RNA–Protein interactions for RNA: ENST00000278833.3

ROM1-201, Transcript of retinal outer segment membrane protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene ROM1, Length 1,878 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ROM1-201ENST00000278833 SPPL2BQ8TCT7 592 aa25.17■■□□□ 1.62
ROM1-201ENST00000278833 BTN2A3PQ96KV6 586 aa25.17■■□□□ 1.62
ROM1-201ENST00000278833 POPDC3Q9HBV1 291 aa25.17■■□□□ 1.62
ROM1-201ENST00000278833 NT5MQ9NPB1 228 aa25.17■■□□□ 1.62
ROM1-201ENST00000278833 SUCOQ9UBS9 1254 aaKnown RBP25.17■■□□□ 1.62
ROM1-201ENST00000278833 DTNAQ9Y4J8 743 aa25.17■■□□□ 1.62
ROM1-201ENST00000278833 PRSS51A0A1B0GVH4 220 aa25.17■■□□□ 1.62
ROM1-201ENST00000278833 XRCC1P18887 633 aaPredicted RBP25.17■■□□□ 1.62
ROM1-201ENST00000278833 ALDH1A3P47895 512 aa25.17■■□□□ 1.62
ROM1-201ENST00000278833 ART3Q13508 389 aa25.17■■□□□ 1.62
ROM1-201ENST00000278833 PARP15Q460N3 678 aa25.17■■□□□ 1.62
ROM1-201ENST00000278833 RNF220Q5VTB9 566 aa25.17■■□□□ 1.62
ROM1-201ENST00000278833 SCN4BQ8IWT1 228 aa25.17■■□□□ 1.62
ROM1-201ENST00000278833 ST13P4Q8IZP2 240 aaPredicted RBP25.17■■□□□ 1.62
ROM1-201ENST00000278833 ADCY4Q8NFM4 1077 aa25.17■■□□□ 1.62
ROM1-201ENST00000278833 ZFAND2BQ8WV99 257 aa25.17■■□□□ 1.62
ROM1-201ENST00000278833 SP110Q9HB58 689 aa25.17■■□□□ 1.62
ROM1-201ENST00000278833 ANKRD36A6QL64 1941 aa25.16■■□□□ 1.62
ROM1-201ENST00000278833 MOXD2PA6NHM9 499 aa25.16■■□□□ 1.62
ROM1-201ENST00000278833 TRIM38O00635 465 aa25.16■■□□□ 1.62
ROM1-201ENST00000278833 ACOT8O14734 319 aa25.16■■□□□ 1.62
ROM1-201ENST00000278833 SYN3O14994 580 aa25.16■■□□□ 1.62
ROM1-201ENST00000278833 ASGR1P07306 291 aa25.16■■□□□ 1.62
ROM1-201ENST00000278833 ATXN1LP0C7T5 689 aaKnown RBP25.16■■□□□ 1.62
ROM1-201ENST00000278833 CD86P42081 329 aa25.16■■□□□ 1.62
ROM1-201ENST00000278833 SUOXP51687 545 aa25.16■■□□□ 1.62
ROM1-201ENST00000278833 SLC10A7Q0GE19 358 aa25.16■■□□□ 1.62
ROM1-201ENST00000278833 STX5Q13190 355 aa25.16■■□□□ 1.62
ROM1-201ENST00000278833 PCSK7Q16549 785 aa25.16■■□□□ 1.62
ROM1-201ENST00000278833 RARS2Q5T160 578 aaKnown RBP25.16■■□□□ 1.62
ROM1-201ENST00000278833 GLB1LQ6UWU2 654 aa25.16■■□□□ 1.62
ROM1-201ENST00000278833 HACD2Q6Y1H2 254 aa25.16■■□□□ 1.62
ROM1-201ENST00000278833 CUZD1Q86UP6 607 aa25.16■■□□□ 1.62
ROM1-201ENST00000278833 MARVELD2Q8N4S9 558 aa25.16■■□□□ 1.62
ROM1-201ENST00000278833 EFCAB3Q8N7B9 438 aa25.16■■□□□ 1.62
ROM1-201ENST00000278833 ICA1LQ8NDH6 482 aa25.16■■□□□ 1.62
ROM1-201ENST00000278833 ATXN3LQ9H3M9 355 aa25.16■■□□□ 1.62
ROM1-201ENST00000278833 ACSS2Q9NR19 701 aa25.16■■□□□ 1.62
ROM1-201ENST00000278833 COMMD8Q9NX08 183 aa25.16■■□□□ 1.62
ROM1-201ENST00000278833 GTSE1Q9NYZ3 720 aa25.16■■□□□ 1.62
ROM1-201ENST00000278833 VWA7Q9Y334 891 aa25.16■■□□□ 1.62
ROM1-201ENST00000278833 TMEM233B4DJY2 109 aa25.15■■□□□ 1.62
ROM1-201ENST00000278833 MAP3K13O43283 966 aa25.15■■□□□ 1.62
ROM1-201ENST00000278833 S1PR4O95977 384 aa25.15■■□□□ 1.62
ROM1-201ENST00000278833 IMPDH1P20839 514 aa25.15■■□□□ 1.62
ROM1-201ENST00000278833 DPP6P42658 865 aa25.15■■□□□ 1.62
ROM1-201ENST00000278833 YBEYP58557 167 aaPredicted RBP25.15■■□□□ 1.62
ROM1-201ENST00000278833 ZNF789Q5FWF6 425 aa25.15■■□□□ 1.62
ROM1-201ENST00000278833 IRAK1BP1Q5VVH5 260 aa25.15■■□□□ 1.62
ROM1-201ENST00000278833 RNF180Q86T96 592 aa25.15■■□□□ 1.62
ROM1-201ENST00000278833 COLGALT2Q8IYK4 626 aa25.15■■□□□ 1.62
ROM1-201ENST00000278833 FEM1CQ96JP0 617 aa25.15■■□□□ 1.62
ROM1-201ENST00000278833 GBP5Q96PP8 586 aa25.15■■□□□ 1.62
ROM1-201ENST00000278833 GSTO2Q9H4Y5 243 aa25.15■■□□□ 1.62
ROM1-201ENST00000278833 ABI2Q9NYB9 513 aaPredicted RBP25.15■■□□□ 1.62
ROM1-201ENST00000278833 RAB26Q9ULW5 256 aa25.15■■□□□ 1.62
ROM1-201ENST00000278833 CHD5Q8TDI0 1954 aa25.15■■□□□ 1.62
ROM1-201ENST00000278833 F8W810 466 aa25.15■■□□□ 1.62
ROM1-201ENST00000278833 J3KR12 359 aa25.15■■□□□ 1.62
ROM1-201ENST00000278833 SMIM24O75264 130 aa25.15■■□□□ 1.62
ROM1-201ENST00000278833 EPOP01588 193 aa25.15■■□□□ 1.62
ROM1-201ENST00000278833 OR4Q2P0C623 313 aa25.15■■□□□ 1.62
ROM1-201ENST00000278833 HAPLN1P10915 354 aaPredicted RBP25.15■■□□□ 1.62
ROM1-201ENST00000278833 MAPKAPK2P49137 400 aa25.15■■□□□ 1.62
ROM1-201ENST00000278833 MNX1P50219 401 aaPredicted RBP25.15■■□□□ 1.62
ROM1-201ENST00000278833 NOMO2Q5JPE7 1267 aa25.15■■□□□ 1.62
ROM1-201ENST00000278833 ALG1LQ6GMV1 187 aa25.15■■□□□ 1.62
ROM1-201ENST00000278833 HIPK4Q8NE63 616 aa25.15■■□□□ 1.62
ROM1-201ENST00000278833 ASB2Q96Q27 587 aa25.15■■□□□ 1.62
ROM1-201ENST00000278833 NDNQ99608 321 aa25.15■■□□□ 1.62
ROM1-201ENST00000278833 RETREG1Q9H6L5 497 aa25.15■■□□□ 1.62
ROM1-201ENST00000278833 PCDHB5Q9Y5E4 795 aa25.15■■□□□ 1.62
ROM1-201ENST00000278833 B4GALT3O60512 393 aa25.14■■□□□ 1.61
ROM1-201ENST00000278833 CCDC166P0CW27 439 aa25.14■■□□□ 1.61
ROM1-201ENST00000278833 HLA-DPA1P20036 260 aa25.14■■□□□ 1.61
ROM1-201ENST00000278833 KCNA5P22460 613 aa25.14■■□□□ 1.61
ROM1-201ENST00000278833 FDXRP22570 491 aa25.14■■□□□ 1.61
ROM1-201ENST00000278833 DSC2Q02487 901 aa25.14■■□□□ 1.61
ROM1-201ENST00000278833 RING1Q06587 406 aa25.14■■□□□ 1.61
ROM1-201ENST00000278833 ALFQ53S48 1182 aa25.14■■□□□ 1.61
ROM1-201ENST00000278833 SIRPB2Q5JXA9 342 aa25.14■■□□□ 1.61
ROM1-201ENST00000278833 SPATA6LQ8N4H0 392 aa25.14■■□□□ 1.61
ROM1-201ENST00000278833 ASB9Q96DX5 294 aa25.14■■□□□ 1.61
ROM1-201ENST00000278833 PPP1R36Q96LQ0 422 aa25.14■■□□□ 1.61
ROM1-201ENST00000278833 GMIPQ9P107 970 aa25.14■■□□□ 1.61
ROM1-201ENST00000278833 NUDT5Q9UKK9 219 aa25.14■■□□□ 1.61
ROM1-201ENST00000278833 CNOT11Q9UKZ1 510 aaKnown RBP25.14■■□□□ 1.61
ROM1-201ENST00000278833 NEMP2A6NFY4 417 aa25.13■■□□□ 1.61
ROM1-201ENST00000278833 LDB2O43679 373 aa25.13■■□□□ 1.61
ROM1-201ENST00000278833 UPP2O95045 317 aa25.13■■□□□ 1.61
ROM1-201ENST00000278833 FGF1P05230 155 aa25.13■■□□□ 1.61
ROM1-201ENST00000278833 ENO3P13929 434 aaPredicted RBP25.13■■□□□ 1.61
ROM1-201ENST00000278833 PBX3P40426 434 aa25.13■■□□□ 1.61
ROM1-201ENST00000278833 FAM189BP81408 668 aa25.13■■□□□ 1.61
ROM1-201ENST00000278833 IHHQ14623 411 aa25.13■■□□□ 1.61
ROM1-201ENST00000278833 HMGCLL1Q8TB92 370 aa25.13■■□□□ 1.61
ROM1-201ENST00000278833 DUS3LQ96G46 650 aaKnown RBP25.13■■□□□ 1.61
ROM1-201ENST00000278833 DCUN1D1Q96GG9 259 aa25.13■■□□□ 1.61
ROM1-201ENST00000278833 MRPL1Q9BYD6 325 aaKnown RBP25.13■■□□□ 1.61
ROM1-201ENST00000278833 Q9H521 79 aa25.13■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms