RNA–Protein interactions for RNA: ENST00000532160.1

VPS26B-207, Transcript of VPS26, retromer complex component B, humanhuman

TSL 2

Gene VPS26B, Length 858 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26B-207ENST00000532160 RNF157Q96PX1 679 aa9.53□□□□□ -0.88
VPS26B-207ENST00000532160 ZNF670Q9BS34 389 aa9.53□□□□□ -0.88
VPS26B-207ENST00000532160 SPON2Q9BUD6 331 aa9.53□□□□□ -0.88
VPS26B-207ENST00000532160 SLC39A8Q9C0K1 460 aa9.53□□□□□ -0.88
VPS26B-207ENST00000532160 KLC2Q9H0B6 622 aa9.53□□□□□ -0.88
VPS26B-207ENST00000532160 MUC3BQ9H195 1237 aa9.53□□□□□ -0.88
VPS26B-207ENST00000532160 NOL6Q9H6R4 1146 aaKnown RBP9.53□□□□□ -0.88
VPS26B-207ENST00000532160 CATSPERBQ9H7T0 1116 aa9.53□□□□□ -0.88
VPS26B-207ENST00000532160 GDF3Q9NR23 364 aa9.53□□□□□ -0.88
VPS26B-207ENST00000532160 SARDHQ9UL12 918 aa9.53□□□□□ -0.88
VPS26B-207ENST00000532160 PCDHGA1Q9Y5H4 931 aa9.53□□□□□ -0.88
VPS26B-207ENST00000532160 ACTL7AQ9Y615 435 aa9.53□□□□□ -0.88
VPS26B-207ENST00000532160 TBC1D3DA0A087WVF3 549 aa9.52□□□□□ -0.89
VPS26B-207ENST00000532160 TBC1D3IA0A087WXS9 549 aa9.52□□□□□ -0.89
VPS26B-207ENST00000532160 TBC1D3EA0A087X179 549 aa9.52□□□□□ -0.89
VPS26B-207ENST00000532160 TBC1D3KA0A087X1G2 549 aa9.52□□□□□ -0.89
VPS26B-207ENST00000532160 TBC1D3FA6NER0 549 aaPredicted RBP9.52□□□□□ -0.89
VPS26B-207ENST00000532160 WASH4PA8MWX3 477 aa9.52□□□□□ -0.89
VPS26B-207ENST00000532160 TBC1D3LB9A6J9 549 aa9.52□□□□□ -0.89
VPS26B-207ENST00000532160 RASA4BC9J798 803 aa9.52□□□□□ -0.89
VPS26B-207ENST00000532160 TLR4O00206 839 aa9.52□□□□□ -0.89
VPS26B-207ENST00000532160 DFFAO00273 331 aa9.52□□□□□ -0.89
VPS26B-207ENST00000532160 FGF10O15520 208 aaPredicted RBP9.52□□□□□ -0.89
VPS26B-207ENST00000532160 RASA4O43374 803 aa9.52□□□□□ -0.89
VPS26B-207ENST00000532160 LATO43561 262 aa9.52□□□□□ -0.89
VPS26B-207ENST00000532160 TLX3O43711 291 aaPredicted RBP9.52□□□□□ -0.89
VPS26B-207ENST00000532160 MFSD11O43934 449 aa9.52□□□□□ -0.89
VPS26B-207ENST00000532160 SNAP91O60641 907 aa9.52□□□□□ -0.89
VPS26B-207ENST00000532160 CST8O60676 142 aa9.52□□□□□ -0.89
VPS26B-207ENST00000532160 RAMP2O60895 175 aa9.52□□□□□ -0.89
VPS26B-207ENST00000532160 RFPL3O75679 317 aa9.52□□□□□ -0.89
VPS26B-207ENST00000532160 TBC1D3HP0C7X1 549 aa9.52□□□□□ -0.89
VPS26B-207ENST00000532160 MAT2AP31153 395 aaKnown RBP9.52□□□□□ -0.89
VPS26B-207ENST00000532160 HCAR3P49019 387 aa9.52□□□□□ -0.89
VPS26B-207ENST00000532160 MAPKAPK2P49137 400 aa9.52□□□□□ -0.89
VPS26B-207ENST00000532160 GNA12Q03113 381 aa9.52□□□□□ -0.89
VPS26B-207ENST00000532160 GBE1Q04446 702 aa9.52□□□□□ -0.89
VPS26B-207ENST00000532160 SFSWAPQ12872 951 aaKnown RBP9.52□□□□□ -0.89
VPS26B-207ENST00000532160 ELAVL3Q14576 367 aaKnown RBP9.52□□□□□ -0.89
VPS26B-207ENST00000532160 POM121L1PQ3SYA9 428 aa9.52□□□□□ -0.89
VPS26B-207ENST00000532160 C6orf118Q5T5N4 469 aa9.52□□□□□ -0.89
VPS26B-207ENST00000532160 HES3Q5TGS1 186 aa9.52□□□□□ -0.89
VPS26B-207ENST00000532160 TBC1D3GQ6DHY5 549 aa9.52□□□□□ -0.89
VPS26B-207ENST00000532160 TBC1D3CQ6IPX1 549 aa9.52□□□□□ -0.89
VPS26B-207ENST00000532160 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP9.52□□□□□ -0.89
VPS26B-207ENST00000532160 ARHGAP36Q6ZRI8 547 aa9.52□□□□□ -0.89
VPS26B-207ENST00000532160 KANSL1Q7Z3B3 1105 aa9.52□□□□□ -0.89
VPS26B-207ENST00000532160 SPATS2Q86XZ4 545 aaKnown RBP9.52□□□□□ -0.89
VPS26B-207ENST00000532160 ARHGAP12Q8IWW6 846 aa9.52□□□□□ -0.89
VPS26B-207ENST00000532160 TBC1D3Q8IZP1 549 aaPredicted RBP9.52□□□□□ -0.89
VPS26B-207ENST00000532160 MMGT1Q8N4V1 131 aa9.52□□□□□ -0.89
VPS26B-207ENST00000532160 PLD5Q8N7P1 536 aa9.52□□□□□ -0.89
VPS26B-207ENST00000532160 EIF1ADQ8N9N8 165 aaKnown RBP9.52□□□□□ -0.89
VPS26B-207ENST00000532160 PIP4K2CQ8TBX8 421 aa9.52□□□□□ -0.89
VPS26B-207ENST00000532160 TRAF3IP1Q8TDR0 691 aaPredicted RBP9.52□□□□□ -0.89
VPS26B-207ENST00000532160 FAM131CQ96AQ9 280 aa9.52□□□□□ -0.89
VPS26B-207ENST00000532160 SKA1Q96BD8 255 aa9.52□□□□□ -0.89
VPS26B-207ENST00000532160 FAF2Q96CS3 445 aa9.52□□□□□ -0.89
VPS26B-207ENST00000532160 NXPE2Q96DL1 559 aa9.52□□□□□ -0.89
VPS26B-207ENST00000532160 ALG14Q96F25 216 aa9.52□□□□□ -0.89
VPS26B-207ENST00000532160 HMCESQ96FZ2 354 aa9.52□□□□□ -0.89
VPS26B-207ENST00000532160 RBM41Q96IZ5 413 aaKnown RBP9.52□□□□□ -0.89
VPS26B-207ENST00000532160 FAM118BQ9BPY3 351 aa9.52□□□□□ -0.89
VPS26B-207ENST00000532160 MAK16Q9BXY0 300 aaKnown RBP9.52□□□□□ -0.89
VPS26B-207ENST00000532160 OSBPL8Q9BZF1 889 aa9.52□□□□□ -0.89
VPS26B-207ENST00000532160 ATP13A1Q9HD20 1204 aa9.52□□□□□ -0.89
VPS26B-207ENST00000532160 RCOR3Q9P2K3 495 aaPredicted RBP9.52□□□□□ -0.89
VPS26B-207ENST00000532160 SAE1Q9UBE0 346 aaPredicted RBP9.52□□□□□ -0.89
VPS26B-207ENST00000532160 VPS28Q9UK41 221 aa9.52□□□□□ -0.89
VPS26B-207ENST00000532160 CA5BQ9Y2D0 317 aa9.52□□□□□ -0.89
VPS26B-207ENST00000532160 TBC1D30Q9Y2I9 924 aa9.52□□□□□ -0.89
VPS26B-207ENST00000532160 SETXQ7Z333 2677 aaKnown RBP9.52□□□□□ -0.89
VPS26B-207ENST00000532160 CFAP46Q8IYW2 2715 aa9.52□□□□□ -0.89
VPS26B-207ENST00000532160 ATMQ13315 3056 aa9.52□□□□□ -0.89
VPS26B-207ENST00000532160 DOCK4Q8N1I0 1966 aa9.52□□□□□ -0.89
VPS26B-207ENST00000532160 FLNBO75369 2602 aaKnown RBP9.52□□□□□ -0.89
VPS26B-207ENST00000532160 TCRBV7S2A1N4TA0A589 114 aa9.51□□□□□ -0.89
VPS26B-207ENST00000532160 ILVBLA1L0T0 632 aa9.51□□□□□ -0.89
VPS26B-207ENST00000532160 APOL1O14791 398 aa9.51□□□□□ -0.89
VPS26B-207ENST00000532160 YKT6O15498 198 aa9.51□□□□□ -0.89
VPS26B-207ENST00000532160 JUPP14923 745 aa9.51□□□□□ -0.89
VPS26B-207ENST00000532160 PECAM1P16284 738 aaPredicted RBP9.51□□□□□ -0.89
VPS26B-207ENST00000532160 ITPKBP27987 946 aa9.51□□□□□ -0.89
VPS26B-207ENST00000532160 HTR7P34969 479 aa9.51□□□□□ -0.89
VPS26B-207ENST00000532160 HNF1BP35680 557 aa9.51□□□□□ -0.89
VPS26B-207ENST00000532160 ABCG1P45844 678 aa9.51□□□□□ -0.89
VPS26B-207ENST00000532160 RXRGP48443 463 aa9.51□□□□□ -0.89
VPS26B-207ENST00000532160 ARRB1P49407 418 aaPredicted RBP9.51□□□□□ -0.89
VPS26B-207ENST00000532160 PAPOLAP51003 745 aaKnown RBP9.51□□□□□ -0.89
VPS26B-207ENST00000532160 ZNF135P52742 658 aaPredicted RBP9.51□□□□□ -0.89
VPS26B-207ENST00000532160 SLC10A2Q12908 348 aaPredicted RBP9.51□□□□□ -0.89
VPS26B-207ENST00000532160 TARDBPQ13148 414 aaKnown RBP eCLIP9.51□□□□□ -0.89
VPS26B-207ENST00000532160 POLD3Q15054 466 aaPredicted RBP9.51□□□□□ -0.89
VPS26B-207ENST00000532160 TAZQ16635 292 aa9.51□□□□□ -0.89
VPS26B-207ENST00000532160 TFDP3Q5H9I0 405 aa9.51□□□□□ -0.89
VPS26B-207ENST00000532160 LCE2DQ5TA82 110 aaPredicted RBP9.51□□□□□ -0.89
VPS26B-207ENST00000532160 AGBL4Q5VU57 503 aa9.51□□□□□ -0.89
VPS26B-207ENST00000532160 SLC9A4Q6AI14 798 aa9.51□□□□□ -0.89
VPS26B-207ENST00000532160 NAPEPLDQ6IQ20 393 aa9.51□□□□□ -0.89
VPS26B-207ENST00000532160 FBXL19Q6PCT2 694 aa9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms