RNA–Protein interactions for RNA: ENST00000258772.9

DDX56-201, Transcript of DEAD-box helicase 56, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX56, Length 2,336 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-201ENST00000258772 PNPLA1Q8N8W4 532 aa15.33■□□□□ 0.05
DDX56-201ENST00000258772 HASPINQ8TF76 798 aa15.33■□□□□ 0.05
DDX56-201ENST00000258772 ATP6V1E2Q96A05 226 aa15.33■□□□□ 0.05
DDX56-201ENST00000258772 DGCR14Q96DF8 476 aaKnown RBP15.33■□□□□ 0.05
DDX56-201ENST00000258772 PHF21BQ96EK2 531 aa15.33■□□□□ 0.05
DDX56-201ENST00000258772 PCDHAC1Q9H158 963 aa15.33■□□□□ 0.05
DDX56-201ENST00000258772 MRPL40Q9NQ50 206 aaKnown RBP15.33■□□□□ 0.05
DDX56-201ENST00000258772 CACNA2D2Q9NY47 1150 aa15.33■□□□□ 0.05
DDX56-201ENST00000258772 CCDC167Q9P0B6 97 aa15.33■□□□□ 0.05
DDX56-201ENST00000258772 SUCOQ9UBS9 1254 aaKnown RBP15.33■□□□□ 0.05
DDX56-201ENST00000258772 SARDHQ9UL12 918 aa15.33■□□□□ 0.05
DDX56-201ENST00000258772 GPC4O75487 556 aa15.33■□□□□ 0.04
DDX56-201ENST00000258772 CHRNA1P02708 482 aa15.33■□□□□ 0.04
DDX56-201ENST00000258772 HSPA13P48723 471 aa15.33■□□□□ 0.04
DDX56-201ENST00000258772 SERPINH1P50454 418 aaKnown RBP15.33■□□□□ 0.04
DDX56-201ENST00000258772 CLCN2P51788 898 aa15.33■□□□□ 0.04
DDX56-201ENST00000258772 MLLT6P55198 1093 aaPredicted RBP15.33■□□□□ 0.04
DDX56-201ENST00000258772 CDKL1Q00532 357 aa15.33■□□□□ 0.04
DDX56-201ENST00000258772 MYBPC1Q00872 1141 aa15.33■□□□□ 0.04
DDX56-201ENST00000258772 GALNT1Q10472 559 aaPredicted RBP15.33■□□□□ 0.04
DDX56-201ENST00000258772 FASTKQ14296 549 aaKnown RBP15.33■□□□□ 0.04
DDX56-201ENST00000258772 C6orf52Q5T4I8 152 aa15.33■□□□□ 0.04
DDX56-201ENST00000258772 HECTD2Q5U5R9 776 aa15.33■□□□□ 0.04
DDX56-201ENST00000258772 OVOS1Q6IE37 1185 aa15.33■□□□□ 0.04
DDX56-201ENST00000258772 PAOXQ6QHF9 649 aa15.33■□□□□ 0.04
DDX56-201ENST00000258772 ISLR2Q6UXK2 745 aa15.33■□□□□ 0.04
DDX56-201ENST00000258772 ANKRD49Q8WVL7 239 aa15.33■□□□□ 0.04
DDX56-201ENST00000258772 TSPAN17Q96FV3 270 aa15.33■□□□□ 0.04
DDX56-201ENST00000258772 NOL6Q9H6R4 1146 aaKnown RBP15.33■□□□□ 0.04
DDX56-201ENST00000258772 ATP13A1Q9HD20 1204 aa15.33■□□□□ 0.04
DDX56-201ENST00000258772 OSER1Q9NX31 292 aa15.33■□□□□ 0.04
DDX56-201ENST00000258772 CNOT11Q9UKZ1 510 aaKnown RBP15.33■□□□□ 0.04
DDX56-201ENST00000258772 TLL2Q9Y6L7 1015 aa15.33■□□□□ 0.04
DDX56-201ENST00000258772 M0QZQ0 153 aa15.32■□□□□ 0.04
DDX56-201ENST00000258772 TNFRSF10BO14763 440 aa15.32■□□□□ 0.04
DDX56-201ENST00000258772 TNFAIP8O95379 198 aa15.32■□□□□ 0.04
DDX56-201ENST00000258772 PEX11BO96011 259 aa15.32■□□□□ 0.04
DDX56-201ENST00000258772 ZNF26P17031 533 aaPredicted RBP15.32■□□□□ 0.04
DDX56-201ENST00000258772 HDCP19113 662 aa15.32■□□□□ 0.04
DDX56-201ENST00000258772 INHBCP55103 352 aa15.32■□□□□ 0.04
DDX56-201ENST00000258772 MAPRE1Q15691 268 aaKnown RBP15.32■□□□□ 0.04
DDX56-201ENST00000258772 SLC5A9Q2M3M2 681 aa15.32■□□□□ 0.04
DDX56-201ENST00000258772 EML3Q32P44 896 aa15.32■□□□□ 0.04
DDX56-201ENST00000258772 ARMC3Q5W041 872 aa15.32■□□□□ 0.04
DDX56-201ENST00000258772 SPRYD7Q5W111 196 aa15.32■□□□□ 0.04
DDX56-201ENST00000258772 REP15Q6BDI9 236 aa15.32■□□□□ 0.04
DDX56-201ENST00000258772 SLC22A9Q8IVM8 553 aa15.32■□□□□ 0.04
DDX56-201ENST00000258772 OR13J1Q8NGT2 312 aa15.32■□□□□ 0.04
DDX56-201ENST00000258772 GABPB2Q8TAK5 448 aaPredicted RBP15.32■□□□□ 0.04
DDX56-201ENST00000258772 IMP4Q96G21 291 aaKnown RBP15.32■□□□□ 0.04
DDX56-201ENST00000258772 RANBP9Q96S59 729 aa15.32■□□□□ 0.04
DDX56-201ENST00000258772 SENP6Q9GZR1 1112 aaPredicted RBP15.32■□□□□ 0.04
DDX56-201ENST00000258772 ZNF696Q9H7X3 374 aa15.32■□□□□ 0.04
DDX56-201ENST00000258772 PLK2Q9NYY3 685 aa15.32■□□□□ 0.04
DDX56-201ENST00000258772 APPL1Q9UKG1 709 aa15.32■□□□□ 0.04
DDX56-201ENST00000258772 DSEQ9UL01 958 aa15.32■□□□□ 0.04
DDX56-201ENST00000258772 CLEC11AQ9Y240 323 aa15.32■□□□□ 0.04
DDX56-201ENST00000258772 VWA7Q9Y334 891 aa15.32■□□□□ 0.04
DDX56-201ENST00000258772 AP4S1Q9Y587 144 aa15.32■□□□□ 0.04
DDX56-201ENST00000258772 PATJQ8NI35 1801 aa15.32■□□□□ 0.04
DDX56-201ENST00000258772 TDRD15B5MCY1 1934 aaKnown RBP15.32■□□□□ 0.04
DDX56-201ENST00000258772 DOCK4Q8N1I0 1966 aa15.32■□□□□ 0.04
DDX56-201ENST00000258772 TRIM24O15164 1050 aa15.32■□□□□ 0.04
DDX56-201ENST00000258772 C8BP07358 591 aa15.32■□□□□ 0.04
DDX56-201ENST00000258772 GRIK1P39086 918 aa15.32■□□□□ 0.04
DDX56-201ENST00000258772 RENBPP51606 427 aa15.32■□□□□ 0.04
DDX56-201ENST00000258772 MGAT5BQ3V5L5 792 aa15.32■□□□□ 0.04
DDX56-201ENST00000258772 CILP2Q8IUL8 1156 aa15.32■□□□□ 0.04
DDX56-201ENST00000258772 TOP1MTQ969P6 601 aa15.32■□□□□ 0.04
DDX56-201ENST00000258772 MRPS26Q9BYN8 205 aaKnown RBP15.32■□□□□ 0.04
DDX56-201ENST00000258772 GSTO2Q9H4Y5 243 aa15.32■□□□□ 0.04
DDX56-201ENST00000258772 AGO3Q9H9G7 860 aaKnown RBP15.32■□□□□ 0.04
DDX56-201ENST00000258772 NMUR1Q9HB89 426 aa15.32■□□□□ 0.04
DDX56-201ENST00000258772 NT5MQ9NPB1 228 aa15.32■□□□□ 0.04
DDX56-201ENST00000258772 TRAF6Q9Y4K3 522 aa15.32■□□□□ 0.04
DDX56-201ENST00000258772 MYADML2A6NDP7 307 aa15.31■□□□□ 0.04
DDX56-201ENST00000258772 WASH4PA8MWX3 477 aa15.31■□□□□ 0.04
DDX56-201ENST00000258772 PAPSS2O95340 614 aaPredicted RBP15.31■□□□□ 0.04
DDX56-201ENST00000258772 SNRPB2P08579 225 aaKnown RBP15.31■□□□□ 0.04
DDX56-201ENST00000258772 FAM58BPP0C7Q3 252 aa15.31■□□□□ 0.04
DDX56-201ENST00000258772 IMPDH1P20839 514 aa15.31■□□□□ 0.04
DDX56-201ENST00000258772 RHDQ02161 417 aa15.31■□□□□ 0.04
DDX56-201ENST00000258772 NRG1Q02297 640 aaPredicted RBP15.31■□□□□ 0.04
DDX56-201ENST00000258772 TRAP1Q12931 704 aaKnown RBP15.31■□□□□ 0.04
DDX56-201ENST00000258772 IYDQ6PHW0 289 aa15.31■□□□□ 0.04
DDX56-201ENST00000258772 PTAR1Q7Z6K3 402 aaPredicted RBP15.31■□□□□ 0.04
DDX56-201ENST00000258772 GALNT7Q86SF2 657 aa15.31■□□□□ 0.04
DDX56-201ENST00000258772 THEM5Q8N1Q8 247 aa15.31■□□□□ 0.04
DDX56-201ENST00000258772 METTL25Q8N6Q8 603 aa15.31■□□□□ 0.04
DDX56-201ENST00000258772 RSPH1Q8WYR4 309 aa15.31■□□□□ 0.04
DDX56-201ENST00000258772 LPGAT1Q92604 370 aa15.31■□□□□ 0.04
DDX56-201ENST00000258772 NMD3Q96D46 503 aaKnown RBP15.31■□□□□ 0.04
DDX56-201ENST00000258772 PRORSD1PA6NEY8 169 aa15.31■□□□□ 0.04
DDX56-201ENST00000258772 UBFD1O14562 309 aaKnown RBP15.31■□□□□ 0.04
DDX56-201ENST00000258772 VILLO15195 856 aa15.31■□□□□ 0.04
DDX56-201ENST00000258772 CD86P42081 329 aa15.31■□□□□ 0.04
DDX56-201ENST00000258772 KCNC1P48547 511 aa15.31■□□□□ 0.04
DDX56-201ENST00000258772 SH3BGRP55822 239 aaPredicted RBP15.31■□□□□ 0.04
DDX56-201ENST00000258772 MAXP61244 160 aa15.31■□□□□ 0.04
DDX56-201ENST00000258772 TSPY1Q01534 308 aa15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms