RNA–Protein interactions for RNA: ENST00000625891.2

NRXN1-223, Transcript of neurexin 1, human

TSL 4 BASIC

Gene NRXN1, Length 1,164 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NRXN1-223	ENST00000625891	SH3BP5L	Q7L8J4	393 aa		11.62	□□□□□ -0.55
NRXN1-223	ENST00000625891	SOS2	Q07890	1332 aa	Predicted RBP	11.61	□□□□□ -0.55
NRXN1-223	ENST00000625891	FSHR	P23945	695 aa		11.61	□□□□□ -0.55
NRXN1-223	ENST00000625891	NBPF14	Q5TI25	921 aa		11.61	□□□□□ -0.55
NRXN1-223	ENST00000625891	TRMT44	Q8IYL2	757 aa	Known RBP	11.61	□□□□□ -0.55
NRXN1-223	ENST00000625891	RTL5	Q5HYW3	569 aa	Predicted RBP	11.6	□□□□□ -0.55
NRXN1-223	ENST00000625891	VASH1	Q7L8A9	365 aa	Predicted RBP	11.6	□□□□□ -0.55
NRXN1-223	ENST00000625891	DNMT3L	Q9UJW3	386 aa		11.6	□□□□□ -0.55
NRXN1-223	ENST00000625891	RFC5	P40937	340 aa		11.59	□□□□□ -0.55
NRXN1-223	ENST00000625891	HELB	Q8NG08	1087 aa	Predicted RBP	11.59	□□□□□ -0.55
NRXN1-223	ENST00000625891	EMILIN1	Q9Y6C2	1016 aa		11.58	□□□□□ -0.56
NRXN1-223	ENST00000625891	MAGEB6P1	A0A0J9YX57	407 aa		11.57	□□□□□ -0.56
NRXN1-223	ENST00000625891	TSEN34	Q9BSV6	310 aa	Known RBP	11.57	□□□□□ -0.56
NRXN1-223	ENST00000625891	CCDC116	Q8IYX3	515 aa		11.56	□□□□□ -0.56
NRXN1-223	ENST00000625891	GPKOW	Q92917	476 aa	Predicted RBP eCLIP	11.55	□□□□□ -0.56
NRXN1-223	ENST00000625891	ATP1B4	Q9UN42	357 aa	Predicted RBP	11.55	□□□□□ -0.56
NRXN1-223	ENST00000625891	TIMELESS	Q9UNS1	1208 aa		11.54	□□□□□ -0.56
NRXN1-223	ENST00000625891	ERFE	Q4G0M1	354 aa		11.53	□□□□□ -0.56
NRXN1-223	ENST00000625891	CARD14	Q9BXL6	1004 aa		11.53	□□□□□ -0.56
NRXN1-223	ENST00000625891	ZNF800	Q2TB10	664 aa	Predicted RBP eCLIP	11.52	□□□□□ -0.57
NRXN1-223	ENST00000625891	TTLL8	A6PVC2	850 aa		11.51	□□□□□ -0.57
NRXN1-223	ENST00000625891	TMEM259	Q4ZIN3	620 aa		11.51	□□□□□ -0.57
NRXN1-223	ENST00000625891	GPR161	Q8N6U8	529 aa	Known RBP	11.51	□□□□□ -0.57
NRXN1-223	ENST00000625891	CTDSPL2	Q05D32	466 aa		11.5	□□□□□ -0.57
NRXN1-223	ENST00000625891	PPP1R26	Q5T8A7	1209 aa	Predicted RBP	11.5	□□□□□ -0.57
NRXN1-223	ENST00000625891	BANK1	Q8NDB2	785 aa		11.5	□□□□□ -0.57
NRXN1-223	ENST00000625891	KRT76	Q01546	638 aa		11.49	□□□□□ -0.57
NRXN1-223	ENST00000625891	PTS	Q03393	145 aa		11.49	□□□□□ -0.57
NRXN1-223	ENST00000625891	KCNMA1	Q12791	1236 aa		11.49	□□□□□ -0.57
NRXN1-223	ENST00000625891	FLII	Q13045	1269 aa		11.49	□□□□□ -0.57
NRXN1-223	ENST00000625891	MCM6	Q14566	821 aa		11.49	□□□□□ -0.57
NRXN1-223	ENST00000625891		Q6ZVU0	165 aa		11.49	□□□□□ -0.57
NRXN1-223	ENST00000625891	CBLB	Q13191	982 aa		11.48	□□□□□ -0.57
NRXN1-223	ENST00000625891	PGPEP1	Q9NXJ5	209 aa		11.48	□□□□□ -0.57
NRXN1-223	ENST00000625891	SPINT1	O43278	529 aa		11.47	□□□□□ -0.57
NRXN1-223	ENST00000625891	PDXDC2P	Q6P474	469 aa		11.47	□□□□□ -0.57
NRXN1-223	ENST00000625891	FIGNL2	A6NMB9	653 aa		11.46	□□□□□ -0.57
NRXN1-223	ENST00000625891	GSK3A	P49840	483 aa		11.46	□□□□□ -0.57
NRXN1-223	ENST00000625891	ARHGAP9	Q9BRR9	750 aa		11.46	□□□□□ -0.57
NRXN1-223	ENST00000625891	NANOS1	Q8WY41	292 aa	Known RBP	11.45	□□□□□ -0.58
NRXN1-223	ENST00000625891	CNTNAP3B	Q96NU0	1288 aa		11.45	□□□□□ -0.58
NRXN1-223	ENST00000625891	CNTNAP3	Q9BZ76	1288 aa		11.45	□□□□□ -0.58
NRXN1-223	ENST00000625891	SNRK	Q9NRH2	765 aa		11.45	□□□□□ -0.58
NRXN1-223	ENST00000625891	FKBPL	Q9UIM3	349 aa		11.45	□□□□□ -0.58
NRXN1-223	ENST00000625891	AP1G2	O75843	785 aa		11.44	□□□□□ -0.58
NRXN1-223	ENST00000625891	ERICH6	Q7L0X2	663 aa		11.44	□□□□□ -0.58
NRXN1-223	ENST00000625891	LRRN4	Q8WUT4	740 aa		11.44	□□□□□ -0.58
NRXN1-223	ENST00000625891	KCTD15	Q96SI1	283 aa	Predicted RBP	11.44	□□□□□ -0.58
NRXN1-223	ENST00000625891	CDV3	Q9UKY7	258 aa	Known RBP	11.44	□□□□□ -0.58
NRXN1-223	ENST00000625891	SOCS7	O14512	581 aa		11.43	□□□□□ -0.58
NRXN1-223	ENST00000625891	USP17L8	P0C7I0	530 aa		11.43	□□□□□ -0.58
NRXN1-223	ENST00000625891	C14orf37	Q86TY3	774 aa		11.43	□□□□□ -0.58
NRXN1-223	ENST00000625891	CCDC155	Q8N6L0	562 aa		11.43	□□□□□ -0.58
NRXN1-223	ENST00000625891	MTMR14	Q8NCE2	650 aa		11.43	□□□□□ -0.58
NRXN1-223	ENST00000625891	LOC100996750	A0A140TA64	210 aa		11.42	□□□□□ -0.58
NRXN1-223	ENST00000625891	SLC10A4	Q96EP9	437 aa		11.42	□□□□□ -0.58
NRXN1-223	ENST00000625891	KRTAP4-6	Q9BYQ5	205 aa		11.42	□□□□□ -0.58
NRXN1-223	ENST00000625891	COL25A1	Q9BXS0	654 aa	Predicted RBP	11.41	□□□□□ -0.58
NRXN1-223	ENST00000625891	SLC35F4	A4IF30	521 aa		11.4	□□□□□ -0.58
NRXN1-223	ENST00000625891	DHX9	Q08211	1270 aa	Known RBP	11.4	□□□□□ -0.58
NRXN1-223	ENST00000625891	ZBTB33	Q86T24	672 aa		11.4	□□□□□ -0.58
NRXN1-223	ENST00000625891	ZC3H4	Q9UPT8	1303 aa	Known RBP	11.39	□□□□□ -0.59
NRXN1-223	ENST00000625891	INTS6L	Q5JSJ4	861 aa	Known RBP	11.39	□□□□□ -0.59
NRXN1-223	ENST00000625891	KCTD17	Q8N5Z5	321 aa		11.39	□□□□□ -0.59
NRXN1-223	ENST00000625891	AGBL1	Q96MI9	1066 aa		11.39	□□□□□ -0.59
NRXN1-223	ENST00000625891	OCSTAMP	Q9BR26	566 aa		11.39	□□□□□ -0.59
NRXN1-223	ENST00000625891	ADAMTS8	Q9UP79	889 aa		11.39	□□□□□ -0.59
NRXN1-223	ENST00000625891	NR6A1	Q15406	480 aa		11.38	□□□□□ -0.59
NRXN1-223	ENST00000625891	RNFT1	Q5M7Z0	435 aa		11.38	□□□□□ -0.59
NRXN1-223	ENST00000625891	GJD4	Q96KN9	370 aa	Predicted RBP	11.38	□□□□□ -0.59
NRXN1-223	ENST00000625891	HMX1	Q9NP08	348 aa	Predicted RBP	11.38	□□□□□ -0.59
NRXN1-223	ENST00000625891	NISCH	Q9Y2I1	1504 aa		11.38	□□□□□ -0.59
NRXN1-223	ENST00000625891	CTSO	P43234	321 aa	Predicted RBP	11.37	□□□□□ -0.59
NRXN1-223	ENST00000625891	ITGA6	P23229	1130 aa		11.36	□□□□□ -0.59
NRXN1-223	ENST00000625891	RELB	Q01201	579 aa		11.36	□□□□□ -0.59
NRXN1-223	ENST00000625891	RASSF7	Q02833	373 aa		11.36	□□□□□ -0.59
NRXN1-223	ENST00000625891	INSM2	Q96T92	566 aa	Predicted RBP	11.36	□□□□□ -0.59
NRXN1-223	ENST00000625891	PTK2	Q05397	1052 aa		11.35	□□□□□ -0.59
NRXN1-223	ENST00000625891	ZNF385C	Q66K41	422 aa	Predicted RBP	11.35	□□□□□ -0.59
NRXN1-223	ENST00000625891	VWA5B2	Q8N398	1253 aa		11.35	□□□□□ -0.59
NRXN1-223	ENST00000625891	TMEM151A	Q8N4L1	468 aa		11.35	□□□□□ -0.59
NRXN1-223	ENST00000625891	TRIM34	Q9BYJ4	488 aa		11.35	□□□□□ -0.59
NRXN1-223	ENST00000625891	GPSM3	Q9Y4H4	160 aa		11.35	□□□□□ -0.59
NRXN1-223	ENST00000625891	UBTF	P17480	764 aa	Known RBP	11.34	□□□□□ -0.59
NRXN1-223	ENST00000625891	SUZ12	Q15022	739 aa	Known RBP	11.34	□□□□□ -0.59
NRXN1-223	ENST00000625891	ZMYND15	Q9H091	742 aa		11.34	□□□□□ -0.59
NRXN1-223	ENST00000625891	GDF11	O95390	407 aa		11.33	□□□□□ -0.6
NRXN1-223	ENST00000625891	ADAM32	Q8TC27	787 aa		11.33	□□□□□ -0.6
NRXN1-223	ENST00000625891	CLUAP1	Q96AJ1	413 aa		11.33	□□□□□ -0.6
NRXN1-223	ENST00000625891	POM121	Q96HA1	1249 aa		11.33	□□□□□ -0.6
NRXN1-223	ENST00000625891	RNF225	M0QZC1	329 aa	Predicted RBP	11.32	□□□□□ -0.6
NRXN1-223	ENST00000625891	SLURP2	P0DP57	97 aa		11.32	□□□□□ -0.6
NRXN1-223	ENST00000625891	SV2A	Q7L0J3	742 aa		11.32	□□□□□ -0.6
NRXN1-223	ENST00000625891	RNF217	Q8TC41	542 aa		11.32	□□□□□ -0.6
NRXN1-223	ENST00000625891	TMPRSS4	Q9NRS4	437 aa		11.32	□□□□□ -0.6
NRXN1-223	ENST00000625891	COG6	Q9Y2V7	657 aa		11.32	□□□□□ -0.6
NRXN1-223	ENST00000625891	CDC14C	A4D256	554 aa		11.31	□□□□□ -0.6
NRXN1-223	ENST00000625891	GPR37L1	O60883	481 aa		11.31	□□□□□ -0.6
NRXN1-223	ENST00000625891	SVOP	Q8N4V2	548 aa		11.31	□□□□□ -0.6
NRXN1-223	ENST00000625891	EPS8L1	Q8TE68	723 aa		11.31	□□□□□ -0.6

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