RNA–Protein interactions for RNA: ENST00000613524.4

SYCP1-209, Transcript of synaptonemal complex protein 1, humanhuman

TSL 1 (best) BASIC

Gene SYCP1, Length 3,034 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYCP1-209ENST00000613524 ELOVL2Q9NXB9 296 aa5.05□□□□□ -1.6
SYCP1-209ENST00000613524 CLIC5Q9NZA1 410 aa5.05□□□□□ -1.6
SYCP1-209ENST00000613524 GGA2Q9UJY4 613 aa5.05□□□□□ -1.6
SYCP1-209ENST00000613524 DYNC1LI1Q9Y6G9 523 aaKnown RBP5.05□□□□□ -1.6
SYCP1-209ENST00000613524 STON1Q9Y6Q2 735 aa5.05□□□□□ -1.6
SYCP1-209ENST00000613524 MGAQ8IWI9 3026 aa5.05□□□□□ -1.6
SYCP1-209ENST00000613524 LOC105378220A0A1B0GUY1 285 aaPredicted RBP5.05□□□□□ -1.6
SYCP1-209ENST00000613524 LRRD1A4D1F6 860 aa5.05□□□□□ -1.6
SYCP1-209ENST00000613524 ANKRD65E5RJM6 399 aa5.05□□□□□ -1.6
SYCP1-209ENST00000613524 E9PAM4 449 aa5.05□□□□□ -1.6
SYCP1-209ENST00000613524 MYO1FO00160 1098 aa5.05□□□□□ -1.6
SYCP1-209ENST00000613524 KRIT1O00522 736 aa5.05□□□□□ -1.6
SYCP1-209ENST00000613524 SART1O43290 800 aaKnown RBP5.05□□□□□ -1.6
SYCP1-209ENST00000613524 ADAM23O75077 832 aa5.05□□□□□ -1.6
SYCP1-209ENST00000613524 LRIG2O94898 1065 aa5.05□□□□□ -1.6
SYCP1-209ENST00000613524 SP9P0CG40 484 aa5.05□□□□□ -1.6
SYCP1-209ENST00000613524 PRLRP16471 622 aa5.05□□□□□ -1.6
SYCP1-209ENST00000613524 AMPD1P23109 780 aa5.05□□□□□ -1.6
SYCP1-209ENST00000613524 PMLP29590 882 aa5.05□□□□□ -1.6
SYCP1-209ENST00000613524 MIPP30301 263 aa5.05□□□□□ -1.6
SYCP1-209ENST00000613524 CDH6P55285 790 aa5.05□□□□□ -1.6
SYCP1-209ENST00000613524 HDAC4P56524 1084 aa5.05□□□□□ -1.6
SYCP1-209ENST00000613524 TPI1P60174 286 aa5.05□□□□□ -1.6
SYCP1-209ENST00000613524 RPS26P62854 115 aaKnown RBP5.05□□□□□ -1.6
SYCP1-209ENST00000613524 KRT83P78385 493 aa5.05□□□□□ -1.6
SYCP1-209ENST00000613524 KCNC4Q03721 635 aa5.05□□□□□ -1.6
SYCP1-209ENST00000613524 C2orf54Q08AI8 447 aa5.05□□□□□ -1.6
SYCP1-209ENST00000613524 PTPRRQ15256 657 aa5.05□□□□□ -1.6
SYCP1-209ENST00000613524 CRY1Q16526 586 aa5.05□□□□□ -1.6
SYCP1-209ENST00000613524 FUT11Q495W5 492 aa5.05□□□□□ -1.6
SYCP1-209ENST00000613524 ZNF542PQ5EBM4 170 aa5.05□□□□□ -1.6
SYCP1-209ENST00000613524 EFHC2Q5JST6 749 aa5.05□□□□□ -1.6
SYCP1-209ENST00000613524 FYB2Q5VWT5 728 aa5.05□□□□□ -1.6
SYCP1-209ENST00000613524 ARHGAP36Q6ZRI8 547 aa5.05□□□□□ -1.6
SYCP1-209ENST00000613524 ANKS1BQ7Z6G8 1248 aa5.05□□□□□ -1.6
SYCP1-209ENST00000613524 SPATS2Q86XZ4 545 aaKnown RBP5.05□□□□□ -1.6
SYCP1-209ENST00000613524 CCDC170Q8IYT3 715 aa5.05□□□□□ -1.6
SYCP1-209ENST00000613524 STK40Q8N2I9 435 aa5.05□□□□□ -1.6
SYCP1-209ENST00000613524 MMGT1Q8N4V1 131 aa5.05□□□□□ -1.6
SYCP1-209ENST00000613524 CISD2Q8N5K1 135 aaKnown RBP5.05□□□□□ -1.6
SYCP1-209ENST00000613524 ZNF564Q8TBZ8 553 aaPredicted RBP5.05□□□□□ -1.6
SYCP1-209ENST00000613524 CRB3Q9BUF7 120 aa5.05□□□□□ -1.6
SYCP1-209ENST00000613524 C8orf33Q9H7E9 229 aaPredicted RBP5.05□□□□□ -1.6
SYCP1-209ENST00000613524 OLA1Q9NTK5 396 aaKnown RBP5.05□□□□□ -1.6
SYCP1-209ENST00000613524 HSFX1Q9UBD0 423 aa5.05□□□□□ -1.6
SYCP1-209ENST00000613524 APC2O95996 2303 aa5.04□□□□□ -1.6
SYCP1-209ENST00000613524 A0A1W2PQJ5 194 aa5.04□□□□□ -1.6
SYCP1-209ENST00000613524 SLC31A1O15431 190 aa5.04□□□□□ -1.6
SYCP1-209ENST00000613524 EFSO43281 561 aa5.04□□□□□ -1.6
SYCP1-209ENST00000613524 KRT86O43790 486 aa5.04□□□□□ -1.6
SYCP1-209ENST00000613524 NDUFS2O75306 463 aa5.04□□□□□ -1.6
SYCP1-209ENST00000613524 RPP40O75818 363 aaKnown RBP5.04□□□□□ -1.6
SYCP1-209ENST00000613524 KRT37O76014 449 aa5.04□□□□□ -1.6
SYCP1-209ENST00000613524 PCDH8O95206 1070 aa5.04□□□□□ -1.6
SYCP1-209ENST00000613524 SERPING1P05155 500 aa5.04□□□□□ -1.6
SYCP1-209ENST00000613524 CALB1P05937 261 aa5.04□□□□□ -1.6
SYCP1-209ENST00000613524 GSTP1P09211 210 aaKnown RBP5.04□□□□□ -1.6
SYCP1-209ENST00000613524 UNGP13051 313 aaPredicted RBP5.04□□□□□ -1.6
SYCP1-209ENST00000613524 MCM3P25205 808 aa5.04□□□□□ -1.6
SYCP1-209ENST00000613524 HNRNPH3P31942 346 aaKnown RBP5.04□□□□□ -1.6
SYCP1-209ENST00000613524 RDXP35241 583 aaKnown RBP5.04□□□□□ -1.6
SYCP1-209ENST00000613524 MAGEA1P43355 309 aa5.04□□□□□ -1.6
SYCP1-209ENST00000613524 TNNT3P45378 269 aaPredicted RBP5.04□□□□□ -1.6
SYCP1-209ENST00000613524 PPP3CCP48454 512 aa5.04□□□□□ -1.6
SYCP1-209ENST00000613524 PRKCQQ04759 706 aa5.04□□□□□ -1.6
SYCP1-209ENST00000613524 CKAP4Q07065 602 aaKnown RBP5.04□□□□□ -1.6
SYCP1-209ENST00000613524 MAMLD1Q13495 774 aa5.04□□□□□ -1.6
SYCP1-209ENST00000613524 UBAP2LQ14157 1087 aaKnown RBP5.04□□□□□ -1.6
SYCP1-209ENST00000613524 LRRC32Q14392 662 aa5.04□□□□□ -1.6
SYCP1-209ENST00000613524 SPA17Q15506 151 aa5.04□□□□□ -1.6
SYCP1-209ENST00000613524 MPPE1Q53F39 396 aa5.04□□□□□ -1.6
SYCP1-209ENST00000613524 OTUD1Q5VV17 481 aaPredicted RBP5.04□□□□□ -1.6
SYCP1-209ENST00000613524 AADACL2Q6P093 401 aa5.04□□□□□ -1.6
SYCP1-209ENST00000613524 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP5.04□□□□□ -1.6
SYCP1-209ENST00000613524 USP53Q70EK8 1073 aa5.04□□□□□ -1.6
SYCP1-209ENST00000613524 HTR3DQ70Z44 454 aa5.04□□□□□ -1.6
SYCP1-209ENST00000613524 SLFN11Q7Z7L1 901 aa5.04□□□□□ -1.6
SYCP1-209ENST00000613524 OR14C36Q8NHC7 312 aa5.04□□□□□ -1.6
SYCP1-209ENST00000613524 CHTF18Q8WVB6 975 aa5.04□□□□□ -1.6
SYCP1-209ENST00000613524 KCTD13Q8WZ19 329 aa5.04□□□□□ -1.6
SYCP1-209ENST00000613524 SIPA1Q96FS4 1042 aa5.04□□□□□ -1.6
SYCP1-209ENST00000613524 BTN2A3PQ96KV6 586 aa5.04□□□□□ -1.6
SYCP1-209ENST00000613524 HSPA12BQ96MM6 686 aa5.04□□□□□ -1.6
SYCP1-209ENST00000613524 SH3GL2Q99962 352 aa5.04□□□□□ -1.6
SYCP1-209ENST00000613524 NOL6Q9H6R4 1146 aaKnown RBP5.04□□□□□ -1.6
SYCP1-209ENST00000613524 SLTMQ9NWH9 1034 aaKnown RBP eCLIP5.04□□□□□ -1.6
SYCP1-209ENST00000613524 MOSPD1Q9UJG1 213 aa5.04□□□□□ -1.6
SYCP1-209ENST00000613524 INTS6Q9UL03 887 aaKnown RBP5.04□□□□□ -1.6
SYCP1-209ENST00000613524 SNX12Q9UMY4 172 aa5.04□□□□□ -1.6
SYCP1-209ENST00000613524 AP4E1Q9UPM8 1137 aa5.04□□□□□ -1.6
SYCP1-209ENST00000613524 SLCO1B1Q9Y6L6 691 aa5.04□□□□□ -1.6
SYCP1-209ENST00000613524 SPTA1P02549 2419 aa5.04□□□□□ -1.6
SYCP1-209ENST00000613524 NBASA2RRP1 2371 aa5.04□□□□□ -1.6
SYCP1-209ENST00000613524 TBC1D3DA0A087WVF3 549 aa5.04□□□□□ -1.6
SYCP1-209ENST00000613524 TBC1D3IA0A087WXS9 549 aa5.04□□□□□ -1.6
SYCP1-209ENST00000613524 TBC1D3EA0A087X179 549 aa5.04□□□□□ -1.6
SYCP1-209ENST00000613524 TBC1D3KA0A087X1G2 549 aa5.04□□□□□ -1.6
SYCP1-209ENST00000613524 CCDC78A2IDD5 438 aa5.04□□□□□ -1.6
SYCP1-209ENST00000613524 TBC1D3FA6NER0 549 aaPredicted RBP5.04□□□□□ -1.6
SYCP1-209ENST00000613524 TTLL8A6PVC2 850 aa5.04□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms