RNA–Protein interactions for RNA: ENST00000409472.5

SCAMP4-202, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 2 BASIC

Gene SCAMP4, Length 2,394 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-202ENST00000409472 KCNA5P22460 613 aa15.29■□□□□ 0.04
SCAMP4-202ENST00000409472 RPS24P62847 133 aaKnown RBP15.29■□□□□ 0.04
SCAMP4-202ENST00000409472 HTRA3P83110 453 aa15.29■□□□□ 0.04
SCAMP4-202ENST00000409472 RALGPS1Q5JS13 557 aa15.29■□□□□ 0.04
SCAMP4-202ENST00000409472 EPGNQ6UW88 154 aa15.29■□□□□ 0.04
SCAMP4-202ENST00000409472 RNF135Q8IUD6 432 aa15.29■□□□□ 0.04
SCAMP4-202ENST00000409472 LRRC49Q8IUZ0 686 aa15.29■□□□□ 0.04
SCAMP4-202ENST00000409472 ENDOVQ8N8Q3 282 aaKnown RBP15.29■□□□□ 0.04
SCAMP4-202ENST00000409472 TXNDC5Q8NBS9 432 aaKnown RBP15.29■□□□□ 0.04
SCAMP4-202ENST00000409472 FBXO22Q8NEZ5 403 aa15.29■□□□□ 0.04
SCAMP4-202ENST00000409472 ZNF296Q8WUU4 475 aaPredicted RBP15.29■□□□□ 0.04
SCAMP4-202ENST00000409472 PTCD2Q8WV60 388 aaKnown RBP15.29■□□□□ 0.04
SCAMP4-202ENST00000409472 TADA1Q96BN2 335 aa15.29■□□□□ 0.04
SCAMP4-202ENST00000409472 EXOC2Q96KP1 924 aa15.29■□□□□ 0.04
SCAMP4-202ENST00000409472 SPATA17Q96L03 361 aa15.29■□□□□ 0.04
SCAMP4-202ENST00000409472 PRICKLE1Q96MT3 831 aaPredicted RBP15.29■□□□□ 0.04
SCAMP4-202ENST00000409472 SIKE1Q9BRV8 207 aa15.29■□□□□ 0.04
SCAMP4-202ENST00000409472 FAM192AQ9GZU8 254 aa15.29■□□□□ 0.04
SCAMP4-202ENST00000409472 PDFQ9HBH1 243 aa15.29■□□□□ 0.04
SCAMP4-202ENST00000409472 DLGAP2Q9P1A6 1054 aa15.29■□□□□ 0.04
SCAMP4-202ENST00000409472 FNIP2Q9P278 1114 aa15.29■□□□□ 0.04
SCAMP4-202ENST00000409472 ANKRD6Q9Y2G4 727 aa15.29■□□□□ 0.04
SCAMP4-202ENST00000409472 MICAL3Q7RTP6 2002 aa15.28■□□□□ 0.04
SCAMP4-202ENST00000409472 HEATR9A2RTY3 570 aa15.28■□□□□ 0.04
SCAMP4-202ENST00000409472 DCXO43602 365 aa15.28■□□□□ 0.04
SCAMP4-202ENST00000409472 SEC24AO95486 1093 aa15.28■□□□□ 0.04
SCAMP4-202ENST00000409472 HOXD9P28356 352 aaPredicted RBP15.28■□□□□ 0.04
SCAMP4-202ENST00000409472 OR1D2P34982 312 aa15.28■□□□□ 0.04
SCAMP4-202ENST00000409472 RGRP47804 291 aa15.28■□□□□ 0.04
SCAMP4-202ENST00000409472 SH3BGRP55822 239 aaPredicted RBP15.28■□□□□ 0.04
SCAMP4-202ENST00000409472 CSHL1Q14406 222 aa15.28■□□□□ 0.04
SCAMP4-202ENST00000409472 UGP2Q16851 508 aa15.28■□□□□ 0.04
SCAMP4-202ENST00000409472 LIPMQ5VYY2 423 aa15.28■□□□□ 0.04
SCAMP4-202ENST00000409472 PIM3Q86V86 326 aa15.28■□□□□ 0.04
SCAMP4-202ENST00000409472 TMPRSS6Q8IU80 811 aa15.28■□□□□ 0.04
SCAMP4-202ENST00000409472 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP15.28■□□□□ 0.04
SCAMP4-202ENST00000409472 DTX3LQ8TDB6 740 aa15.28■□□□□ 0.04
SCAMP4-202ENST00000409472 ANKRD49Q8WVL7 239 aa15.28■□□□□ 0.04
SCAMP4-202ENST00000409472 SEPT8Q92599 483 aa15.28■□□□□ 0.04
SCAMP4-202ENST00000409472 THTPAQ9BU02 230 aa15.28■□□□□ 0.04
SCAMP4-202ENST00000409472 IGSF5Q9NSI5 407 aa15.28■□□□□ 0.04
SCAMP4-202ENST00000409472 OLA1Q9NTK5 396 aaKnown RBP15.28■□□□□ 0.04
SCAMP4-202ENST00000409472 ATXN10Q9UBB4 475 aa15.28■□□□□ 0.04
SCAMP4-202ENST00000409472 ZDHHC2Q9UIJ5 367 aa15.28■□□□□ 0.04
SCAMP4-202ENST00000409472 ARL5AQ9Y689 179 aa15.28■□□□□ 0.04
SCAMP4-202ENST00000409472 COL4A6Q14031 1691 aa15.28■□□□□ 0.04
SCAMP4-202ENST00000409472 TMEM114B3SHH9 223 aa15.28■□□□□ 0.04
SCAMP4-202ENST00000409472 LDB2O43679 373 aa15.28■□□□□ 0.04
SCAMP4-202ENST00000409472 PENKP01210 267 aaPredicted RBP15.28■□□□□ 0.04
SCAMP4-202ENST00000409472 PRSS56P0CW18 603 aa15.28■□□□□ 0.04
SCAMP4-202ENST00000409472 BFSP2Q13515 415 aa15.28■□□□□ 0.04
SCAMP4-202ENST00000409472 RCN1Q15293 331 aa15.28■□□□□ 0.04
SCAMP4-202ENST00000409472 MYLK4Q86YV6 388 aaPredicted RBP15.28■□□□□ 0.04
SCAMP4-202ENST00000409472 ULK2Q8IYT8 1036 aa15.28■□□□□ 0.04
SCAMP4-202ENST00000409472 SLAIN1Q8ND83 568 aa15.28■□□□□ 0.04
SCAMP4-202ENST00000409472 DNAJC9Q8WXX5 260 aa15.28■□□□□ 0.04
SCAMP4-202ENST00000409472 HDAC10Q969S8 669 aa15.28■□□□□ 0.04
SCAMP4-202ENST00000409472 UBE2OQ9C0C9 1292 aaKnown RBP15.28■□□□□ 0.04
SCAMP4-202ENST00000409472 VPS45Q9NRW7 570 aa15.28■□□□□ 0.04
SCAMP4-202ENST00000409472 DNAAF2Q9NVR5 837 aaKnown RBP15.28■□□□□ 0.04
SCAMP4-202ENST00000409472 SLC7A8Q9UHI5 535 aa15.28■□□□□ 0.04
SCAMP4-202ENST00000409472 WASF2Q9Y6W5 498 aa15.28■□□□□ 0.04
SCAMP4-202ENST00000409472 MROH6A6NGR9 719 aa15.27■□□□□ 0.04
SCAMP4-202ENST00000409472 PRAMEF11O60813 436 aa15.27■□□□□ 0.04
SCAMP4-202ENST00000409472 KLKB1P03952 638 aa15.27■□□□□ 0.04
SCAMP4-202ENST00000409472 PAMP19021 973 aa15.27■□□□□ 0.04
SCAMP4-202ENST00000409472 EPHA3P29320 983 aa15.27■□□□□ 0.04
SCAMP4-202ENST00000409472 HADHAP40939 763 aa15.27■□□□□ 0.04
SCAMP4-202ENST00000409472 IL10RBQ08334 325 aa15.27■□□□□ 0.04
SCAMP4-202ENST00000409472 TMC7Q7Z402 723 aa15.27■□□□□ 0.04
SCAMP4-202ENST00000409472 EFCAB3Q8N7B9 438 aa15.27■□□□□ 0.04
SCAMP4-202ENST00000409472 OR6P1Q8NGX9 317 aa15.27■□□□□ 0.04
SCAMP4-202ENST00000409472 BLOC1S5Q8TDH9 187 aa15.27■□□□□ 0.04
SCAMP4-202ENST00000409472 NRG4Q8WWG1 115 aa15.27■□□□□ 0.04
SCAMP4-202ENST00000409472 PANX3Q96QZ0 392 aa15.27■□□□□ 0.04
SCAMP4-202ENST00000409472 CFHR5Q9BXR6 569 aa15.27■□□□□ 0.04
SCAMP4-202ENST00000409472 NUF2Q9BZD4 464 aa15.27■□□□□ 0.04
SCAMP4-202ENST00000409472 PRKD2Q9BZL6 878 aa15.27■□□□□ 0.04
SCAMP4-202ENST00000409472 DRC3Q9H069 523 aa15.27■□□□□ 0.04
SCAMP4-202ENST00000409472 STN1Q9H668 368 aaKnown RBP15.27■□□□□ 0.04
SCAMP4-202ENST00000409472 CYP4F12Q9HCS2 524 aa15.27■□□□□ 0.04
SCAMP4-202ENST00000409472 GKN1Q9NS71 199 aa15.27■□□□□ 0.04
SCAMP4-202ENST00000409472 TMCO1Q9UM00 188 aa15.27■□□□□ 0.04
SCAMP4-202ENST00000409472 ZFP37Q9Y6Q3 630 aaPredicted RBP15.27■□□□□ 0.04
SCAMP4-202ENST00000409472 LOC100653049A0A140TA62 436 aa15.27■□□□□ 0.03
SCAMP4-202ENST00000409472 MAP3K13O43283 966 aa15.27■□□□□ 0.03
SCAMP4-202ENST00000409472 GRID2O43424 1007 aa15.27■□□□□ 0.03
SCAMP4-202ENST00000409472 KRT34O76011 436 aa15.27■□□□□ 0.03
SCAMP4-202ENST00000409472 KLHL2O95198 593 aa15.27■□□□□ 0.03
SCAMP4-202ENST00000409472 PTDSS1P48651 473 aaKnown RBP15.27■□□□□ 0.03
SCAMP4-202ENST00000409472 PLK1P53350 603 aa15.27■□□□□ 0.03
SCAMP4-202ENST00000409472 CDKN2DP55273 166 aa15.27■□□□□ 0.03
SCAMP4-202ENST00000409472 RING1Q06587 406 aa15.27■□□□□ 0.03
SCAMP4-202ENST00000409472 SEMA3AQ14563 771 aa15.27■□□□□ 0.03
SCAMP4-202ENST00000409472 MYBPC3Q14896 1274 aa15.27■□□□□ 0.03
SCAMP4-202ENST00000409472 PARP15Q460N3 678 aa15.27■□□□□ 0.03
SCAMP4-202ENST00000409472 CFAP157Q5JU67 520 aa15.27■□□□□ 0.03
SCAMP4-202ENST00000409472 RNF220Q5VTB9 566 aa15.27■□□□□ 0.03
SCAMP4-202ENST00000409472 TMEM198Q66K66 360 aa15.27■□□□□ 0.03
SCAMP4-202ENST00000409472 TMEM207Q6UWW9 146 aa15.27■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms