q9Y6D9 718 aa11.89□□□□□ -0.51
RNF13-208ENST00000467996 PLXND1Q9Y4D7 1925 aa11.89□□□□□ -0.51
RNF13-208ENST00000467996 EML5Q05BV3 1969 aa11.88□□□□□ -0.51
RNF13-208ENST00000467996 TECTAO75443 2155 aa11.88□□□□□ -0.51
RNF13-208ENST00000467996 A0A0U1RQS6 177 aa11.88□□□□□ -0.51
RNF13-208ENST00000467996 A0A1W2PP55 124 aa11.88□□□□□ -0.51
RNF13-208ENST00000467996 CCDC78A2IDD5 438 aa11.88□□□□□ -0.51
RNF13-208ENST00000467996 HEATR9A2RTY3 570 aa11.88□□□□□ -0.51
RNF13-208ENST00000467996 AURKAO14965 403 aa11.88□□□□□ -0.51
RNF13-208ENST00000467996 SPINT1O43278 529 aa11.88□□□□□ -0.51
RNF13-208ENST00000467996 ERLIN1O75477 346 aa11.88□□□□□ -0.51
RNF13-208ENST00000467996 SLC4A1P02730 911 aa11.88□□□□□ -0.51
RNF13-208ENST00000467996 H2AFXP16104 143 aaPredicted RBP11.88□□□□□ -0.51
RNF13-208ENST00000467996 PGAM1P18669 254 aa11.88□□□□□ -0.51
RNF13-208ENST00000467996 LHCGRP22888 699 aa11.88□□□□□ -0.51
RNF13-208ENST00000467996 ADRA1DP25100 572 aa11.88□□□□□ -0.51
RNF13-208ENST00000467996 NFKBIAP25963 317 aa11.88□□□□□ -0.51
RNF13-208ENST00000467996 VIPR1P32241 457 aa11.88□□□□□ -0.51
RNF13-208ENST00000467996 MMP12P39900 470 aa11.88□□□□□ -0.51
RNF13-208ENST00000467996 SEMG2Q02383 582 aa11.88□□□□□ -0.51
RNF13-208ENST00000467996 ZBTB16Q05516 673 aa11.88□□□□□ -0.51
RNF13-208ENST00000467996 CNTN1Q12860 1018 aa11.88□□□□□ -0.51
RNF13-208ENST00000467996 TAF1AQ15573 450 aaPredicted RBP11.88□□□□□ -0.51
RNF13-208ENST00000467996 CDKN3Q16667 212 aa11.88□□□□□ -0.51
RNF13-208ENST00000467996 TTC31Q49AM3 519 aaPredicted RBP11.88□□□□□ -0.51
RNF13-208ENST00000467996 PCID2Q5JVF3 399 aa11.88□□□□□ -0.51
RNF13-208ENST00000467996 UBAP2Q5T6F2 1119 aaKnown RBP11.88□□□□□ -0.51
RNF13-208ENST00000467996 PIP5KL1Q5T9C9 394 aa11.88□□□□□ -0.51
RNF13-208ENST00000467996 AGBL4Q5VU57 503 aa11.88□□□□□ -0.51
RNF13-208ENST00000467996 ARMC3Q5W041 872 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms