RNA–Protein interactions for RNA: ENST00000462146.6

PDZRN3-203, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 2 BASIC

Gene PDZRN3, Length 2,927 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-203ENST00000462146 MAP10Q9P2G4 905 aa11.79□□□□□ -0.52
PDZRN3-203ENST00000462146 PIN4Q9Y237 131 aaKnown RBP11.79□□□□□ -0.52
PDZRN3-203ENST00000462146 ZNF711Q9Y462 761 aa11.79□□□□□ -0.52
PDZRN3-203ENST00000462146 TRAF6Q9Y4K3 522 aa11.79□□□□□ -0.52
PDZRN3-203ENST00000462146 ADM5C9JUS6 153 aa11.79□□□□□ -0.52
PDZRN3-203ENST00000462146 MTSS1O43312 755 aa11.79□□□□□ -0.52
PDZRN3-203ENST00000462146 BMP2P12643 396 aa11.79□□□□□ -0.52
PDZRN3-203ENST00000462146 TPP2P29144 1249 aaPredicted RBP11.79□□□□□ -0.52
PDZRN3-203ENST00000462146 YAP1P46937 504 aaKnown RBP11.79□□□□□ -0.52
PDZRN3-203ENST00000462146 APLP1P51693 650 aa11.79□□□□□ -0.52
PDZRN3-203ENST00000462146 FAM83EQ2M2I3 478 aa11.79□□□□□ -0.52
PDZRN3-203ENST00000462146 VPS26BQ4G0F5 336 aa11.79□□□□□ -0.52
PDZRN3-203ENST00000462146 TMEM207Q6UWW9 146 aa11.79□□□□□ -0.52
PDZRN3-203ENST00000462146 LIMS2Q7Z4I7 341 aa11.79□□□□□ -0.52
PDZRN3-203ENST00000462146 LINC00523Q86TU6 105 aa11.79□□□□□ -0.52
PDZRN3-203ENST00000462146 SMYD1Q8NB12 490 aa11.79□□□□□ -0.52
PDZRN3-203ENST00000462146 NPLQ9BXD5 320 aaPredicted RBP11.79□□□□□ -0.52
PDZRN3-203ENST00000462146 BRD8Q9H0E9 1235 aa11.79□□□□□ -0.52
PDZRN3-203ENST00000462146 DSEQ9UL01 958 aa11.79□□□□□ -0.52
PDZRN3-203ENST00000462146 CSADQ9Y600 493 aa11.79□□□□□ -0.52
PDZRN3-203ENST00000462146 RAD54BQ9Y620 910 aa11.79□□□□□ -0.52
PDZRN3-203ENST00000462146 CEP350Q5VT06 3117 aa11.79□□□□□ -0.52
PDZRN3-203ENST00000462146 TTC3P53804 2025 aa11.79□□□□□ -0.52
PDZRN3-203ENST00000462146 A0A087X1B8 175 aa11.78□□□□□ -0.52
PDZRN3-203ENST00000462146 A0A1W2PPW3 197 aa11.78□□□□□ -0.52
PDZRN3-203ENST00000462146 MYBPHLA2RUH7 354 aa11.78□□□□□ -0.52
PDZRN3-203ENST00000462146 LRRC14BA6NHZ5 514 aa11.78□□□□□ -0.52
PDZRN3-203ENST00000462146 HLA-DQB2P05538 268 aa11.78□□□□□ -0.52
PDZRN3-203ENST00000462146 COL1A2P08123 1366 aa11.78□□□□□ -0.52
PDZRN3-203ENST00000462146 CCNA1P78396 465 aa11.78□□□□□ -0.52
PDZRN3-203ENST00000462146 KIF19Q2TAC6 998 aa11.78□□□□□ -0.52
PDZRN3-203ENST00000462146 SV2CQ496J9 727 aa11.78□□□□□ -0.52
PDZRN3-203ENST00000462146 GPR107Q5VW38 600 aa11.78□□□□□ -0.52
PDZRN3-203ENST00000462146 LARP4Q71RC2 724 aaKnown RBP eCLIP11.78□□□□□ -0.52
PDZRN3-203ENST00000462146 FASTKD5Q7L8L6 764 aaKnown RBP11.78□□□□□ -0.52
PDZRN3-203ENST00000462146 BHLHA9Q7RTU4 235 aa11.78□□□□□ -0.52
PDZRN3-203ENST00000462146 LYSMD3Q7Z3D4 306 aa11.78□□□□□ -0.52
PDZRN3-203ENST00000462146 PIM3Q86V86 326 aa11.78□□□□□ -0.52
PDZRN3-203ENST00000462146 CYGBQ8WWM9 190 aa11.78□□□□□ -0.52
PDZRN3-203ENST00000462146 MAML3Q96JK9 1138 aa11.78□□□□□ -0.52
PDZRN3-203ENST00000462146 VAT1Q99536 393 aa11.78□□□□□ -0.52
PDZRN3-203ENST00000462146 EFHD1Q9BUP0 239 aa11.78□□□□□ -0.52
PDZRN3-203ENST00000462146 UPF3AQ9H1J1 476 aaKnown RBP11.78□□□□□ -0.52
PDZRN3-203ENST00000462146 ALG9Q9H6U8 611 aa11.78□□□□□ -0.52
PDZRN3-203ENST00000462146 MRPL40Q9NQ50 206 aaKnown RBP11.78□□□□□ -0.52
PDZRN3-203ENST00000462146 TREX1Q9NSU2 369 aa11.78□□□□□ -0.52
PDZRN3-203ENST00000462146 FAIMQ9NVQ4 179 aa11.78□□□□□ -0.52
PDZRN3-203ENST00000462146 OAZ3Q9UMX2 235 aa11.78□□□□□ -0.52
PDZRN3-203ENST00000462146 A0A0J9YYE9 177 aa11.78□□□□□ -0.52
PDZRN3-203ENST00000462146 SH3PXD2BA1X283 911 aa11.78□□□□□ -0.52
PDZRN3-203ENST00000462146 SUPT7LO94864 414 aa11.78□□□□□ -0.52
PDZRN3-203ENST00000462146 CD4P01730 458 aa11.78□□□□□ -0.52
PDZRN3-203ENST00000462146 MT-ND1P03886 318 aa11.78□□□□□ -0.52
PDZRN3-203ENST00000462146 MTHFD1P11586 935 aaKnown RBP11.78□□□□□ -0.52
PDZRN3-203ENST00000462146 CAPN3P20807 821 aa11.78□□□□□ -0.52
PDZRN3-203ENST00000462146 GPX3P22352 226 aa11.78□□□□□ -0.52
PDZRN3-203ENST00000462146 WARSP23381 471 aaKnown RBP11.78□□□□□ -0.52
PDZRN3-203ENST00000462146 VARSP26640 1264 aaKnown RBP11.78□□□□□ -0.52
PDZRN3-203ENST00000462146 HCAR3P49019 387 aa11.78□□□□□ -0.52
PDZRN3-203ENST00000462146 FOXA1P55317 472 aa11.78□□□□□ -0.52
PDZRN3-203ENST00000462146 MERTKQ12866 999 aa11.78□□□□□ -0.52
PDZRN3-203ENST00000462146 MAP7D1Q3KQU3 841 aa11.78□□□□□ -0.52
PDZRN3-203ENST00000462146 XKR5Q6UX68 686 aa11.78□□□□□ -0.52
PDZRN3-203ENST00000462146 Q6ZNX1 250 aa11.78□□□□□ -0.52
PDZRN3-203ENST00000462146 TMEM26Q6ZUK4 368 aa11.78□□□□□ -0.52
PDZRN3-203ENST00000462146 TAC4Q86UU9 113 aa11.78□□□□□ -0.52
PDZRN3-203ENST00000462146 ARHGAP12Q8IWW6 846 aa11.78□□□□□ -0.52
PDZRN3-203ENST00000462146 CMTR2Q8IYT2 770 aaKnown RBP11.78□□□□□ -0.52
PDZRN3-203ENST00000462146 ZFP42Q96MM3 310 aa11.78□□□□□ -0.52
PDZRN3-203ENST00000462146 PLGRKTQ9HBL7 147 aa11.78□□□□□ -0.52
PDZRN3-203ENST00000462146 ARMC1Q9NVT9 282 aa11.78□□□□□ -0.52
PDZRN3-203ENST00000462146 NEU3Q9UQ49 428 aa11.78□□□□□ -0.52
PDZRN3-203ENST00000462146 A0A087WXM4 84 aa11.77□□□□□ -0.52
PDZRN3-203ENST00000462146 DHRS12A0PJE2 317 aa11.77□□□□□ -0.52
PDZRN3-203ENST00000462146 H3BMQ9 156 aa11.77□□□□□ -0.52
PDZRN3-203ENST00000462146 CACNG3O60359 315 aa11.77□□□□□ -0.52
PDZRN3-203ENST00000462146 SUPT3HO75486 399 aa11.77□□□□□ -0.52
PDZRN3-203ENST00000462146 MYF6P23409 242 aa11.77□□□□□ -0.52
PDZRN3-203ENST00000462146 NAA20P61599 178 aa11.77□□□□□ -0.52
PDZRN3-203ENST00000462146 TNK2Q07912 1038 aa11.77□□□□□ -0.52
PDZRN3-203ENST00000462146 GRB7Q14451 532 aa11.77□□□□□ -0.52
PDZRN3-203ENST00000462146 ARL13BQ3SXY8 428 aa11.77□□□□□ -0.52
PDZRN3-203ENST00000462146 ZBED5Q49AG3 693 aa11.77□□□□□ -0.52
PDZRN3-203ENST00000462146 INTS6LQ5JSJ4 861 aaKnown RBP11.77□□□□□ -0.52
PDZRN3-203ENST00000462146 FGD3Q5JSP0 725 aa11.77□□□□□ -0.52
PDZRN3-203ENST00000462146 GPR158Q5T848 1215 aa11.77□□□□□ -0.52
PDZRN3-203ENST00000462146 PCED1BQ96HM7 432 aa11.77□□□□□ -0.52
PDZRN3-203ENST00000462146 COG8Q96MW5 612 aa11.77□□□□□ -0.52
PDZRN3-203ENST00000462146 KCNA7Q96RP8 456 aa11.77□□□□□ -0.52
PDZRN3-203ENST00000462146 RPF2Q9H7B2 306 aaKnown RBP11.77□□□□□ -0.52
PDZRN3-203ENST00000462146 AKTIPQ9H8T0 292 aa11.77□□□□□ -0.52
PDZRN3-203ENST00000462146 GLOD4Q9HC38 313 aa11.77□□□□□ -0.52
PDZRN3-203ENST00000462146 CCM2LQ9NUG4 571 aaPredicted RBP11.77□□□□□ -0.52
PDZRN3-203ENST00000462146 PLXNB2O15031 1838 aa11.77□□□□□ -0.53
PDZRN3-203ENST00000462146 MEIS3P2A8K0S8 358 aa11.77□□□□□ -0.53
PDZRN3-203ENST00000462146 LTA4HP09960 611 aaKnown RBP11.77□□□□□ -0.53
PDZRN3-203ENST00000462146 ADRA1AP35348 466 aa11.77□□□□□ -0.53
PDZRN3-203ENST00000462146 NUP107P57740 925 aa11.77□□□□□ -0.53
PDZRN3-203ENST00000462146 POU4F1Q01851 419 aa11.77□□□□□ -0.53
PDZRN3-203ENST00000462146 RAB39AQ14964 217 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms