RNA–Protein interactions for RNA: ENST00000462146.6

PDZRN3-203, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 2 BASIC

Gene PDZRN3, Length 2,927 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-203ENST00000462146 NCAM2O15394 837 aa11.8□□□□□ -0.52
PDZRN3-203ENST00000462146 ATP6V1G1O75348 118 aa11.8□□□□□ -0.52
PDZRN3-203ENST00000462146 PMPCBO75439 489 aa11.8□□□□□ -0.52
PDZRN3-203ENST00000462146 GPC4O75487 556 aa11.8□□□□□ -0.52
PDZRN3-203ENST00000462146 ATE1O95260 518 aa11.8□□□□□ -0.52
PDZRN3-203ENST00000462146 CPB1P15086 417 aa11.8□□□□□ -0.52
PDZRN3-203ENST00000462146 OXTRP30559 389 aa11.8□□□□□ -0.52
PDZRN3-203ENST00000462146 LILRA4P59901 499 aa11.8□□□□□ -0.52
PDZRN3-203ENST00000462146 CAPRIN1Q14444 709 aaKnown RBP11.8□□□□□ -0.52
PDZRN3-203ENST00000462146 PPP4R4Q6NUP7 873 aa11.8□□□□□ -0.52
PDZRN3-203ENST00000462146 GPR141Q7Z602 305 aa11.8□□□□□ -0.52
PDZRN3-203ENST00000462146 LDB1Q86U70 411 aaPredicted RBP11.8□□□□□ -0.52
PDZRN3-203ENST00000462146 GPR180Q86V85 440 aa11.8□□□□□ -0.52
PDZRN3-203ENST00000462146 RBM12BQ8IXT5 1001 aaKnown RBP11.8□□□□□ -0.52
PDZRN3-203ENST00000462146 OFCC1Q8IZS5 231 aa11.8□□□□□ -0.52
PDZRN3-203ENST00000462146 ARRDC4Q8NCT1 418 aa11.8□□□□□ -0.52
PDZRN3-203ENST00000462146 TOP1MTQ969P6 601 aa11.8□□□□□ -0.52
PDZRN3-203ENST00000462146 NTAN1Q96AB6 310 aa11.8□□□□□ -0.52
PDZRN3-203ENST00000462146 TNIP3Q96KP6 325 aa11.8□□□□□ -0.52
PDZRN3-203ENST00000462146 COLEC11Q9BWP8 271 aa11.8□□□□□ -0.52
PDZRN3-203ENST00000462146 NAA50Q9GZZ1 169 aaKnown RBP11.8□□□□□ -0.52
PDZRN3-203ENST00000462146 CRTAC1Q9NQ79 661 aa11.8□□□□□ -0.52
PDZRN3-203ENST00000462146 GDAP2Q9NXN4 497 aa11.8□□□□□ -0.52
PDZRN3-203ENST00000462146 SLC8A2Q9UPR5 921 aa11.8□□□□□ -0.52
PDZRN3-203ENST00000462146 TIMM13Q9Y5L4 95 aaPredicted RBP11.8□□□□□ -0.52
PDZRN3-203ENST00000462146 NRCAMQ92823 1304 aa11.8□□□□□ -0.52
PDZRN3-203ENST00000462146 FAM155AB1AL88 458 aaPredicted RBP11.8□□□□□ -0.52
PDZRN3-203ENST00000462146 FZD9O00144 591 aa11.8□□□□□ -0.52
PDZRN3-203ENST00000462146 CCL22O00626 93 aa11.8□□□□□ -0.52
PDZRN3-203ENST00000462146 PPP6CO00743 305 aa11.8□□□□□ -0.52
PDZRN3-203ENST00000462146 BMP10O95393 424 aa11.8□□□□□ -0.52
PDZRN3-203ENST00000462146 SLC25A27O95847 323 aa11.8□□□□□ -0.52
PDZRN3-203ENST00000462146 CD247P20963 164 aa11.8□□□□□ -0.52
PDZRN3-203ENST00000462146 CD151P48509 253 aa11.8□□□□□ -0.52
PDZRN3-203ENST00000462146 KCNC1P48547 511 aa11.8□□□□□ -0.52
PDZRN3-203ENST00000462146 SCAPQ12770 1279 aa11.8□□□□□ -0.52
PDZRN3-203ENST00000462146 PRPSAP1Q14558 356 aa11.8□□□□□ -0.52
PDZRN3-203ENST00000462146 ACBD5Q5T8D3 534 aaPredicted RBP11.8□□□□□ -0.52
PDZRN3-203ENST00000462146 RWDD4Q6NW29 188 aaKnown RBP11.8□□□□□ -0.52
PDZRN3-203ENST00000462146 ERMP1Q7Z2K6 904 aa11.8□□□□□ -0.52
PDZRN3-203ENST00000462146 ZNF554Q86TJ5 538 aa11.8□□□□□ -0.52
PDZRN3-203ENST00000462146 BBS5Q8N3I7 341 aa11.8□□□□□ -0.52
PDZRN3-203ENST00000462146 ANKFN1Q8N957 763 aa11.8□□□□□ -0.52
PDZRN3-203ENST00000462146 ZMIZ2Q8NF64 920 aa11.8□□□□□ -0.52
PDZRN3-203ENST00000462146 OR2T34Q8NGX1 318 aa11.8□□□□□ -0.52
PDZRN3-203ENST00000462146 OR2T3Q8NH03 318 aa11.8□□□□□ -0.52
PDZRN3-203ENST00000462146 TMEM40Q8WWA1 233 aa11.8□□□□□ -0.52
PDZRN3-203ENST00000462146 SMOQ99835 787 aa11.8□□□□□ -0.52
PDZRN3-203ENST00000462146 CLEC11AQ9Y240 323 aa11.8□□□□□ -0.52
PDZRN3-203ENST00000462146 SQORQ9Y6N5 450 aa11.8□□□□□ -0.52
PDZRN3-203ENST00000462146 NR5A2O00482 541 aa11.8□□□□□ -0.52
PDZRN3-203ENST00000462146 IPO13O94829 963 aaKnown RBP11.8□□□□□ -0.52
PDZRN3-203ENST00000462146 PSMD7P51665 324 aa11.8□□□□□ -0.52
PDZRN3-203ENST00000462146 SLC5A3P53794 718 aa11.8□□□□□ -0.52
PDZRN3-203ENST00000462146 DNAJB13P59910 316 aa11.8□□□□□ -0.52
PDZRN3-203ENST00000462146 PFKPQ01813 784 aa11.8□□□□□ -0.52
PDZRN3-203ENST00000462146 MAPRE2Q15555 327 aa11.8□□□□□ -0.52
PDZRN3-203ENST00000462146 UGP2Q16851 508 aa11.8□□□□□ -0.52
PDZRN3-203ENST00000462146 SAMD4BQ5PRF9 694 aaKnown RBP11.8□□□□□ -0.52
PDZRN3-203ENST00000462146 TBCELQ5QJ74 424 aa11.8□□□□□ -0.52
PDZRN3-203ENST00000462146 TTC33Q6PID6 262 aaPredicted RBP11.8□□□□□ -0.52
PDZRN3-203ENST00000462146 DHRS4L2Q6PKH6 230 aa11.8□□□□□ -0.52
PDZRN3-203ENST00000462146 CHST15Q7LFX5 561 aaPredicted RBP11.8□□□□□ -0.52
PDZRN3-203ENST00000462146 ANKRD23Q86SG2 305 aa11.8□□□□□ -0.52
PDZRN3-203ENST00000462146 FAM35AQ86V20 835 aa11.8□□□□□ -0.52
PDZRN3-203ENST00000462146 C2CD4AQ8NCU7 369 aaPredicted RBP11.8□□□□□ -0.52
PDZRN3-203ENST00000462146 MIPOL1Q8TD10 442 aa11.8□□□□□ -0.52
PDZRN3-203ENST00000462146 LZICQ8WZA0 190 aa11.8□□□□□ -0.52
PDZRN3-203ENST00000462146 EXT2Q93063 718 aa11.8□□□□□ -0.52
PDZRN3-203ENST00000462146 DUS3LQ96G46 650 aaKnown RBP11.8□□□□□ -0.52
PDZRN3-203ENST00000462146 ZNF560Q96MR9 790 aa11.8□□□□□ -0.52
PDZRN3-203ENST00000462146 BIRC8Q96P09 236 aa11.8□□□□□ -0.52
PDZRN3-203ENST00000462146 TCF12Q99081 682 aa11.8□□□□□ -0.52
PDZRN3-203ENST00000462146 OSBPL6Q9BZF3 934 aa11.8□□□□□ -0.52
PDZRN3-203ENST00000462146 SIK2Q9H0K1 926 aa11.8□□□□□ -0.52
PDZRN3-203ENST00000462146 GSTO2Q9H4Y5 243 aa11.8□□□□□ -0.52
PDZRN3-203ENST00000462146 WDCPQ9H6R7 721 aa11.8□□□□□ -0.52
PDZRN3-203ENST00000462146 NDFIP2Q9NV92 336 aa11.8□□□□□ -0.52
PDZRN3-203ENST00000462146 FBXO5Q9UKT4 447 aa11.8□□□□□ -0.52
PDZRN3-203ENST00000462146 TCAF1Q9Y4C2 921 aa11.8□□□□□ -0.52
PDZRN3-203ENST00000462146 A0A0G2JLL6 359 aaPredicted RBP11.79□□□□□ -0.52
PDZRN3-203ENST00000462146 GPR32O75388 356 aa11.79□□□□□ -0.52
PDZRN3-203ENST00000462146 MAPK10P53779 464 aa11.79□□□□□ -0.52
PDZRN3-203ENST00000462146 SLC12A2P55011 1212 aa11.79□□□□□ -0.52
PDZRN3-203ENST00000462146 CDH13P55290 713 aa11.79□□□□□ -0.52
PDZRN3-203ENST00000462146 TUBA4AP68366 448 aa11.79□□□□□ -0.52
PDZRN3-203ENST00000462146 PMS2P3Q13401 168 aa11.79□□□□□ -0.52
PDZRN3-203ENST00000462146 PCSK7Q16549 785 aa11.79□□□□□ -0.52
PDZRN3-203ENST00000462146 FAM45BPQ6NSW5 357 aa11.79□□□□□ -0.52
PDZRN3-203ENST00000462146 NOTUMQ6P988 496 aa11.79□□□□□ -0.52
PDZRN3-203ENST00000462146 PRRT2Q7Z6L0 340 aaPredicted RBP11.79□□□□□ -0.52
PDZRN3-203ENST00000462146 SHCBP1Q8NEM2 672 aa11.79□□□□□ -0.52
PDZRN3-203ENST00000462146 PPHLN1Q8NEY8 458 aaKnown RBP11.79□□□□□ -0.52
PDZRN3-203ENST00000462146 PPTC7Q8NI37 304 aa11.79□□□□□ -0.52
PDZRN3-203ENST00000462146 FAM45AQ8TCE6 357 aa11.79□□□□□ -0.52
PDZRN3-203ENST00000462146 HM13Q8TCT9 377 aa11.79□□□□□ -0.52
PDZRN3-203ENST00000462146 KCTD13Q8WZ19 329 aa11.79□□□□□ -0.52
PDZRN3-203ENST00000462146 SLC9A7Q96T83 725 aa11.79□□□□□ -0.52
PDZRN3-203ENST00000462146 SLC25A23Q9BV35 468 aa11.79□□□□□ -0.52
PDZRN3-203ENST00000462146 ADI1Q9BV57 179 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms