RNA–Protein interactions for RNA: ENST00000319234.4

SHISA3-201, Transcript of shisa family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHISA3, Length 1,971 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA3-201ENST00000319234 SP100P23497 879 aaPredicted RBP18.39■□□□□ 0.53
SHISA3-201ENST00000319234 CREMQ03060 361 aa18.39■□□□□ 0.53
SHISA3-201ENST00000319234 GNA12Q03113 381 aa18.39■□□□□ 0.53
SHISA3-201ENST00000319234 KDELC2Q7Z4H8 507 aa18.39■□□□□ 0.53
SHISA3-201ENST00000319234 KBTBD2Q8IY47 623 aa18.39■□□□□ 0.53
SHISA3-201ENST00000319234 PLD6Q8N2A8 252 aaKnown RBP18.39■□□□□ 0.53
SHISA3-201ENST00000319234 PGBD5Q8N414 524 aa18.39■□□□□ 0.53
SHISA3-201ENST00000319234 ARRDC2Q8TBH0 407 aa18.39■□□□□ 0.53
SHISA3-201ENST00000319234 GATA6Q92908 595 aa18.39■□□□□ 0.53
SHISA3-201ENST00000319234 ATXN3LQ9H3M9 355 aa18.39■□□□□ 0.53
SHISA3-201ENST00000319234 PDFQ9HBH1 243 aa18.39■□□□□ 0.53
SHISA3-201ENST00000319234 NMRAL1Q9HBL8 299 aa18.39■□□□□ 0.53
SHISA3-201ENST00000319234 IL23AQ9NPF7 189 aa18.39■□□□□ 0.53
SHISA3-201ENST00000319234 ZNF358Q9NW07 568 aa18.39■□□□□ 0.53
SHISA3-201ENST00000319234 STK39Q9UEW8 545 aa18.39■□□□□ 0.53
SHISA3-201ENST00000319234 TEX28O15482 410 aa18.39■□□□□ 0.53
SHISA3-201ENST00000319234 CLDN11O75508 207 aa18.39■□□□□ 0.53
SHISA3-201ENST00000319234 C2P06681 752 aa18.39■□□□□ 0.53
SHISA3-201ENST00000319234 ETFBP38117 255 aa18.39■□□□□ 0.53
SHISA3-201ENST00000319234 CHRNA4P43681 627 aa18.39■□□□□ 0.53
SHISA3-201ENST00000319234 NUMBP49757 651 aa18.39■□□□□ 0.53
SHISA3-201ENST00000319234 CSRP3P50461 194 aa18.39■□□□□ 0.53
SHISA3-201ENST00000319234 OTOP2Q7RTS6 562 aa18.39■□□□□ 0.53
SHISA3-201ENST00000319234 DDX50Q9BQ39 737 aaKnown RBP18.39■□□□□ 0.53
SHISA3-201ENST00000319234 PRKD2Q9BZL6 878 aa18.39■□□□□ 0.53
SHISA3-201ENST00000319234 VCX3BQ9H321 246 aa18.39■□□□□ 0.53
SHISA3-201ENST00000319234 CCDC78A2IDD5 438 aa18.38■□□□□ 0.53
SHISA3-201ENST00000319234 RPS24P62847 133 aaKnown RBP18.38■□□□□ 0.53
SHISA3-201ENST00000319234 ADGRF1Q5T601 910 aa18.38■□□□□ 0.53
SHISA3-201ENST00000319234 ESRP1Q6NXG1 681 aaKnown RBP18.38■□□□□ 0.53
SHISA3-201ENST00000319234 CHST9Q7L1S5 443 aa18.38■□□□□ 0.53
SHISA3-201ENST00000319234 TMEM150AQ86TG1 271 aa18.38■□□□□ 0.53
SHISA3-201ENST00000319234 ITIH5Q86UX2 942 aa18.38■□□□□ 0.53
SHISA3-201ENST00000319234 SLC25A41Q8N5S1 370 aa18.38■□□□□ 0.53
SHISA3-201ENST00000319234 UCMAQ8WVF2 138 aa18.38■□□□□ 0.53
SHISA3-201ENST00000319234 VPS39Q96JC1 886 aa18.38■□□□□ 0.53
SHISA3-201ENST00000319234 PRICKLE1Q96MT3 831 aaPredicted RBP18.38■□□□□ 0.53
SHISA3-201ENST00000319234 RANBP9Q96S59 729 aa18.38■□□□□ 0.53
SHISA3-201ENST00000319234 GPR22Q99680 433 aa18.38■□□□□ 0.53
SHISA3-201ENST00000319234 ECSITQ9BQ95 431 aa18.38■□□□□ 0.53
SHISA3-201ENST00000319234 COG4Q9H9E3 785 aa18.38■□□□□ 0.53
SHISA3-201ENST00000319234 TREX1Q9NSU2 369 aa18.38■□□□□ 0.53
SHISA3-201ENST00000319234 CDH22Q9UJ99 828 aa18.38■□□□□ 0.53
SHISA3-201ENST00000319234 AGO1Q9UL18 857 aaKnown RBP18.38■□□□□ 0.53
SHISA3-201ENST00000319234 ARHGAP26Q9UNA1 814 aa18.38■□□□□ 0.53
SHISA3-201ENST00000319234 A0A0D9SEW6 157 aa18.37■□□□□ 0.53
SHISA3-201ENST00000319234 F11P03951 625 aa18.37■□□□□ 0.53
SHISA3-201ENST00000319234 IRF1P10914 325 aa18.37■□□□□ 0.53
SHISA3-201ENST00000319234 PAMP19021 973 aa18.37■□□□□ 0.53
SHISA3-201ENST00000319234 NCF2P19878 526 aaPredicted RBP18.37■□□□□ 0.53
SHISA3-201ENST00000319234 ARCN1P48444 511 aaKnown RBP18.37■□□□□ 0.53
SHISA3-201ENST00000319234 SERPINH1P50454 418 aaKnown RBP18.37■□□□□ 0.53
SHISA3-201ENST00000319234 XIAPP98170 497 aa18.37■□□□□ 0.53
SHISA3-201ENST00000319234 ZNF235Q14590 738 aa18.37■□□□□ 0.53
SHISA3-201ENST00000319234 CNTN4Q8IWV2 1026 aa18.37■□□□□ 0.53
SHISA3-201ENST00000319234 TNS4Q8IZW8 715 aa18.37■□□□□ 0.53
SHISA3-201ENST00000319234 POU5F2Q8N7G0 328 aa18.37■□□□□ 0.53
SHISA3-201ENST00000319234 ZNF781Q8N8C0 355 aa18.37■□□□□ 0.53
SHISA3-201ENST00000319234 TSNARE1Q96NA8 513 aa18.37■□□□□ 0.53
SHISA3-201ENST00000319234 TTC1Q99614 292 aa18.37■□□□□ 0.53
SHISA3-201ENST00000319234 LBHD1Q9BQE6 289 aaPredicted RBP18.37■□□□□ 0.53
SHISA3-201ENST00000319234 RTKNQ9BST9 563 aa18.37■□□□□ 0.53
SHISA3-201ENST00000319234 CCDC28BQ9BUN5 200 aa18.37■□□□□ 0.53
SHISA3-201ENST00000319234 POLR1EQ9GZS1 481 aaKnown RBP18.37■□□□□ 0.53
SHISA3-201ENST00000319234 ZBP1Q9H171 429 aa18.37■□□□□ 0.53
SHISA3-201ENST00000319234 OXSMQ9NWU1 459 aa18.37■□□□□ 0.53
SHISA3-201ENST00000319234 DLGAP2Q9P1A6 1054 aa18.37■□□□□ 0.53
SHISA3-201ENST00000319234 PPM1HQ9ULR3 514 aa18.37■□□□□ 0.53
SHISA3-201ENST00000319234 SSX2IPQ9Y2D8 614 aa18.37■□□□□ 0.53
SHISA3-201ENST00000319234 HEATR9A2RTY3 570 aa18.37■□□□□ 0.53
SHISA3-201ENST00000319234 EIF4E1BA6NMX2 242 aaKnown RBP18.37■□□□□ 0.53
SHISA3-201ENST00000319234 GOLGA8TH3BQL2 631 aa18.37■□□□□ 0.53
SHISA3-201ENST00000319234 SLC22A2O15244 555 aa18.37■□□□□ 0.53
SHISA3-201ENST00000319234 FGF18O76093 207 aa18.37■□□□□ 0.53
SHISA3-201ENST00000319234 MBL2P11226 248 aaPredicted RBP18.37■□□□□ 0.53
SHISA3-201ENST00000319234 HOXD9P28356 352 aaPredicted RBP18.37■□□□□ 0.53
SHISA3-201ENST00000319234 POLD2P49005 469 aa18.37■□□□□ 0.53
SHISA3-201ENST00000319234 IHHQ14623 411 aa18.37■□□□□ 0.53
SHISA3-201ENST00000319234 PABPC1LQ4VXU2 614 aaKnown RBP18.37■□□□□ 0.53
SHISA3-201ENST00000319234 IL31Q6EBC2 164 aa18.37■□□□□ 0.53
SHISA3-201ENST00000319234 KIAA0930Q6ICG6 404 aaPredicted RBP18.37■□□□□ 0.53
SHISA3-201ENST00000319234 OR52E8Q6IFG1 317 aa18.37■□□□□ 0.53
SHISA3-201ENST00000319234 IZUMO2Q6UXV1 221 aa18.37■□□□□ 0.53
SHISA3-201ENST00000319234 ZYG11AQ6WRX3 759 aa18.37■□□□□ 0.53
SHISA3-201ENST00000319234 DHDDSQ86SQ9 333 aa18.37■□□□□ 0.53
SHISA3-201ENST00000319234 HERC6Q8IVU3 1022 aa18.37■□□□□ 0.53
SHISA3-201ENST00000319234 TDRD5Q8NAT2 981 aaKnown RBP18.37■□□□□ 0.53
SHISA3-201ENST00000319234 OR7D4Q8NG98 312 aa18.37■□□□□ 0.53
SHISA3-201ENST00000319234 WBP2Q969T9 261 aa18.37■□□□□ 0.53
SHISA3-201ENST00000319234 ATXN7L3BQ96GX2 97 aa18.37■□□□□ 0.53
SHISA3-201ENST00000319234 ILKAPQ9H0C8 392 aaPredicted RBP18.37■□□□□ 0.53
SHISA3-201ENST00000319234 RHOJQ9H4E5 214 aa18.37■□□□□ 0.53
SHISA3-201ENST00000319234 ZNF334Q9HCZ1 680 aaPredicted RBP18.37■□□□□ 0.53
SHISA3-201ENST00000319234 ZDHHC7Q9NXF8 308 aa18.37■□□□□ 0.53
SHISA3-201ENST00000319234 PDP2Q9P2J9 529 aa18.37■□□□□ 0.53
SHISA3-201ENST00000319234 STOML2Q9UJZ1 356 aa18.37■□□□□ 0.53
SHISA3-201ENST00000319234 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP18.36■□□□□ 0.53
SHISA3-201ENST00000319234 LOC285095A0A1B0GVY8 99 aa18.36■□□□□ 0.53
SHISA3-201ENST00000319234 ILVBLA1L0T0 632 aa18.36■□□□□ 0.53
SHISA3-201ENST00000319234 BUD23O43709 281 aaKnown RBP18.36■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms