RNA–Protein interactions for RNA: ENST00000638029.1

CACNA1A-258, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 7,814 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-258ENST00000638029 MEA1Q16626 185 aa16.42■□□□□ 0.22
CACNA1A-258ENST00000638029 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP16.42■□□□□ 0.22
CACNA1A-258ENST00000638029 C3orf67Q6ZVT6 689 aa16.42■□□□□ 0.22
CACNA1A-258ENST00000638029 OR4A15Q8NGL6 344 aa16.42■□□□□ 0.22
CACNA1A-258ENST00000638029 RP9Q8TA86 221 aaKnown RBP16.42■□□□□ 0.22
CACNA1A-258ENST00000638029 DEFB118Q96PH6 123 aa16.42■□□□□ 0.22
CACNA1A-258ENST00000638029 ZC3H13Q5T200 1668 aaKnown RBP16.42■□□□□ 0.22
CACNA1A-258ENST00000638029 TNFAIP8O95379 198 aa16.42■□□□□ 0.22
CACNA1A-258ENST00000638029 BNIP1Q12981 228 aa16.42■□□□□ 0.22
CACNA1A-258ENST00000638029 PFKFB4Q16877 469 aa16.42■□□□□ 0.22
CACNA1A-258ENST00000638029 RXFP2Q8WXD0 754 aa16.42■□□□□ 0.22
CACNA1A-258ENST00000638029 KLK6Q92876 244 aa16.42■□□□□ 0.22
CACNA1A-258ENST00000638029 TKTL2Q9H0I9 626 aa16.42■□□□□ 0.22
CACNA1A-258ENST00000638029 SMURF1Q9HCE7 757 aa16.42■□□□□ 0.22
CACNA1A-258ENST00000638029 ELK3P41970 407 aa16.41■□□□□ 0.22
CACNA1A-258ENST00000638029 MAPK7Q13164 816 aa16.41■□□□□ 0.22
CACNA1A-258ENST00000638029 SELENOMQ8WWX9 145 aa16.41■□□□□ 0.22
CACNA1A-258ENST00000638029 TAS2R13Q9NYV9 303 aa16.41■□□□□ 0.22
CACNA1A-258ENST00000638029 USP20Q9Y2K6 914 aa16.41■□□□□ 0.22
CACNA1A-258ENST00000638029 PER3P56645 1201 aa16.41■□□□□ 0.22
CACNA1A-258ENST00000638029 BACE1P56817 501 aa16.41■□□□□ 0.22
CACNA1A-258ENST00000638029 USP46P62068 366 aa16.41■□□□□ 0.22
CACNA1A-258ENST00000638029 IL18Q14116 193 aa16.41■□□□□ 0.22
CACNA1A-258ENST00000638029 RETSATQ6NUM9 610 aa16.41■□□□□ 0.22
CACNA1A-258ENST00000638029 AKT1S1Q96B36 256 aa16.41■□□□□ 0.22
CACNA1A-258ENST00000638029 WRAP53Q9BUR4 548 aaKnown RBP16.41■□□□□ 0.22
CACNA1A-258ENST00000638029 CNOT6Q9ULM6 557 aaKnown RBP16.41■□□□□ 0.22
CACNA1A-258ENST00000638029 ING4Q9UNL4 249 aa16.41■□□□□ 0.22
CACNA1A-258ENST00000638029 GCATO75600 419 aa16.41■□□□□ 0.22
CACNA1A-258ENST00000638029 MICAL2O94851 1124 aa16.41■□□□□ 0.22
CACNA1A-258ENST00000638029 SLC30A6Q6NXT4 461 aa16.41■□□□□ 0.22
CACNA1A-258ENST00000638029 B3GNT6Q6ZMB0 384 aa16.41■□□□□ 0.22
CACNA1A-258ENST00000638029 SLC38A2Q96QD8 506 aa16.41■□□□□ 0.22
CACNA1A-258ENST00000638029 FOXN3O00409 490 aaPredicted RBP16.41■□□□□ 0.22
CACNA1A-258ENST00000638029 SLC37A4O43826 429 aa16.41■□□□□ 0.22
CACNA1A-258ENST00000638029 OR10H3O60404 316 aa16.41■□□□□ 0.22
CACNA1A-258ENST00000638029 CALB2P22676 271 aa16.41■□□□□ 0.22
CACNA1A-258ENST00000638029 FBXO47Q5MNV8 452 aa16.41■□□□□ 0.22
CACNA1A-258ENST00000638029 CXCL17Q6UXB2 119 aa16.41■□□□□ 0.22
CACNA1A-258ENST00000638029 ERO1BQ86YB8 467 aa16.41■□□□□ 0.22
CACNA1A-258ENST00000638029 PHYKPLQ8IUZ5 450 aa16.41■□□□□ 0.22
CACNA1A-258ENST00000638029 ZNF558Q96NG5 402 aa16.41■□□□□ 0.22
CACNA1A-258ENST00000638029 CHIAQ9BZP6 476 aa16.41■□□□□ 0.22
CACNA1A-258ENST00000638029 POU2F3Q9UKI9 436 aa16.41■□□□□ 0.22
CACNA1A-258ENST00000638029 PRLP01236 227 aa16.41■□□□□ 0.22
CACNA1A-258ENST00000638029 NBPF12Q5TAG4 269 aaPredicted RBP16.41■□□□□ 0.22
CACNA1A-258ENST00000638029 OFCC1Q8IZS5 231 aa16.41■□□□□ 0.22
CACNA1A-258ENST00000638029 MEIOBQ8N635 442 aa16.41■□□□□ 0.22
CACNA1A-258ENST00000638029 OR6Y1Q8NGX8 325 aa16.41■□□□□ 0.22
CACNA1A-258ENST00000638029 TRAPPC12Q8WVT3 735 aa16.41■□□□□ 0.22
CACNA1A-258ENST00000638029 IFT46Q9NQC8 304 aa16.41■□□□□ 0.22
CACNA1A-258ENST00000638029 HIF3AQ9Y2N7 669 aa16.41■□□□□ 0.22
CACNA1A-258ENST00000638029 TPRKBQ9Y3C4 175 aa16.41■□□□□ 0.22
CACNA1A-258ENST00000638029 OAS3Q9Y6K5 1087 aaKnown RBP16.41■□□□□ 0.22
CACNA1A-258ENST00000638029 TULP4Q9NRJ4 1543 aa16.41■□□□□ 0.22
CACNA1A-258ENST00000638029 PLIN3O60664 434 aa16.41■□□□□ 0.22
CACNA1A-258ENST00000638029 CLCA4Q14CN2 919 aa16.41■□□□□ 0.22
CACNA1A-258ENST00000638029 TEAD4Q15561 434 aa16.41■□□□□ 0.22
CACNA1A-258ENST00000638029 FRRS1Q6ZNA5 592 aa16.41■□□□□ 0.22
CACNA1A-258ENST00000638029 DHFR2Q86XF0 187 aa16.41■□□□□ 0.22
CACNA1A-258ENST00000638029 COL23A1Q86Y22 540 aaPredicted RBP16.41■□□□□ 0.22
CACNA1A-258ENST00000638029 ZDHHC13Q8IUH4 622 aa16.41■□□□□ 0.22
CACNA1A-258ENST00000638029 ZFRQ96KR1 1074 aaKnown RBP16.41■□□□□ 0.22
CACNA1A-258ENST00000638029 BRF2Q9HAW0 419 aa16.41■□□□□ 0.22
CACNA1A-258ENST00000638029 ASF1AQ9Y294 204 aa16.41■□□□□ 0.22
CACNA1A-258ENST00000638029 MTF2Q9Y483 593 aaPredicted RBP16.41■□□□□ 0.22
CACNA1A-258ENST00000638029 SLCO1B7G3V0H7 640 aa16.4■□□□□ 0.22
CACNA1A-258ENST00000638029 SLC28A1O00337 649 aa16.4■□□□□ 0.22
CACNA1A-258ENST00000638029 EPHB6O15197 1021 aa16.4■□□□□ 0.22
CACNA1A-258ENST00000638029 TPST2O60704 377 aa16.4■□□□□ 0.22
CACNA1A-258ENST00000638029 FUT4P22083 530 aa16.4■□□□□ 0.22
CACNA1A-258ENST00000638029 KCNMB4Q86W47 210 aa16.4■□□□□ 0.22
CACNA1A-258ENST00000638029 CLIP4Q8N3C7 705 aa16.4■□□□□ 0.22
CACNA1A-258ENST00000638029 PNPT1Q8TCS8 783 aaKnown RBP16.4■□□□□ 0.22
CACNA1A-258ENST00000638029 CLOCKO15516 846 aa16.4■□□□□ 0.22
CACNA1A-258ENST00000638029 ZNF16P17020 682 aaPredicted RBP16.4■□□□□ 0.22
CACNA1A-258ENST00000638029 TSGA10IPQ3SY00 556 aa16.4■□□□□ 0.22
CACNA1A-258ENST00000638029 OAFQ86UD1 273 aa16.4■□□□□ 0.22
CACNA1A-258ENST00000638029 PANX3Q96QZ0 392 aa16.4■□□□□ 0.22
CACNA1A-258ENST00000638029 CISHQ9NSE2 258 aa16.4■□□□□ 0.22
CACNA1A-258ENST00000638029 TCF4P15884 667 aa16.4■□□□□ 0.22
CACNA1A-258ENST00000638029 DGKZQ13574 1117 aa16.4■□□□□ 0.22
CACNA1A-258ENST00000638029 PPP2R2DQ66LE6 453 aa16.4■□□□□ 0.22
CACNA1A-258ENST00000638029 KAT5Q92993 513 aa16.4■□□□□ 0.22
CACNA1A-258ENST00000638029 HAVCR1Q96D42 359 aa16.4■□□□□ 0.22
CACNA1A-258ENST00000638029 C15orf38-AP3S2A0A0A6YYH1 394 aa16.4■□□□□ 0.22
CACNA1A-258ENST00000638029 E2F3O00716 465 aa16.4■□□□□ 0.22
CACNA1A-258ENST00000638029 SLC25A14O95258 325 aaPredicted RBP16.4■□□□□ 0.22
CACNA1A-258ENST00000638029 TCAIMQ8N3R3 496 aa16.4■□□□□ 0.22
CACNA1A-258ENST00000638029 AGBL3Q8NEM8 1001 aa16.4■□□□□ 0.22
CACNA1A-258ENST00000638029 AP1S3Q96PC3 154 aa16.4■□□□□ 0.22
CACNA1A-258ENST00000638029 MYRFQ9Y2G1 1151 aa16.4■□□□□ 0.22
CACNA1A-258ENST00000638029 YARS2Q9Y2Z4 477 aaKnown RBP16.4■□□□□ 0.22
CACNA1A-258ENST00000638029 CPED1A4D0V7 1026 aa16.4■□□□□ 0.22
CACNA1A-258ENST00000638029 ACLYP53396 1101 aa16.4■□□□□ 0.22
CACNA1A-258ENST00000638029 CAV3P56539 151 aa16.4■□□□□ 0.22
CACNA1A-258ENST00000638029 QPRTQ15274 297 aa16.4■□□□□ 0.22
CACNA1A-258ENST00000638029 LIX1Q8N485 282 aa16.4■□□□□ 0.22
CACNA1A-258ENST00000638029 HELQQ8TDG4 1101 aa16.4■□□□□ 0.22
CACNA1A-258ENST00000638029 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms