RNA–Protein interactions for RNA: ENST00000389416.8

PTPRN2-202, Transcript of protein tyrosine phosphatase, receptor type N2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRN2, Length 4,692 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN2-202ENST00000389416 SOX13Q9UN79 622 aa13.18□□□□□ -0.3
PTPRN2-202ENST00000389416 INSL5Q9Y5Q6 135 aa13.18□□□□□ -0.3
PTPRN2-202ENST00000389416 FOXO6A8MYZ6 492 aa13.18□□□□□ -0.3
PTPRN2-202ENST00000389416 INSIG1O15503 277 aa13.18□□□□□ -0.3
PTPRN2-202ENST00000389416 SEC22BO75396 215 aa13.18□□□□□ -0.3
PTPRN2-202ENST00000389416 CPSF4O95639 269 aaKnown RBP13.18□□□□□ -0.3
PTPRN2-202ENST00000389416 ALADP13716 330 aa13.18□□□□□ -0.3
PTPRN2-202ENST00000389416 ALDH9A1P49189 494 aa13.18□□□□□ -0.3
PTPRN2-202ENST00000389416 PITX1P78337 314 aaPredicted RBP13.18□□□□□ -0.3
PTPRN2-202ENST00000389416 CAP1Q01518 475 aa13.18□□□□□ -0.3
PTPRN2-202ENST00000389416 BST1Q10588 318 aa13.18□□□□□ -0.3
PTPRN2-202ENST00000389416 ABRQ12979 859 aa13.18□□□□□ -0.3
PTPRN2-202ENST00000389416 TRIP10Q15642 601 aa13.18□□□□□ -0.3
PTPRN2-202ENST00000389416 ATP6AP1LQ52LC2 224 aa13.18□□□□□ -0.3
PTPRN2-202ENST00000389416 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.18□□□□□ -0.33e-9■■■■■ 70.2
PTPRN2-202ENST00000389416 GRASPQ7Z6J2 395 aaPredicted RBP13.18□□□□□ -0.3
PTPRN2-202ENST00000389416 TRABD2AQ86V40 505 aa13.18□□□□□ -0.3
PTPRN2-202ENST00000389416 SLC35B2Q8TB61 432 aa13.18□□□□□ -0.3
PTPRN2-202ENST00000389416 TRPC4APQ8TEL6 797 aa13.18□□□□□ -0.3
PTPRN2-202ENST00000389416 KLQ9UEF7 1012 aa13.18□□□□□ -0.3
PTPRN2-202ENST00000389416 SCML2Q9UQR0 700 aa13.18□□□□□ -0.3
PTPRN2-202ENST00000389416 DDX60Q8IY21 1712 aaKnown RBP13.18□□□□□ -0.3
PTPRN2-202ENST00000389416 SCN7AQ01118 1682 aa13.18□□□□□ -0.3
PTPRN2-202ENST00000389416 MYO1GB0I1T2 1018 aa13.18□□□□□ -0.3
PTPRN2-202ENST00000389416 PITPNM1O00562 1244 aa13.18□□□□□ -0.3
PTPRN2-202ENST00000389416 EDN1P05305 212 aa13.18□□□□□ -0.3
PTPRN2-202ENST00000389416 PROZP22891 400 aa13.18□□□□□ -0.3
PTPRN2-202ENST00000389416 ILF2Q12905 390 aaKnown RBP13.18□□□□□ -0.3
PTPRN2-202ENST00000389416 CRTC3Q6UUV7 619 aa13.18□□□□□ -0.3
PTPRN2-202ENST00000389416 TEX9Q8N6V9 391 aa13.18□□□□□ -0.3
PTPRN2-202ENST00000389416 NPY6RQ99463 290 aa13.18□□□□□ -0.3
PTPRN2-202ENST00000389416 RBBP8Q99708 897 aa13.18□□□□□ -0.3
PTPRN2-202ENST00000389416 NMUR1Q9HB89 426 aa13.18□□□□□ -0.3
PTPRN2-202ENST00000389416 SLCO1B3Q9NPD5 702 aa13.18□□□□□ -0.3
PTPRN2-202ENST00000389416 MAN1C1Q9NR34 630 aa13.18□□□□□ -0.3
PTPRN2-202ENST00000389416 ZSCAN9O15535 394 aaPredicted RBP13.18□□□□□ -0.3
PTPRN2-202ENST00000389416 RNASEH2AO75792 299 aaKnown RBP13.18□□□□□ -0.3
PTPRN2-202ENST00000389416 ATP5F1P24539 256 aaPredicted RBP13.18□□□□□ -0.3
PTPRN2-202ENST00000389416 KRT72Q14CN4 511 aa13.18□□□□□ -0.3
PTPRN2-202ENST00000389416 LRRC73Q5JTD7 316 aa13.18□□□□□ -0.3
PTPRN2-202ENST00000389416 CEP70Q8NHQ1 597 aa13.18□□□□□ -0.3
PTPRN2-202ENST00000389416 CKAP2Q8WWK9 683 aa13.18□□□□□ -0.3
PTPRN2-202ENST00000389416 EME1Q96AY2 570 aa13.18□□□□□ -0.3
PTPRN2-202ENST00000389416 MTFMTQ96DP5 389 aaKnown RBP13.18□□□□□ -0.3
PTPRN2-202ENST00000389416 RAD9AQ99638 391 aa13.18□□□□□ -0.3
PTPRN2-202ENST00000389416 PIF1Q9H611 641 aa13.18□□□□□ -0.3
PTPRN2-202ENST00000389416 GPSM3Q9Y4H4 160 aa13.18□□□□□ -0.3
PTPRN2-202ENST00000389416 PRMT5O14744 637 aaPredicted RBP13.17□□□□□ -0.3
PTPRN2-202ENST00000389416 KRT16P08779 473 aa13.17□□□□□ -0.3
PTPRN2-202ENST00000389416 MAPK1P28482 360 aa13.17□□□□□ -0.3
PTPRN2-202ENST00000389416 NRIP1P48552 1158 aa13.17□□□□□ -0.3
PTPRN2-202ENST00000389416 CDH13P55290 713 aa13.17□□□□□ -0.3
PTPRN2-202ENST00000389416 RBFAQ8N0V3 343 aa13.17□□□□□ -0.3
PTPRN2-202ENST00000389416 MECRQ9BV79 373 aa13.17□□□□□ -0.3
PTPRN2-202ENST00000389416 GPR88Q9GZN0 384 aa13.17□□□□□ -0.3
PTPRN2-202ENST00000389416 YY1AP1Q9H869 796 aa13.17□□□□□ -0.3
PTPRN2-202ENST00000389416 RAD18Q9NS91 495 aa13.17□□□□□ -0.3
PTPRN2-202ENST00000389416 HS3ST4Q9Y661 456 aa13.17□□□□□ -0.3
PTPRN2-202ENST00000389416 TMEM63AO94886 807 aa13.17□□□□□ -0.3
PTPRN2-202ENST00000389416 PRKAA2P54646 552 aa13.17□□□□□ -0.3
PTPRN2-202ENST00000389416 SLC10A7Q0GE19 358 aa13.17□□□□□ -0.3
PTPRN2-202ENST00000389416 NCBP2-AS2Q69YL0 99 aa13.17□□□□□ -0.3
PTPRN2-202ENST00000389416 IL27RAQ6UWB1 636 aa13.17□□□□□ -0.3
PTPRN2-202ENST00000389416 DNAJC14Q6Y2X3 702 aaPredicted RBP13.17□□□□□ -0.3
PTPRN2-202ENST00000389416 MIER2Q8N344 545 aa13.17□□□□□ -0.3
PTPRN2-202ENST00000389416 RIPOR3Q96MK2 946 aa13.17□□□□□ -0.3
PTPRN2-202ENST00000389416 DPY30Q9C005 99 aa13.17□□□□□ -0.3
PTPRN2-202ENST00000389416 CCDC90BQ9GZT6 254 aa13.17□□□□□ -0.3
PTPRN2-202ENST00000389416 CCDC167Q9P0B6 97 aa13.17□□□□□ -0.3
PTPRN2-202ENST00000389416 POLG2Q9UHN1 485 aa13.17□□□□□ -0.3
PTPRN2-202ENST00000389416 ACTL7BQ9Y614 415 aa13.17□□□□□ -0.3
PTPRN2-202ENST00000389416 SIPA1L3O60292 1781 aaPredicted RBP13.17□□□□□ -0.3
PTPRN2-202ENST00000389416 TTC24A2A3L6 582 aaPredicted RBP13.17□□□□□ -0.3
PTPRN2-202ENST00000389416 NDUFS2O75306 463 aa13.17□□□□□ -0.3
PTPRN2-202ENST00000389416 CDK14O94921 469 aa13.17□□□□□ -0.3
PTPRN2-202ENST00000389416 CSKP41240 450 aa13.17□□□□□ -0.3
PTPRN2-202ENST00000389416 PSMD8P48556 350 aa13.17□□□□□ -0.3
PTPRN2-202ENST00000389416 DRICH1Q6PGQ1 229 aaPredicted RBP13.17□□□□□ -0.3
PTPRN2-202ENST00000389416 CMTM8Q8IZV2 173 aa13.17□□□□□ -0.3
PTPRN2-202ENST00000389416 ACMSDQ8TDX5 336 aa13.17□□□□□ -0.3
PTPRN2-202ENST00000389416 NDRG2Q9UN36 371 aaKnown RBP13.17□□□□□ -0.3
PTPRN2-202ENST00000389416 SCN9AQ15858 1988 aa13.17□□□□□ -0.3
PTPRN2-202ENST00000389416 TMEM114B3SHH9 223 aa13.16□□□□□ -0.3
PTPRN2-202ENST00000389416 INPPL1O15357 1258 aa13.16□□□□□ -0.3
PTPRN2-202ENST00000389416 RPP40O75818 363 aaKnown RBP13.16□□□□□ -0.3
PTPRN2-202ENST00000389416 RPN2P04844 631 aa13.16□□□□□ -0.3
PTPRN2-202ENST00000389416 FBXW4P57775 412 aa13.16□□□□□ -0.3
PTPRN2-202ENST00000389416 SLC25A11Q02978 314 aaKnown RBP13.16□□□□□ -0.3
PTPRN2-202ENST00000389416 GAD2Q05329 585 aa13.16□□□□□ -0.3
PTPRN2-202ENST00000389416 DLG2Q15700 870 aa13.16□□□□□ -0.3
PTPRN2-202ENST00000389416 WDTC1Q8N5D0 677 aa13.16□□□□□ -0.3
PTPRN2-202ENST00000389416 PIWIL2Q8TC59 973 aaKnown RBP13.16□□□□□ -0.3
PTPRN2-202ENST00000389416 SLC44A1Q8WWI5 657 aa13.16□□□□□ -0.3
PTPRN2-202ENST00000389416 LINGO1Q96FE5 620 aa13.16□□□□□ -0.3
PTPRN2-202ENST00000389416 DNAJC1Q96KC8 554 aaKnown RBP13.16□□□□□ -0.3
PTPRN2-202ENST00000389416 WRAP53Q9BUR4 548 aaKnown RBP13.16□□□□□ -0.3
PTPRN2-202ENST00000389416 OSBPL2Q9H1P3 480 aa13.16□□□□□ -0.3
PTPRN2-202ENST00000389416 SMOC2Q9H3U7 446 aa13.16□□□□□ -0.3
PTPRN2-202ENST00000389416 MIEF1Q9NQG6 463 aa13.16□□□□□ -0.3
PTPRN2-202ENST00000389416 TIAM2Q8IVF5 1701 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms