RNA–Protein interactions for RNA: ENST00000368021.7

USF1-203, Transcript of upstream transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USF1, Length 1,807 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-203ENST00000368021 SLC26A11Q86WA9 606 aa12.16□□□□□ -0.46
USF1-203ENST00000368021 CYP4X1Q8N118 509 aa12.16□□□□□ -0.46
USF1-203ENST00000368021 DDX51Q8N8A6 666 aaKnown RBP eCLIP12.16□□□□□ -0.46
USF1-203ENST00000368021 SERBP1Q8NC51 408 aaKnown RBP eCLIP12.16□□□□□ -0.46
USF1-203ENST00000368021 PPHLN1Q8NEY8 458 aaKnown RBP12.16□□□□□ -0.46
USF1-203ENST00000368021 DCAKDQ8WVC6 231 aa12.16□□□□□ -0.46
USF1-203ENST00000368021 E2F7Q96AV8 911 aa12.16□□□□□ -0.46
USF1-203ENST00000368021 RSPRY1Q96DX4 576 aa12.16□□□□□ -0.46
USF1-203ENST00000368021 IFT43Q96FT9 208 aa12.16□□□□□ -0.46
USF1-203ENST00000368021 TRIB3Q96RU7 358 aa12.16□□□□□ -0.46
USF1-203ENST00000368021 SCUBE2Q9NQ36 999 aa12.16□□□□□ -0.46
USF1-203ENST00000368021 CHRAC1Q9NRG0 131 aa12.16□□□□□ -0.46
USF1-203ENST00000368021 LHX3Q9UBR4 397 aa12.16□□□□□ -0.46
USF1-203ENST00000368021 TBK1Q9UHD2 729 aa12.16□□□□□ -0.46
USF1-203ENST00000368021 FBXO10Q9UK96 956 aa12.16□□□□□ -0.46
USF1-203ENST00000368021 CORO1CQ9ULV4 474 aaPredicted RBP12.16□□□□□ -0.46
USF1-203ENST00000368021 HS3ST2Q9Y278 367 aa12.16□□□□□ -0.46
USF1-203ENST00000368021 TTC24A2A3L6 582 aaPredicted RBP12.16□□□□□ -0.46
USF1-203ENST00000368021 HOXC11O43248 304 aaPredicted RBP12.16□□□□□ -0.46
USF1-203ENST00000368021 DCXO43602 365 aa12.16□□□□□ -0.46
USF1-203ENST00000368021 NARSO43776 548 aaKnown RBP12.16□□□□□ -0.46
USF1-203ENST00000368021 GJB3O75712 270 aa12.16□□□□□ -0.46
USF1-203ENST00000368021 NDST3O95803 873 aa12.16□□□□□ -0.46
USF1-203ENST00000368021 MT-CO1P00395 513 aa12.16□□□□□ -0.46
USF1-203ENST00000368021 ATXN1LP0C7T5 689 aaKnown RBP12.16□□□□□ -0.46
USF1-203ENST00000368021 PABPC1P11940 636 aaKnown RBP12.16□□□□□ -0.46
USF1-203ENST00000368021 HPDP32754 393 aaPredicted RBP12.16□□□□□ -0.46
USF1-203ENST00000368021 CHRNA4P43681 627 aa12.16□□□□□ -0.46
USF1-203ENST00000368021 MAPK8P45983 427 aa12.16□□□□□ -0.46
USF1-203ENST00000368021 CSNK1DP48730 415 aa12.16□□□□□ -0.46
USF1-203ENST00000368021 RHOAP61586 193 aa12.16□□□□□ -0.46
USF1-203ENST00000368021 PPP2R2AP63151 447 aa12.16□□□□□ -0.46
USF1-203ENST00000368021 HTR4Q13639 388 aa12.16□□□□□ -0.46
USF1-203ENST00000368021 NAA25Q14CX7 972 aa12.16□□□□□ -0.46
USF1-203ENST00000368021 TMED2Q15363 201 aa12.16□□□□□ -0.46
USF1-203ENST00000368021 DHCR24Q15392 516 aa12.16□□□□□ -0.46
USF1-203ENST00000368021 MARK2Q7KZI7 788 aaKnown RBP12.16□□□□□ -0.46
USF1-203ENST00000368021 EXOC3L1Q86VI1 746 aa12.16□□□□□ -0.46
USF1-203ENST00000368021 PARP9Q8IXQ6 854 aa12.16□□□□□ -0.46
USF1-203ENST00000368021 SLC44A3Q8N4M1 653 aa12.16□□□□□ -0.46
USF1-203ENST00000368021 TEX9Q8N6V9 391 aa12.16□□□□□ -0.46
USF1-203ENST00000368021 ZNF513Q8N8E2 541 aaPredicted RBP12.16□□□□□ -0.46
USF1-203ENST00000368021 ISG20Q96AZ6 181 aaKnown RBP12.16□□□□□ -0.46
USF1-203ENST00000368021 ZNF669Q96BR6 464 aaPredicted RBP12.16□□□□□ -0.46
USF1-203ENST00000368021 MFSD3Q96ES6 412 aa12.16□□□□□ -0.46
USF1-203ENST00000368021 CERS2Q96G23 380 aa12.16□□□□□ -0.46
USF1-203ENST00000368021 PLA2G2FQ9BZM2 168 aa12.16□□□□□ -0.46
USF1-203ENST00000368021 CNOT10Q9H9A5 744 aaKnown RBP12.16□□□□□ -0.46
USF1-203ENST00000368021 TCAF1Q9Y4C2 921 aa12.16□□□□□ -0.46
USF1-203ENST00000368021 IQANK1A0A1B0GTG1 560 aa12.15□□□□□ -0.46
USF1-203ENST00000368021 HEATR9A2RTY3 570 aa12.15□□□□□ -0.46
USF1-203ENST00000368021 CXorf49A8MYA2 514 aaPredicted RBP12.15□□□□□ -0.46
USF1-203ENST00000368021 PAPSS2O95340 614 aaPredicted RBP12.15□□□□□ -0.46
USF1-203ENST00000368021 CYP17A1P05093 508 aa12.15□□□□□ -0.46
USF1-203ENST00000368021 ALADP13716 330 aa12.15□□□□□ -0.46
USF1-203ENST00000368021 CA4P22748 312 aa12.15□□□□□ -0.46
USF1-203ENST00000368021 FCARP24071 287 aa12.15□□□□□ -0.46
USF1-203ENST00000368021 AP1S1P61966 158 aa12.15□□□□□ -0.46
USF1-203ENST00000368021 ROR2Q01974 943 aaKnown RBP12.15□□□□□ -0.46
USF1-203ENST00000368021 MGAT5Q09328 741 aa12.15□□□□□ -0.46
USF1-203ENST00000368021 TDGQ13569 410 aa12.15□□□□□ -0.46
USF1-203ENST00000368021 LAMB3Q13751 1172 aa12.15□□□□□ -0.46
USF1-203ENST00000368021 POU6F1Q14863 301 aa12.15□□□□□ -0.46
USF1-203ENST00000368021 FUT11Q495W5 492 aa12.15□□□□□ -0.46
USF1-203ENST00000368021 SIRPB2Q5JXA9 342 aa12.15□□□□□ -0.46
USF1-203ENST00000368021 NLRP9Q7RTR0 991 aa12.15□□□□□ -0.46
USF1-203ENST00000368021 KDELC2Q7Z4H8 507 aa12.15□□□□□ -0.46
USF1-203ENST00000368021 TRABD2AQ86V40 505 aa12.15□□□□□ -0.46
USF1-203ENST00000368021 CTAGE3PQ8IX95 158 aa12.15□□□□□ -0.46
USF1-203ENST00000368021 SLC25A41Q8N5S1 370 aa12.15□□□□□ -0.46
USF1-203ENST00000368021 PPM1NQ8N819 430 aa12.15□□□□□ -0.46
USF1-203ENST00000368021 LZICQ8WZA0 190 aa12.15□□□□□ -0.46
USF1-203ENST00000368021 PEX13Q92968 403 aa12.15□□□□□ -0.46
USF1-203ENST00000368021 EXOC2Q96KP1 924 aa12.15□□□□□ -0.46
USF1-203ENST00000368021 FCRL3Q96P31 734 aaPredicted RBP12.15□□□□□ -0.46
USF1-203ENST00000368021 TDRD1Q9BXT4 1180 aaKnown RBP12.15□□□□□ -0.46
USF1-203ENST00000368021 SLC24A3Q9HC58 644 aa12.15□□□□□ -0.46
USF1-203ENST00000368021 ZFP14Q9HCL3 533 aa12.15□□□□□ -0.46
USF1-203ENST00000368021 SMYD2Q9NRG4 433 aa12.15□□□□□ -0.46
USF1-203ENST00000368021 SORCS3Q9UPU3 1222 aa12.15□□□□□ -0.46
USF1-203ENST00000368021 FCF1Q9Y324 198 aaKnown RBP12.15□□□□□ -0.46
USF1-203ENST00000368021 KIF26AQ9ULI4 1882 aaPredicted RBP12.15□□□□□ -0.46
USF1-203ENST00000368021 HEPACAM2A8MVW5 462 aa12.14□□□□□ -0.47
USF1-203ENST00000368021 ANHXE9PGG2 379 aa12.14□□□□□ -0.47
USF1-203ENST00000368021 NDUFAB1O14561 156 aa12.14□□□□□ -0.47
USF1-203ENST00000368021 PIAS1O75925 651 aa12.14□□□□□ -0.47
USF1-203ENST00000368021 NFATC1O95644 943 aa12.14□□□□□ -0.47
USF1-203ENST00000368021 ADH5P11766 374 aa12.14□□□□□ -0.47
USF1-203ENST00000368021 CNTFP26441 200 aa12.14□□□□□ -0.47
USF1-203ENST00000368021 SERPINB9P50453 376 aa12.14□□□□□ -0.47
USF1-203ENST00000368021 CCNHP51946 323 aaPredicted RBP12.14□□□□□ -0.47
USF1-203ENST00000368021 FCHO2Q0JRZ9 810 aa12.14□□□□□ -0.47
USF1-203ENST00000368021 DYNC1I2Q13409 638 aaKnown RBP12.14□□□□□ -0.47
USF1-203ENST00000368021 GRM2Q14416 872 aa12.14□□□□□ -0.47
USF1-203ENST00000368021 SKIDA1Q1XH10 827 aa12.14□□□□□ -0.47
USF1-203ENST00000368021 LGSNQ5TDP6 509 aa12.14□□□□□ -0.47
USF1-203ENST00000368021 PDPK2PQ6A1A2 396 aa12.14□□□□□ -0.47
USF1-203ENST00000368021 ASTLQ6HA08 431 aaPredicted RBP12.14□□□□□ -0.47
USF1-203ENST00000368021 NCEH1Q6PIU2 408 aa12.14□□□□□ -0.47
USF1-203ENST00000368021 SLC30A9Q6PML9 568 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms