RNA–Protein interactions for RNA: ENST00000298564.14

TSPAN17-201, Transcript of tetraspanin 17, humanhuman

TSL 2 BASIC

Gene TSPAN17, Length 2,810 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN17-201ENST00000298564 DENND6AQ8IWF6 608 aa17.94■□□□□ 0.46
TSPAN17-201ENST00000298564 TMEM151AQ8N4L1 468 aa17.94■□□□□ 0.46
TSPAN17-201ENST00000298564 DQX1Q8TE96 717 aaKnown RBP17.94■□□□□ 0.46
TSPAN17-201ENST00000298564 NXNL1Q96CM4 212 aa17.94■□□□□ 0.46
TSPAN17-201ENST00000298564 LRCH3Q96II8 777 aa17.94■□□□□ 0.46
TSPAN17-201ENST00000298564 TEKT5Q96M29 485 aa17.94■□□□□ 0.46
TSPAN17-201ENST00000298564 BRD8Q9H0E9 1235 aa17.94■□□□□ 0.46
TSPAN17-201ENST00000298564 AURKCQ9UQB9 309 aa17.94■□□□□ 0.46
TSPAN17-201ENST00000298564 MTSS1O43312 755 aa17.93■□□□□ 0.46
TSPAN17-201ENST00000298564 CTGFP29279 349 aa17.93■□□□□ 0.46
TSPAN17-201ENST00000298564 LRRC8EQ6NSJ5 796 aa17.93■□□□□ 0.46
TSPAN17-201ENST00000298564 HMBOX1Q6NT76 420 aa17.93■□□□□ 0.46
TSPAN17-201ENST00000298564 ZNF554Q86TJ5 538 aa17.93■□□□□ 0.46
TSPAN17-201ENST00000298564 CNTD1Q8N815 330 aa17.93■□□□□ 0.46
TSPAN17-201ENST00000298564 FTHL17Q9BXU8 183 aa17.93■□□□□ 0.46
TSPAN17-201ENST00000298564 SOX17Q9H6I2 414 aaPredicted RBP17.93■□□□□ 0.46
TSPAN17-201ENST00000298564 PADI3Q9ULW8 664 aa17.93■□□□□ 0.46
TSPAN17-201ENST00000298564 PCDHGA7Q9Y5G6 932 aa17.93■□□□□ 0.46
TSPAN17-201ENST00000298564 SHROOM3Q8TF72 1996 aa17.93■□□□□ 0.46
TSPAN17-201ENST00000298564 DFFAO00273 331 aa17.93■□□□□ 0.46
TSPAN17-201ENST00000298564 GPR182O15218 404 aa17.93■□□□□ 0.46
TSPAN17-201ENST00000298564 AKAP10O43572 662 aa17.93■□□□□ 0.46
TSPAN17-201ENST00000298564 DLX3O60479 287 aa17.93■□□□□ 0.46
TSPAN17-201ENST00000298564 THPOP40225 353 aa17.93■□□□□ 0.46
TSPAN17-201ENST00000298564 AGKQ53H12 422 aa17.93■□□□□ 0.46
TSPAN17-201ENST00000298564 FAM171BQ6P995 826 aa17.93■□□□□ 0.46
TSPAN17-201ENST00000298564 ELMSAN1Q6PJG2 1045 aa17.93■□□□□ 0.46
TSPAN17-201ENST00000298564 DCLRE1AQ6PJP8 1040 aa17.93■□□□□ 0.46
TSPAN17-201ENST00000298564 RMND5BQ96G75 393 aaPredicted RBP17.93■□□□□ 0.46
TSPAN17-201ENST00000298564 ACBD6Q9BR61 282 aa17.93■□□□□ 0.46
TSPAN17-201ENST00000298564 DRC3Q9H069 523 aa17.93■□□□□ 0.46
TSPAN17-201ENST00000298564 ARMC7Q9H6L4 198 aa17.93■□□□□ 0.46
TSPAN17-201ENST00000298564 MYRFQ9Y2G1 1151 aa17.93■□□□□ 0.46
TSPAN17-201ENST00000298564 ERI2A8K979 691 aaKnown RBP17.92■□□□□ 0.46
TSPAN17-201ENST00000298564 ZNF23P17027 643 aa17.92■□□□□ 0.46
TSPAN17-201ENST00000298564 RPL26P61254 145 aaKnown RBP17.92■□□□□ 0.46
TSPAN17-201ENST00000298564 YBX1P67809 324 aaKnown RBP17.92■□□□□ 0.46
TSPAN17-201ENST00000298564 MPP1Q00013 466 aa17.92■□□□□ 0.46
TSPAN17-201ENST00000298564 ZBTB49Q6ZSB9 765 aa17.92■□□□□ 0.46
TSPAN17-201ENST00000298564 SERINC5Q86VE9 423 aa17.92■□□□□ 0.46
TSPAN17-201ENST00000298564 METTL23Q86XA0 190 aa17.92■□□□□ 0.46
TSPAN17-201ENST00000298564 RASAL3Q86YV0 1011 aa17.92■□□□□ 0.46
TSPAN17-201ENST00000298564 RBM12BQ8IXT5 1001 aaKnown RBP17.92■□□□□ 0.46
TSPAN17-201ENST00000298564 CATSPER1Q8NEC5 780 aa17.92■□□□□ 0.46
TSPAN17-201ENST00000298564 OR10T2Q8NGX3 314 aa17.92■□□□□ 0.46
TSPAN17-201ENST00000298564 FNDC8Q8TC99 324 aa17.92■□□□□ 0.46
TSPAN17-201ENST00000298564 GIPC3Q8TF64 312 aa17.92■□□□□ 0.46
TSPAN17-201ENST00000298564 SOCS4Q8WXH5 440 aa17.92■□□□□ 0.46
TSPAN17-201ENST00000298564 NAA50Q9GZZ1 169 aaKnown RBP17.92■□□□□ 0.46
TSPAN17-201ENST00000298564 PAIP1Q9H074 479 aaKnown RBP17.92■□□□□ 0.46
TSPAN17-201ENST00000298564 F8W810 466 aa17.92■□□□□ 0.46
TSPAN17-201ENST00000298564 YAP1P46937 504 aaKnown RBP17.92■□□□□ 0.46
TSPAN17-201ENST00000298564 NUMBP49757 651 aa17.92■□□□□ 0.46
TSPAN17-201ENST00000298564 LIPMQ5VYY2 423 aa17.92■□□□□ 0.46
TSPAN17-201ENST00000298564 CLEC14AQ86T13 490 aa17.92■□□□□ 0.46
TSPAN17-201ENST00000298564 CEP97Q8IW35 865 aa17.92■□□□□ 0.46
TSPAN17-201ENST00000298564 SPATA22Q8NHS9 363 aa17.92■□□□□ 0.46
TSPAN17-201ENST00000298564 EGFL7Q9UHF1 273 aa17.92■□□□□ 0.46
TSPAN17-201ENST00000298564 GMEB1Q9Y692 573 aa17.92■□□□□ 0.46
TSPAN17-201ENST00000298564 H3BNH8 94 aa17.91■□□□□ 0.46
TSPAN17-201ENST00000298564 VARSP26640 1264 aaKnown RBP17.91■□□□□ 0.46
TSPAN17-201ENST00000298564 NPY2RP49146 381 aa17.91■□□□□ 0.46
TSPAN17-201ENST00000298564 CBX3Q13185 183 aa17.91■□□□□ 0.46
TSPAN17-201ENST00000298564 OGFOD2Q6N063 350 aa17.91■□□□□ 0.46
TSPAN17-201ENST00000298564 CNSTQ6PJW8 725 aa17.91■□□□□ 0.46
TSPAN17-201ENST00000298564 CD300LGQ6UXG3 332 aa17.91■□□□□ 0.46
TSPAN17-201ENST00000298564 MRPL10Q7Z7H8 261 aaKnown RBP17.91■□□□□ 0.46
TSPAN17-201ENST00000298564 ERI1Q8IV48 349 aaKnown RBP17.91■□□□□ 0.46
TSPAN17-201ENST00000298564 CANT1Q8WVQ1 401 aa17.91■□□□□ 0.46
TSPAN17-201ENST00000298564 SREK1Q8WXA9 508 aaKnown RBP17.91■□□□□ 0.46
TSPAN17-201ENST00000298564 IRGQQ8WZA9 623 aa17.91■□□□□ 0.46
TSPAN17-201ENST00000298564 DPF3Q92784 378 aa17.91■□□□□ 0.46
TSPAN17-201ENST00000298564 CNDP1Q96KN2 507 aa17.91■□□□□ 0.46
TSPAN17-201ENST00000298564 VAT1Q99536 393 aa17.91■□□□□ 0.46
TSPAN17-201ENST00000298564 PLK2Q9NYY3 685 aa17.91■□□□□ 0.46
TSPAN17-201ENST00000298564 ADAM28Q9UKQ2 775 aa17.91■□□□□ 0.46
TSPAN17-201ENST00000298564 KPNA6O60684 536 aa17.91■□□□□ 0.46
TSPAN17-201ENST00000298564 ITGB1P05556 798 aa17.91■□□□□ 0.46
TSPAN17-201ENST00000298564 GABRB3P28472 473 aa17.91■□□□□ 0.46
TSPAN17-201ENST00000298564 GRIA3P42263 894 aa17.91■□□□□ 0.46
TSPAN17-201ENST00000298564 MAGEA12P43365 314 aa17.91■□□□□ 0.46
TSPAN17-201ENST00000298564 PGFP49763 221 aa17.91■□□□□ 0.46
TSPAN17-201ENST00000298564 CDK9P50750 372 aaKnown RBP17.91■□□□□ 0.46
TSPAN17-201ENST00000298564 MGAT3Q09327 533 aa17.91■□□□□ 0.46
TSPAN17-201ENST00000298564 TRIM25Q14258 630 aaKnown RBP17.91■□□□□ 0.46
TSPAN17-201ENST00000298564 OFCC1Q8IZS5 231 aa17.91■□□□□ 0.46
TSPAN17-201ENST00000298564 FIBCD1Q8N539 461 aa17.91■□□□□ 0.46
TSPAN17-201ENST00000298564 HMGCLL1Q8TB92 370 aa17.91■□□□□ 0.46
TSPAN17-201ENST00000298564 IL22Q9GZX6 179 aa17.91■□□□□ 0.46
TSPAN17-201ENST00000298564 FBRSL1Q9HCM7 1045 aaKnown RBP17.91■□□□□ 0.46
TSPAN17-201ENST00000298564 MAGEB16A2A368 324 aa17.9■□□□□ 0.46
TSPAN17-201ENST00000298564 MANSC4A6NHS7 340 aaPredicted RBP17.9■□□□□ 0.46
TSPAN17-201ENST00000298564 TMEM114B3SHH9 223 aa17.9■□□□□ 0.46
TSPAN17-201ENST00000298564 FBP2O00757 339 aa17.9■□□□□ 0.46
TSPAN17-201ENST00000298564 HTRA2O43464 458 aaPredicted RBP17.9■□□□□ 0.46
TSPAN17-201ENST00000298564 ZNF189O75820 626 aaPredicted RBP17.9■□□□□ 0.46
TSPAN17-201ENST00000298564 MT-CYBP00156 380 aaPredicted RBP17.9■□□□□ 0.46
TSPAN17-201ENST00000298564 MT-ND1P03886 318 aa17.9■□□□□ 0.46
TSPAN17-201ENST00000298564 CD247P20963 164 aa17.9■□□□□ 0.46
TSPAN17-201ENST00000298564 ISL2Q96A47 359 aa17.9■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms