RNA–Protein interactions for RNA: ENST00000368215.7

PTPRK-206, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRK, Length 4,651 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-206ENST00000368215 GRIA3P42263 894 aa8.51□□□□□ -1.05
PTPRK-206ENST00000368215 RALGDSQ12967 914 aa8.51□□□□□ -1.05
PTPRK-206ENST00000368215 FRG1Q14331 258 aaKnown RBP8.51□□□□□ -1.05
PTPRK-206ENST00000368215 OTUD3Q5T2D3 398 aaPredicted RBP8.51□□□□□ -1.05
PTPRK-206ENST00000368215 STXBP5Q5T5C0 1151 aa8.51□□□□□ -1.05
PTPRK-206ENST00000368215 TREML1Q86YW5 311 aa8.51□□□□□ -1.05
PTPRK-206ENST00000368215 IFNLR1Q8IU57 520 aaPredicted RBP8.51□□□□□ -1.05
PTPRK-206ENST00000368215 FBXW8Q8N3Y1 598 aa8.51□□□□□ -1.05
PTPRK-206ENST00000368215 STAG3L4Q8TBR4 150 aa8.51□□□□□ -1.05
PTPRK-206ENST00000368215 DNAJC1Q96KC8 554 aaKnown RBP8.51□□□□□ -1.05
PTPRK-206ENST00000368215 OR52B2Q96RD2 323 aa8.51□□□□□ -1.05
PTPRK-206ENST00000368215 PRPF18Q99633 342 aaKnown RBP8.51□□□□□ -1.05
PTPRK-206ENST00000368215 C1orf50Q9BV19 199 aa8.51□□□□□ -1.05
PTPRK-206ENST00000368215 RGS17Q9UGC6 210 aaPredicted RBP8.51□□□□□ -1.05
PTPRK-206ENST00000368215 ZMYND8Q9ULU4 1186 aaPredicted RBP8.51□□□□□ -1.05
PTPRK-206ENST00000368215 PCDHB9Q9Y5E1 797 aa8.51□□□□□ -1.05
PTPRK-206ENST00000368215 COL24A1Q17RW2 1714 aa8.51□□□□□ -1.05
PTPRK-206ENST00000368215 MAGEC1O60732 1142 aa8.51□□□□□ -1.05
PTPRK-206ENST00000368215 ALDOAP04075 364 aaKnown RBP8.51□□□□□ -1.05
PTPRK-206ENST00000368215 PRKCGP05129 697 aa8.51□□□□□ -1.05
PTPRK-206ENST00000368215 SPATA31D3P0C874 917 aa8.51□□□□□ -1.05
PTPRK-206ENST00000368215 IL4RP24394 825 aa8.51□□□□□ -1.05
PTPRK-206ENST00000368215 EEF1DP29692 281 aaKnown RBP8.51□□□□□ -1.05
PTPRK-206ENST00000368215 CCNG1P51959 295 aa8.51□□□□□ -1.05
PTPRK-206ENST00000368215 IL2P60568 153 aa8.51□□□□□ -1.05
PTPRK-206ENST00000368215 SATB1Q01826 763 aa8.51□□□□□ -1.05
PTPRK-206ENST00000368215 SLC10A7Q0GE19 358 aa8.51□□□□□ -1.05
PTPRK-206ENST00000368215 PAFAH1B3Q15102 231 aaKnown RBP8.51□□□□□ -1.05
PTPRK-206ENST00000368215 TTLL9Q3SXZ7 439 aa8.51□□□□□ -1.05
PTPRK-206ENST00000368215 AASDHQ4L235 1098 aaPredicted RBP8.51□□□□□ -1.05
PTPRK-206ENST00000368215 LRRC23Q53EV4 343 aaPredicted RBP8.51□□□□□ -1.05
PTPRK-206ENST00000368215 LDLRAD1Q5T700 205 aa8.51□□□□□ -1.05
PTPRK-206ENST00000368215 CGB2Q6NT52 195 aa8.51□□□□□ -1.05
PTPRK-206ENST00000368215 RETSATQ6NUM9 610 aa8.51□□□□□ -1.05
PTPRK-206ENST00000368215 ZYG11AQ6WRX3 759 aa8.51□□□□□ -1.05
PTPRK-206ENST00000368215 SPATA31D4Q6ZUB0 917 aa8.51□□□□□ -1.05
PTPRK-206ENST00000368215 DSELQ8IZU8 1212 aa8.51□□□□□ -1.05
PTPRK-206ENST00000368215 CDYL2Q8N8U2 506 aa8.51□□□□□ -1.05
PTPRK-206ENST00000368215 FCRL3Q96P31 734 aaPredicted RBP8.51□□□□□ -1.05
PTPRK-206ENST00000368215 CYP2S1Q96SQ9 504 aa8.51□□□□□ -1.05
PTPRK-206ENST00000368215 YME1L1Q96TA2 773 aa8.51□□□□□ -1.05
PTPRK-206ENST00000368215 MLPHQ9BV36 600 aaPredicted RBP8.51□□□□□ -1.05
PTPRK-206ENST00000368215 SLC25A51Q9H1U9 297 aa8.51□□□□□ -1.05
PTPRK-206ENST00000368215 ACTR8Q9H981 624 aa8.51□□□□□ -1.05
PTPRK-206ENST00000368215 PAPOLBQ9NRJ5 636 aaKnown RBP8.51□□□□□ -1.05
PTPRK-206ENST00000368215 SNX5Q9Y5X3 404 aa8.51□□□□□ -1.05
PTPRK-206ENST00000368215 DLEC1Q9Y238 1755 aa8.5□□□□□ -1.05
PTPRK-206ENST00000368215 TMEM233B4DJY2 109 aa8.5□□□□□ -1.05
PTPRK-206ENST00000368215 SH3BGRLO75368 114 aa8.5□□□□□ -1.05
PTPRK-206ENST00000368215 IPO13O94829 963 aaKnown RBP8.5□□□□□ -1.05
PTPRK-206ENST00000368215 MYO1DO94832 1006 aa8.5□□□□□ -1.05
PTPRK-206ENST00000368215 FKBP9O95302 570 aa8.5□□□□□ -1.05
PTPRK-206ENST00000368215 AHSGP02765 367 aa8.5□□□□□ -1.05
PTPRK-206ENST00000368215 BTG3Q14201 252 aaPredicted RBP8.5□□□□□ -1.05
PTPRK-206ENST00000368215 IL27RAQ6UWB1 636 aa8.5□□□□□ -1.05
PTPRK-206ENST00000368215 FKBP9P1Q75LS8 142 aa8.5□□□□□ -1.05
PTPRK-206ENST00000368215 HERC6Q8IVU3 1022 aa8.5□□□□□ -1.05
PTPRK-206ENST00000368215 OLIG1Q8TAK6 271 aa8.5□□□□□ -1.05
PTPRK-206ENST00000368215 ERLEC1Q96DZ1 483 aa8.5□□□□□ -1.05
PTPRK-206ENST00000368215 KCTD14Q9BQ13 255 aaPredicted RBP8.5□□□□□ -1.05
PTPRK-206ENST00000368215 S100A14Q9HCY8 104 aa8.5□□□□□ -1.05
PTPRK-206ENST00000368215 DNAJC28Q9NX36 388 aa8.5□□□□□ -1.05
PTPRK-206ENST00000368215 LMCD1Q9NZU5 365 aa8.5□□□□□ -1.05
PTPRK-206ENST00000368215 EGFL7Q9UHF1 273 aa8.5□□□□□ -1.05
PTPRK-206ENST00000368215 PCDHGC4Q9Y5F7 938 aa8.5□□□□□ -1.05
PTPRK-206ENST00000368215 MYADML2A6NDP7 307 aa8.5□□□□□ -1.05
PTPRK-206ENST00000368215 CAPN8A6NHC0 703 aa8.5□□□□□ -1.05
PTPRK-206ENST00000368215 J3KR12 359 aa8.5□□□□□ -1.05
PTPRK-206ENST00000368215 PTGESO14684 152 aa8.5□□□□□ -1.05
PTPRK-206ENST00000368215 RHOQP17081 205 aa8.5□□□□□ -1.05
PTPRK-206ENST00000368215 LBPP18428 481 aa8.5□□□□□ -1.05
PTPRK-206ENST00000368215 NELFEP18615 380 aaKnown RBP8.5□□□□□ -1.05
PTPRK-206ENST00000368215 AFF1P51825 1210 aaKnown RBP8.5□□□□□ -1.05
PTPRK-206ENST00000368215 SMAD3P84022 425 aaKnown RBP8.5□□□□□ -1.05
PTPRK-206ENST00000368215 CYP51A1Q16850 503 aa8.5□□□□□ -1.05
PTPRK-206ENST00000368215 SAMD4BQ5PRF9 694 aaKnown RBP8.5□□□□□ -1.05
PTPRK-206ENST00000368215 MARCH8Q5T0T0 291 aa8.5□□□□□ -1.05
PTPRK-206ENST00000368215 RPS27LQ71UM5 84 aaKnown RBP8.5□□□□□ -1.05
PTPRK-206ENST00000368215 PHTF2Q8N3S3 785 aa8.5□□□□□ -1.05
PTPRK-206ENST00000368215 OR56A4Q8NGH8 313 aa8.5□□□□□ -1.05
PTPRK-206ENST00000368215 ESAMQ96AP7 390 aa8.5□□□□□ -1.05
PTPRK-206ENST00000368215 ZNF778Q96MU6 729 aa8.5□□□□□ -1.05
PTPRK-206ENST00000368215 VPS45Q9NRW7 570 aa8.5□□□□□ -1.05
PTPRK-206ENST00000368215 KIF17Q9P2E2 1029 aa8.5□□□□□ -1.05
PTPRK-206ENST00000368215 LNPEPQ9UIQ6 1025 aa8.5□□□□□ -1.05
PTPRK-206ENST00000368215 AGO1Q9UL18 857 aaKnown RBP8.5□□□□□ -1.05
PTPRK-206ENST00000368215 EIF3LQ9Y262 564 aaKnown RBP8.5□□□□□ -1.05
PTPRK-206ENST00000368215 FFAR3O14843 346 aa8.5□□□□□ -1.05
PTPRK-206ENST00000368215 GPR42O15529 346 aa8.5□□□□□ -1.05
PTPRK-206ENST00000368215 FAM189A1O60320 539 aa8.5□□□□□ -1.05
PTPRK-206ENST00000368215 TBL1XO60907 577 aa8.5□□□□□ -1.05
PTPRK-206ENST00000368215 SLC7A2P52569 658 aa8.5□□□□□ -1.05
PTPRK-206ENST00000368215 DYNC1I2Q13409 638 aaKnown RBP8.5□□□□□ -1.05
PTPRK-206ENST00000368215 GTF2H3Q13889 308 aa8.5□□□□□ -1.05
PTPRK-206ENST00000368215 BOP1Q14137 746 aaKnown RBP8.5□□□□□ -1.05
PTPRK-206ENST00000368215 PLEKHG4Q58EX7 1191 aa8.5□□□□□ -1.05
PTPRK-206ENST00000368215 PPM1LQ5SGD2 360 aa8.5□□□□□ -1.05
PTPRK-206ENST00000368215 ARMC12Q5T9G4 340 aa8.5□□□□□ -1.05
PTPRK-206ENST00000368215 AGMOQ6ZNB7 445 aa8.5□□□□□ -1.05
PTPRK-206ENST00000368215 SH3KBP1Q96B97 665 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms