RNA–Protein interactions for RNA: ENST00000448878.6

CHCHD3-203, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

TSL 5 BASIC

Gene CHCHD3, Length 1,038 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-203ENST00000448878 SCN8AQ9UQD0 1980 aa18.13■□□□□ 0.49
CHCHD3-203ENST00000448878 RHPN2P1A8MT19 583 aa18.12■□□□□ 0.49
CHCHD3-203ENST00000448878 RASA4BC9J798 803 aa18.12■□□□□ 0.49
CHCHD3-203ENST00000448878 TEX33O43247 280 aa18.12■□□□□ 0.49
CHCHD3-203ENST00000448878 RASA4O43374 803 aa18.12■□□□□ 0.49
CHCHD3-203ENST00000448878 CREB3O43889 395 aa18.12■□□□□ 0.49
CHCHD3-203ENST00000448878 GADD45BO75293 160 aaPredicted RBP18.12■□□□□ 0.49
CHCHD3-203ENST00000448878 KELP23276 732 aa18.12■□□□□ 0.49
CHCHD3-203ENST00000448878 PPM1FP49593 454 aaPredicted RBP18.12■□□□□ 0.49
CHCHD3-203ENST00000448878 OR1D5P58170 312 aa18.12■□□□□ 0.49
CHCHD3-203ENST00000448878 HLTFQ14527 1009 aaKnown RBP eCLIP18.12■□□□□ 0.49
CHCHD3-203ENST00000448878 GRM3Q14832 879 aa18.12■□□□□ 0.49
CHCHD3-203ENST00000448878 CYTH1Q15438 398 aa18.12■□□□□ 0.49
CHCHD3-203ENST00000448878 SKIDA1Q1XH10 827 aa18.12■□□□□ 0.49
CHCHD3-203ENST00000448878 BORAQ6PGQ7 559 aa18.12■□□□□ 0.49
CHCHD3-203ENST00000448878 STRADAQ7RTN6 431 aa18.12■□□□□ 0.49
CHCHD3-203ENST00000448878 SLFN11Q7Z7L1 901 aa18.12■□□□□ 0.49
CHCHD3-203ENST00000448878 SLITRK4Q8IW52 837 aa18.12■□□□□ 0.49
CHCHD3-203ENST00000448878 RTL3Q8N8U3 475 aaKnown RBP18.12■□□□□ 0.49
CHCHD3-203ENST00000448878 SLC30A5Q8TAD4 765 aa18.12■□□□□ 0.49
CHCHD3-203ENST00000448878 KIAA1524Q8TCG1 905 aa18.12■□□□□ 0.49
CHCHD3-203ENST00000448878 HCAR2Q8TDS4 363 aa18.12■□□□□ 0.49
CHCHD3-203ENST00000448878 FUBP1Q96AE4 644 aaKnown RBP18.12■□□□□ 0.49
CHCHD3-203ENST00000448878 C11orf70Q9BRQ4 267 aa18.12■□□□□ 0.49
CHCHD3-203ENST00000448878 FUCA2Q9BTY2 467 aa18.12■□□□□ 0.49
CHCHD3-203ENST00000448878 FGF22Q9HCT0 170 aa18.12■□□□□ 0.49
CHCHD3-203ENST00000448878 ANKMY1Q9P2S6 941 aa18.12■□□□□ 0.49
CHCHD3-203ENST00000448878 LHX3Q9UBR4 397 aa18.12■□□□□ 0.49
CHCHD3-203ENST00000448878 UBA2Q9UBT2 640 aaPredicted RBP18.12■□□□□ 0.49
CHCHD3-203ENST00000448878 A8MX80 341 aa18.11■□□□□ 0.49
CHCHD3-203ENST00000448878 B4GAT1O43505 415 aa18.11■□□□□ 0.49
CHCHD3-203ENST00000448878 NUDT21O43809 227 aaKnown RBP18.11■□□□□ 0.49
CHCHD3-203ENST00000448878 RECQL5O94762 991 aaPredicted RBP18.11■□□□□ 0.49
CHCHD3-203ENST00000448878 CPNE6O95741 557 aa18.11■□□□□ 0.49
CHCHD3-203ENST00000448878 MAZP56270 477 aaKnown RBP18.11■□□□□ 0.49
CHCHD3-203ENST00000448878 YBEYP58557 167 aaPredicted RBP18.11■□□□□ 0.49
CHCHD3-203ENST00000448878 UBAP2LQ14157 1087 aaKnown RBP18.11■□□□□ 0.49
CHCHD3-203ENST00000448878 KLHDC7AQ5VTJ3 777 aa18.11■□□□□ 0.49
CHCHD3-203ENST00000448878 CAMK1DQ8IU85 385 aa18.11■□□□□ 0.49
CHCHD3-203ENST00000448878 FAM114A1Q8IWE2 563 aa18.11■□□□□ 0.49
CHCHD3-203ENST00000448878 TAAR9Q96RI9 348 aa18.11■□□□□ 0.49
CHCHD3-203ENST00000448878 TUBGCP2Q9BSJ2 902 aa18.11■□□□□ 0.49
CHCHD3-203ENST00000448878 NOL6Q9H6R4 1146 aaKnown RBP18.11■□□□□ 0.49
CHCHD3-203ENST00000448878 NEU3Q9UQ49 428 aa18.11■□□□□ 0.49
CHCHD3-203ENST00000448878 ATP8A1Q9Y2Q0 1164 aa18.11■□□□□ 0.49
CHCHD3-203ENST00000448878 UNC13CQ8NB66 2214 aa18.11■□□□□ 0.49
CHCHD3-203ENST00000448878 LRRK1Q38SD2 2015 aa18.1■□□□□ 0.49
CHCHD3-203ENST00000448878 ANKRD36A6QL64 1941 aa18.1■□□□□ 0.49
CHCHD3-203ENST00000448878 LRP4O75096 1905 aa18.1■□□□□ 0.49
CHCHD3-203ENST00000448878 C2CD4BA6NLJ0 364 aa18.1■□□□□ 0.49
CHCHD3-203ENST00000448878 ZW10O43264 779 aa18.1■□□□□ 0.49
CHCHD3-203ENST00000448878 ELFN1P0C7U0 828 aa18.1■□□□□ 0.49
CHCHD3-203ENST00000448878 KRT3P12035 628 aa18.1■□□□□ 0.49
CHCHD3-203ENST00000448878 HDAC4P56524 1084 aa18.1■□□□□ 0.49
CHCHD3-203ENST00000448878 B4GALNT1Q00973 533 aa18.1■□□□□ 0.49
CHCHD3-203ENST00000448878 KCNAB2Q13303 367 aa18.1■□□□□ 0.49
CHCHD3-203ENST00000448878 SERINC3Q13530 473 aa18.1■□□□□ 0.49
CHCHD3-203ENST00000448878 EFHC2Q5JST6 749 aa18.1■□□□□ 0.49
CHCHD3-203ENST00000448878 BRAT1Q6PJG6 821 aa18.1■□□□□ 0.49
CHCHD3-203ENST00000448878 LURAP1LQ8IV03 231 aa18.1■□□□□ 0.49
CHCHD3-203ENST00000448878 ZNF564Q8TBZ8 553 aaPredicted RBP18.1■□□□□ 0.49
CHCHD3-203ENST00000448878 SLC20A1Q8WUM9 679 aa18.1■□□□□ 0.49
CHCHD3-203ENST00000448878 NKD1Q969G9 470 aa18.1■□□□□ 0.49
CHCHD3-203ENST00000448878 ZNF641Q96N77 438 aaPredicted RBP18.1■□□□□ 0.49
CHCHD3-203ENST00000448878 NUDT22Q9BRQ3 303 aa18.1■□□□□ 0.49
CHCHD3-203ENST00000448878 SELENOOQ9BVL4 669 aa18.1■□□□□ 0.49
CHCHD3-203ENST00000448878 ZMYND15Q9H091 742 aa18.1■□□□□ 0.49
CHCHD3-203ENST00000448878 ADNPQ9H2P0 1102 aa18.1■□□□□ 0.49
CHCHD3-203ENST00000448878 CATSPERBQ9H7T0 1116 aa18.1■□□□□ 0.49
CHCHD3-203ENST00000448878 KIAA1468Q9P260 1216 aa18.1■□□□□ 0.49
CHCHD3-203ENST00000448878 COL12A1Q99715 3063 aa18.09■□□□□ 0.49
CHCHD3-203ENST00000448878 BUB1BO60566 1050 aaPredicted RBP18.09■□□□□ 0.49
CHCHD3-203ENST00000448878 GFPT2O94808 682 aa18.09■□□□□ 0.49
CHCHD3-203ENST00000448878 UCHL3P15374 230 aa18.09■□□□□ 0.49
CHCHD3-203ENST00000448878 MMP12P39900 470 aa18.09■□□□□ 0.49
CHCHD3-203ENST00000448878 PTPN9P43378 593 aa18.09■□□□□ 0.49
CHCHD3-203ENST00000448878 CCR10P46092 362 aa18.09■□□□□ 0.49
CHCHD3-203ENST00000448878 POLE2P56282 527 aa18.09■□□□□ 0.49
CHCHD3-203ENST00000448878 KIAA1024LP59773 190 aa18.09■□□□□ 0.49
CHCHD3-203ENST00000448878 ACOX1Q15067 660 aa18.09■□□□□ 0.49
CHCHD3-203ENST00000448878 AGERQ15109 404 aa18.09■□□□□ 0.49
CHCHD3-203ENST00000448878 IGFBP7Q16270 282 aa18.09■□□□□ 0.49
CHCHD3-203ENST00000448878 PARP15Q460N3 678 aa18.09■□□□□ 0.49
CHCHD3-203ENST00000448878 EPS8L1Q8TE68 723 aa18.09■□□□□ 0.49
CHCHD3-203ENST00000448878 ZDHHC1Q8WTX9 485 aa18.09■□□□□ 0.49
CHCHD3-203ENST00000448878 LGR4Q9BXB1 951 aa18.09■□□□□ 0.49
CHCHD3-203ENST00000448878 SLC12A9Q9BXP2 914 aa18.09■□□□□ 0.49
CHCHD3-203ENST00000448878 EPN3Q9H201 632 aa18.09■□□□□ 0.49
CHCHD3-203ENST00000448878 WDR26Q9H7D7 661 aa18.09■□□□□ 0.49
CHCHD3-203ENST00000448878 CARS2Q9HA77 564 aaKnown RBP18.09■□□□□ 0.49
CHCHD3-203ENST00000448878 SPATS2LQ9NUQ6 558 aaKnown RBP18.09■□□□□ 0.49
CHCHD3-203ENST00000448878 PRSS38A1L453 326 aa18.08■□□□□ 0.48
CHCHD3-203ENST00000448878 J3KR12 359 aa18.08■□□□□ 0.48
CHCHD3-203ENST00000448878 PDE2AO00408 941 aaPredicted RBP18.08■□□□□ 0.48
CHCHD3-203ENST00000448878 TNFRSF10CO14798 259 aa18.08■□□□□ 0.48
CHCHD3-203ENST00000448878 NTRK1P04629 796 aa18.08■□□□□ 0.48
CHCHD3-203ENST00000448878 FGF3P11487 239 aaPredicted RBP18.08■□□□□ 0.48
CHCHD3-203ENST00000448878 GPD1P21695 349 aa18.08■□□□□ 0.48
CHCHD3-203ENST00000448878 MMP8P22894 467 aa18.08■□□□□ 0.48
CHCHD3-203ENST00000448878 MPSTP25325 297 aa18.08■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms