RNA–Protein interactions for RNA: ENST00000578178.5

PPP4R1-208, Transcript of protein phosphatase 4 regulatory subunit 1, human

TSL 4

Gene PPP4R1, Length 468 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PPP4R1-208	ENST00000578178	MAP3K6	O95382	1288 aa		11	□□□□□ -0.65
PPP4R1-208	ENST00000578178	LCA5L	O95447	670 aa		11	□□□□□ -0.65
PPP4R1-208	ENST00000578178	LDOC1	O95751	146 aa	Predicted RBP	11	□□□□□ -0.65
PPP4R1-208	ENST00000578178	CP	P00450	1065 aa		11	□□□□□ -0.65
PPP4R1-208	ENST00000578178	KRT1	P04264	644 aa		11	□□□□□ -0.65
PPP4R1-208	ENST00000578178	NME1	P15531	152 aa	Known RBP	11	□□□□□ -0.65
PPP4R1-208	ENST00000578178	MX2	P20592	715 aa		11	□□□□□ -0.65
PPP4R1-208	ENST00000578178	DGKA	P23743	735 aa		11	□□□□□ -0.65
PPP4R1-208	ENST00000578178	KDELR1	P24390	212 aa		11	□□□□□ -0.65
PPP4R1-208	ENST00000578178	CYLC1	P35663	651 aa	Predicted RBP	11	□□□□□ -0.65
PPP4R1-208	ENST00000578178	SLC1A1	P43005	524 aa		11	□□□□□ -0.65
PPP4R1-208	ENST00000578178	LIG3	P49916	1009 aa		11	□□□□□ -0.65
PPP4R1-208	ENST00000578178	THOP1	P52888	689 aa		11	□□□□□ -0.65
PPP4R1-208	ENST00000578178	MAX	P61244	160 aa		11	□□□□□ -0.65
PPP4R1-208	ENST00000578178	HNRNPK	P61978	463 aa	Known RBP eCLIP	11	□□□□□ -0.65
PPP4R1-208	ENST00000578178	POLR2L	P62875	67 aa	Known RBP	11	□□□□□ -0.65
PPP4R1-208	ENST00000578178	GBE1	Q04446	702 aa		11	□□□□□ -0.65
PPP4R1-208	ENST00000578178	IRF4	Q15306	451 aa		11	□□□□□ -0.65
PPP4R1-208	ENST00000578178	IFI16	Q16666	785 aa	Known RBP	11	□□□□□ -0.65
PPP4R1-208	ENST00000578178	LRRC38	Q5VT99	294 aa		11	□□□□□ -0.65
PPP4R1-208	ENST00000578178	UNQ6494/PRO21346	Q6UXR6	183 aa		11	□□□□□ -0.65
PPP4R1-208	ENST00000578178	KDM7A	Q6ZMT4	941 aa		11	□□□□□ -0.65
PPP4R1-208	ENST00000578178	DPPA4	Q7L190	304 aa		11	□□□□□ -0.65
PPP4R1-208	ENST00000578178	CCDC170	Q8IYT3	715 aa		11	□□□□□ -0.65
PPP4R1-208	ENST00000578178	TEX26	Q8N6G2	289 aa		11	□□□□□ -0.65
PPP4R1-208	ENST00000578178	TRAF3IP1	Q8TDR0	691 aa	Predicted RBP	11	□□□□□ -0.65
PPP4R1-208	ENST00000578178	MAML1	Q92585	1016 aa		11	□□□□□ -0.65
PPP4R1-208	ENST00000578178	GATA6	Q92908	595 aa		11	□□□□□ -0.65
PPP4R1-208	ENST00000578178	FATE1	Q969F0	183 aa		11	□□□□□ -0.65
PPP4R1-208	ENST00000578178	HDAC11	Q96DB2	347 aa		11	□□□□□ -0.65
PPP4R1-208	ENST00000578178	ZNF830	Q96NB3	372 aa	Predicted RBP	11	□□□□□ -0.65
PPP4R1-208	ENST00000578178	RNF157	Q96PX1	679 aa		11	□□□□□ -0.65
PPP4R1-208	ENST00000578178	TMEM121B	Q9BXQ6	578 aa	Predicted RBP	11	□□□□□ -0.65
PPP4R1-208	ENST00000578178	NOD2	Q9HC29	1040 aa		11	□□□□□ -0.65
PPP4R1-208	ENST00000578178	NT5M	Q9NPB1	228 aa		11	□□□□□ -0.65
PPP4R1-208	ENST00000578178	LUC7L	Q9NQ29	371 aa	Known RBP	11	□□□□□ -0.65
PPP4R1-208	ENST00000578178	HAUS2	Q9NVX0	235 aa		11	□□□□□ -0.65
PPP4R1-208	ENST00000578178	DNAJC28	Q9NX36	388 aa		11	□□□□□ -0.65
PPP4R1-208	ENST00000578178	COQ6	Q9Y2Z9	468 aa		11	□□□□□ -0.65
PPP4R1-208	ENST00000578178	MSRB2	Q9Y3D2	182 aa		11	□□□□□ -0.65
PPP4R1-208	ENST00000578178	PCDHGA1	Q9Y5H4	931 aa		11	□□□□□ -0.65
PPP4R1-208	ENST00000578178	IGF2R	P11717	2491 aa		11	□□□□□ -0.65
PPP4R1-208	ENST00000578178	GOLGA4	Q13439	2230 aa	Known RBP	11	□□□□□ -0.65
PPP4R1-208	ENST00000578178	LRP4	O75096	1905 aa		10.99	□□□□□ -0.65
PPP4R1-208	ENST00000578178	TTC24	A2A3L6	582 aa	Predicted RBP	10.99	□□□□□ -0.65
PPP4R1-208	ENST00000578178	CFAP69	A5D8W1	941 aa		10.99	□□□□□ -0.65
PPP4R1-208	ENST00000578178	FAM221B	A6H8Z2	402 aa		10.99	□□□□□ -0.65
PPP4R1-208	ENST00000578178	C1QTNF9B	B2RNN3	333 aa		10.99	□□□□□ -0.65
PPP4R1-208	ENST00000578178	SPOP	O43791	374 aa		10.99	□□□□□ -0.65
PPP4R1-208	ENST00000578178	LZTS3	O60299	673 aa	Predicted RBP	10.99	□□□□□ -0.65
PPP4R1-208	ENST00000578178	RFPL3	O75679	317 aa		10.99	□□□□□ -0.65
PPP4R1-208	ENST00000578178	CSF2	P04141	144 aa		10.99	□□□□□ -0.65
PPP4R1-208	ENST00000578178	ELFN1	P0C7U0	828 aa		10.99	□□□□□ -0.65
PPP4R1-208	ENST00000578178	C1QTNF9	P0C862	333 aa		10.99	□□□□□ -0.65
PPP4R1-208	ENST00000578178	ALPPL2	P10696	532 aa		10.99	□□□□□ -0.65
PPP4R1-208	ENST00000578178	FECH	P22830	423 aa		10.99	□□□□□ -0.65
PPP4R1-208	ENST00000578178	MAGEA1	P43355	309 aa		10.99	□□□□□ -0.65
PPP4R1-208	ENST00000578178	ACADVL	P49748	655 aa		10.99	□□□□□ -0.65
PPP4R1-208	ENST00000578178	HADHB	P55084	474 aa	Known RBP	10.99	□□□□□ -0.65
PPP4R1-208	ENST00000578178	YPEL5	P62699	121 aa		10.99	□□□□□ -0.65
PPP4R1-208	ENST00000578178	SEMG2	Q02383	582 aa		10.99	□□□□□ -0.65
PPP4R1-208	ENST00000578178	TRAF2	Q12933	501 aa		10.99	□□□□□ -0.65
PPP4R1-208	ENST00000578178	DNAJC3	Q13217	504 aa		10.99	□□□□□ -0.65
PPP4R1-208	ENST00000578178	PTK2B	Q14289	1009 aa		10.99	□□□□□ -0.65
PPP4R1-208	ENST00000578178	LRRC14	Q15048	493 aa		10.99	□□□□□ -0.65
PPP4R1-208	ENST00000578178	AGER	Q15109	404 aa		10.99	□□□□□ -0.65
PPP4R1-208	ENST00000578178	SPA17	Q15506	151 aa		10.99	□□□□□ -0.65
PPP4R1-208	ENST00000578178	WSCD2	Q2TBF2	565 aa		10.99	□□□□□ -0.65
PPP4R1-208	ENST00000578178	HS1BP3	Q53T59	392 aa		10.99	□□□□□ -0.65
PPP4R1-208	ENST00000578178	CCDC157	Q569K6	752 aa		10.99	□□□□□ -0.65
PPP4R1-208	ENST00000578178	ZNF542P	Q5EBM4	170 aa		10.99	□□□□□ -0.65
PPP4R1-208	ENST00000578178	TPRG1L	Q5T0D9	272 aa		10.99	□□□□□ -0.65
PPP4R1-208	ENST00000578178	SLC9A4	Q6AI14	798 aa		10.99	□□□□□ -0.65
PPP4R1-208	ENST00000578178	ALG1L	Q6GMV1	187 aa		10.99	□□□□□ -0.65
PPP4R1-208	ENST00000578178	MACC1	Q6ZN28	852 aa		10.99	□□□□□ -0.65
PPP4R1-208	ENST00000578178	GAS2L3	Q86XJ1	694 aa		10.99	□□□□□ -0.65
PPP4R1-208	ENST00000578178	RHOT1	Q8IXI2	618 aa		10.99	□□□□□ -0.65
PPP4R1-208	ENST00000578178	SLC25A45	Q8N413	288 aa		10.99	□□□□□ -0.65
PPP4R1-208	ENST00000578178	PLD5	Q8N7P1	536 aa		10.99	□□□□□ -0.65
PPP4R1-208	ENST00000578178	ZNF548	Q8NEK5	533 aa	Predicted RBP	10.99	□□□□□ -0.65
PPP4R1-208	ENST00000578178	OR4C6	Q8NH72	309 aa		10.99	□□□□□ -0.65
PPP4R1-208	ENST00000578178	PDCD6IP	Q8WUM4	868 aa	Known RBP	10.99	□□□□□ -0.65
PPP4R1-208	ENST00000578178	TSGA13	Q96PP4	275 aa		10.99	□□□□□ -0.65
PPP4R1-208	ENST00000578178	PANX2	Q96RD6	677 aa		10.99	□□□□□ -0.65
PPP4R1-208	ENST00000578178	POLR1E	Q9GZS1	481 aa	Known RBP	10.99	□□□□□ -0.65
PPP4R1-208	ENST00000578178	MBNL1	Q9NR56	388 aa	Known RBP	10.99	□□□□□ -0.65
PPP4R1-208	ENST00000578178	UCKL1	Q9NWZ5	548 aa		10.99	□□□□□ -0.65
PPP4R1-208	ENST00000578178	DDX56	Q9NY93	547 aa	Known RBP	10.99	□□□□□ -0.65
PPP4R1-208	ENST00000578178	DTL	Q9NZJ0	730 aa		10.99	□□□□□ -0.65
PPP4R1-208	ENST00000578178	B4GALT6	Q9UBX8	382 aa		10.99	□□□□□ -0.65
PPP4R1-208	ENST00000578178	AMACR	Q9UHK6	382 aa		10.99	□□□□□ -0.65
PPP4R1-208	ENST00000578178	PCDHGC4	Q9Y5F7	938 aa		10.99	□□□□□ -0.65
PPP4R1-208	ENST00000578178	SPEG	Q15772	3267 aa		10.98	□□□□□ -0.65
PPP4R1-208	ENST00000578178	PLXNB3	Q9ULL4	1909 aa		10.98	□□□□□ -0.65
PPP4R1-208	ENST00000578178		A0A0A6YYK5	440 aa	Predicted RBP	10.98	□□□□□ -0.65
PPP4R1-208	ENST00000578178	NEMP2	A6NFY4	417 aa		10.98	□□□□□ -0.65
PPP4R1-208	ENST00000578178	C3orf70	A6NLC5	250 aa	Predicted RBP	10.98	□□□□□ -0.65
PPP4R1-208	ENST00000578178	TRIM38	O00635	465 aa		10.98	□□□□□ -0.65
PPP4R1-208	ENST00000578178	APOL1	O14791	398 aa		10.98	□□□□□ -0.65
PPP4R1-208	ENST00000578178	MATN3	O15232	486 aa		10.98	□□□□□ -0.65

Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms