RNA–Protein interactions for RNA: ENST00000330334.7

HDDC3-201, Transcript of HD domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene HDDC3, Length 1,047 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-201ENST00000330334 NSMCE3Q96MG7 304 aa17.84■□□□□ 0.45
HDDC3-201ENST00000330334 DEPDC7Q96QD5 511 aa17.84■□□□□ 0.45
HDDC3-201ENST00000330334 NUDCD1Q96RS6 583 aa17.84■□□□□ 0.45
HDDC3-201ENST00000330334 MGME1Q9BQP7 344 aa17.84■□□□□ 0.45
HDDC3-201ENST00000330334 CLPBQ9H078 707 aa17.84■□□□□ 0.45
HDDC3-201ENST00000330334 TCEAL2Q9H3H9 227 aaPredicted RBP17.84■□□□□ 0.45
HDDC3-201ENST00000330334 KCTD5Q9NXV2 234 aa17.84■□□□□ 0.45
HDDC3-201ENST00000330334 LCMT1Q9UIC8 334 aa17.84■□□□□ 0.45
HDDC3-201ENST00000330334 DGKBQ9Y6T7 804 aa17.84■□□□□ 0.45
HDDC3-201ENST00000330334 YY2O15391 372 aa17.83■□□□□ 0.44
HDDC3-201ENST00000330334 RECQL5O94762 991 aaPredicted RBP17.83■□□□□ 0.44
HDDC3-201ENST00000330334 RASGRP1O95267 797 aa17.83■□□□□ 0.44
HDDC3-201ENST00000330334 ALPIP09923 528 aa17.83■□□□□ 0.44
HDDC3-201ENST00000330334 MYF5P13349 255 aa17.83■□□□□ 0.44
HDDC3-201ENST00000330334 CASP14P31944 242 aa17.83■□□□□ 0.44
HDDC3-201ENST00000330334 TRIM23P36406 574 aa17.83■□□□□ 0.44
HDDC3-201ENST00000330334 ZNF235Q14590 738 aa17.83■□□□□ 0.44
HDDC3-201ENST00000330334 CDKN3Q16667 212 aa17.83■□□□□ 0.44
HDDC3-201ENST00000330334 HADHQ16836 314 aaKnown RBP17.83■□□□□ 0.44
HDDC3-201ENST00000330334 COL28A1Q2UY09 1125 aa17.83■□□□□ 0.44
HDDC3-201ENST00000330334 SKOR2Q2VWA4 1001 aaPredicted RBP17.83■□□□□ 0.44
HDDC3-201ENST00000330334 C19orf48Q6RUI8 117 aa17.83■□□□□ 0.44
HDDC3-201ENST00000330334 SNIP1Q8TAD8 396 aaKnown RBP17.83■□□□□ 0.44
HDDC3-201ENST00000330334 WDR48Q8TAF3 677 aa17.83■□□□□ 0.44
HDDC3-201ENST00000330334 MAPK15Q8TD08 544 aa17.83■□□□□ 0.44
HDDC3-201ENST00000330334 NSMCE1Q8WV22 266 aa17.83■□□□□ 0.44
HDDC3-201ENST00000330334 HNRNPLLQ8WVV9 542 aaKnown RBP17.83■□□□□ 0.44
HDDC3-201ENST00000330334 SCG3Q8WXD2 468 aaKnown RBP17.83■□□□□ 0.44
HDDC3-201ENST00000330334 NAT6Q93015 286 aa17.83■□□□□ 0.44
HDDC3-201ENST00000330334 BTBD6Q96KE9 485 aa17.83■□□□□ 0.44
HDDC3-201ENST00000330334 UVRAGQ9P2Y5 699 aa17.83■□□□□ 0.44
HDDC3-201ENST00000330334 ADAMTS20P59510 1910 aa17.82■□□□□ 0.44
HDDC3-201ENST00000330334 TNFRSF10CO14798 259 aa17.82■□□□□ 0.44
HDDC3-201ENST00000330334 ELFN1P0C7U0 828 aa17.82■□□□□ 0.44
HDDC3-201ENST00000330334 NFKBIAP25963 317 aa17.82■□□□□ 0.44
HDDC3-201ENST00000330334 EIF2S3P41091 472 aaKnown RBP17.82■□□□□ 0.44
HDDC3-201ENST00000330334 ARSEP51690 589 aa17.82■□□□□ 0.44
HDDC3-201ENST00000330334 SRP54P61011 504 aaKnown RBP17.82■□□□□ 0.44
HDDC3-201ENST00000330334 SEMG2Q02383 582 aa17.82■□□□□ 0.44
HDDC3-201ENST00000330334 C1orf61Q13536 156 aa17.82■□□□□ 0.44
HDDC3-201ENST00000330334 ALG11Q2TAA5 492 aa17.82■□□□□ 0.44
HDDC3-201ENST00000330334 MARC1Q5VT66 337 aa17.82■□□□□ 0.44
HDDC3-201ENST00000330334 ESRP1Q6NXG1 681 aaKnown RBP17.82■□□□□ 0.44
HDDC3-201ENST00000330334 GUSBP11Q6P575 273 aa17.82■□□□□ 0.44
HDDC3-201ENST00000330334 ENPP7Q6UWV6 458 aa17.82■□□□□ 0.44
HDDC3-201ENST00000330334 EFL1Q7Z2Z2 1120 aaKnown RBP17.82■□□□□ 0.44
HDDC3-201ENST00000330334 LSMEM2Q8N112 164 aa17.82■□□□□ 0.44
HDDC3-201ENST00000330334 CBARPQ8N350 705 aaPredicted RBP17.82■□□□□ 0.44
HDDC3-201ENST00000330334 PGBD5Q8N414 524 aa17.82■□□□□ 0.44
HDDC3-201ENST00000330334 ATPAF2Q8N5M1 289 aa17.82■□□□□ 0.44
HDDC3-201ENST00000330334 TEX26Q8N6G2 289 aa17.82■□□□□ 0.44
HDDC3-201ENST00000330334 FGF11Q92914 225 aa17.82■□□□□ 0.44
HDDC3-201ENST00000330334 WDR92Q96MX6 357 aa17.82■□□□□ 0.44
HDDC3-201ENST00000330334 OR1A2Q9Y585 309 aa17.82■□□□□ 0.44
HDDC3-201ENST00000330334 MYLKQ15746 1914 aa17.81■□□□□ 0.44
HDDC3-201ENST00000330334 CPED1A4D0V7 1026 aa17.81■□□□□ 0.44
HDDC3-201ENST00000330334 TCEA3O75764 348 aa17.81■□□□□ 0.44
HDDC3-201ENST00000330334 DXOO77932 396 aaKnown RBP17.81■□□□□ 0.44
HDDC3-201ENST00000330334 PRKCGP05129 697 aa17.81■□□□□ 0.44
HDDC3-201ENST00000330334 CTSEP14091 401 aa17.81■□□□□ 0.44
HDDC3-201ENST00000330334 ACTN2P35609 894 aa17.81■□□□□ 0.44
HDDC3-201ENST00000330334 KIAA1024LP59773 190 aa17.81■□□□□ 0.44
HDDC3-201ENST00000330334 KRT81Q14533 505 aa17.81■□□□□ 0.44
HDDC3-201ENST00000330334 SLC18A3Q16572 532 aa17.81■□□□□ 0.44
HDDC3-201ENST00000330334 PDZD3Q86UT5 571 aa17.81■□□□□ 0.44
HDDC3-201ENST00000330334 HID1Q8IV36 788 aa17.81■□□□□ 0.44
HDDC3-201ENST00000330334 SLC35F3Q8IY50 421 aa17.81■□□□□ 0.44
HDDC3-201ENST00000330334 OR8K1Q8NGG5 319 aa17.81■□□□□ 0.44
HDDC3-201ENST00000330334 ZNF564Q8TBZ8 553 aaPredicted RBP17.81■□□□□ 0.44
HDDC3-201ENST00000330334 FATE1Q969F0 183 aa17.81■□□□□ 0.44
HDDC3-201ENST00000330334 TSACCQ96A04 125 aaPredicted RBP17.81■□□□□ 0.44
HDDC3-201ENST00000330334 RBM15Q96T37 977 aaKnown RBP eCLIP17.81■□□□□ 0.44
HDDC3-201ENST00000330334 DNAJC7Q99615 494 aa17.81■□□□□ 0.44
HDDC3-201ENST00000330334 XPO4Q9C0E2 1151 aaKnown RBP17.81■□□□□ 0.44
HDDC3-201ENST00000330334 NOD2Q9HC29 1040 aa17.81■□□□□ 0.44
HDDC3-201ENST00000330334 KLQ9UEF7 1012 aa17.81■□□□□ 0.44
HDDC3-201ENST00000330334 PHTF1Q9UMS5 762 aa17.81■□□□□ 0.44
HDDC3-201ENST00000330334 PPIL1Q9Y3C6 166 aa17.81■□□□□ 0.44
HDDC3-201ENST00000330334 ASXL3Q9C0F0 2248 aa17.81■□□□□ 0.44
HDDC3-201ENST00000330334 LOC400499M0QZD8 3231 aa17.81■□□□□ 0.44
HDDC3-201ENST00000330334 IGSF10Q6WRI0 2623 aa17.8■□□□□ 0.44
HDDC3-201ENST00000330334 CACNB4O00305 520 aaPredicted RBP17.8■□□□□ 0.44
HDDC3-201ENST00000330334 PDE2AO00408 941 aaPredicted RBP17.8■□□□□ 0.44
HDDC3-201ENST00000330334 RRP8O43159 456 aaKnown RBP17.8■□□□□ 0.44
HDDC3-201ENST00000330334 TLX3O43711 291 aaPredicted RBP17.8■□□□□ 0.44
HDDC3-201ENST00000330334 BRINP1O60477 761 aa17.8■□□□□ 0.44
HDDC3-201ENST00000330334 CSO75390 466 aaKnown RBP17.8■□□□□ 0.44
HDDC3-201ENST00000330334 PROSCO94903 275 aa17.8■□□□□ 0.44
HDDC3-201ENST00000330334 TNFP01375 233 aa17.8■□□□□ 0.44
HDDC3-201ENST00000330334 PCCBP05166 539 aa17.8■□□□□ 0.44
HDDC3-201ENST00000330334 H2AFZP0C0S5 128 aa17.8■□□□□ 0.44
HDDC3-201ENST00000330334 GM2AP17900 193 aa17.8■□□□□ 0.44
HDDC3-201ENST00000330334 TGM2P21980 687 aa17.8■□□□□ 0.44
HDDC3-201ENST00000330334 CES1P23141 567 aa17.8■□□□□ 0.44
HDDC3-201ENST00000330334 KELP23276 732 aa17.8■□□□□ 0.44
HDDC3-201ENST00000330334 MMP13P45452 471 aa17.8■□□□□ 0.44
HDDC3-201ENST00000330334 LSSP48449 732 aa17.8■□□□□ 0.44
HDDC3-201ENST00000330334 TRIM14Q14142 442 aa17.8■□□□□ 0.44
HDDC3-201ENST00000330334 PAFAH1B3Q15102 231 aaKnown RBP17.8■□□□□ 0.44
HDDC3-201ENST00000330334 PDK2Q15119 407 aa17.8■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms